RNA–Protein interactions for RNA: ENST00000601091.5

LIG1-220, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 3,957 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-220ENST00000601091 LNPEPQ9UIQ6 1025 aa10.93□□□□□ -0.66
LIG1-220ENST00000601091 CNOT7Q9UIV1 285 aaKnown RBP10.93□□□□□ -0.66
LIG1-220ENST00000601091 COL14A1Q05707 1796 aaKnown RBP10.93□□□□□ -0.66
LIG1-220ENST00000601091 POLD2P49005 469 aa10.92□□□□□ -0.66
LIG1-220ENST00000601091 YWHAGP61981 247 aaKnown RBP eCLIP10.92□□□□□ -0.66
LIG1-220ENST00000601091 RPS6P62753 249 aaKnown RBP10.92□□□□□ -0.66
LIG1-220ENST00000601091 GPS1Q13098 491 aa10.92□□□□□ -0.66
LIG1-220ENST00000601091 KRT81Q14533 505 aa10.92□□□□□ -0.66
LIG1-220ENST00000601091 SUZ12Q15022 739 aaKnown RBP10.92□□□□□ -0.66
LIG1-220ENST00000601091 SURF1Q15526 300 aa10.92□□□□□ -0.66
LIG1-220ENST00000601091 TJAP1Q5JTD0 557 aa10.92□□□□□ -0.66
LIG1-220ENST00000601091 PHLDB3Q6NSJ2 640 aa10.92□□□□□ -0.66
LIG1-220ENST00000601091 MAP7D3Q8IWC1 876 aa10.92□□□□□ -0.66
LIG1-220ENST00000601091 LRRC34Q8IZ02 419 aa10.92□□□□□ -0.66
LIG1-220ENST00000601091 CDC26Q8NHZ8 85 aa10.92□□□□□ -0.66
LIG1-220ENST00000601091 EPS8L3Q8TE67 593 aaKnown RBP10.92□□□□□ -0.66
LIG1-220ENST00000601091 ANKRD36BP1Q96IX9 119 aa10.92□□□□□ -0.66
LIG1-220ENST00000601091 SERPINB12Q96P63 405 aa10.92□□□□□ -0.66
LIG1-220ENST00000601091 PI4K2AQ9BTU6 479 aa10.92□□□□□ -0.66
LIG1-220ENST00000601091 OSBPL8Q9BZF1 889 aa10.92□□□□□ -0.66
LIG1-220ENST00000601091 C17orf75Q9HAS0 396 aa10.92□□□□□ -0.66
LIG1-220ENST00000601091 TAS2R14Q9NYV8 317 aa10.92□□□□□ -0.66
LIG1-220ENST00000601091 LZTS1Q9Y250 596 aa10.92□□□□□ -0.66
LIG1-220ENST00000601091 ARL2BPQ9Y2Y0 163 aa10.92□□□□□ -0.66
LIG1-220ENST00000601091 C4AP0C0L4 1744 aa10.92□□□□□ -0.66
LIG1-220ENST00000601091 C4BP0C0L5 1744 aa10.92□□□□□ -0.66
LIG1-220ENST00000601091 H7C0C1 242 aa10.92□□□□□ -0.66
LIG1-220ENST00000601091 INO80B-WBP1J3KQ70 363 aa10.92□□□□□ -0.66
LIG1-220ENST00000601091 KIAA0391O15091 583 aaKnown RBP10.92□□□□□ -0.66
LIG1-220ENST00000601091 MED7O43513 233 aa10.92□□□□□ -0.66
LIG1-220ENST00000601091 NR3C2P08235 984 aa10.92□□□□□ -0.66
LIG1-220ENST00000601091 CAP2P40123 477 aa10.92□□□□□ -0.66
LIG1-220ENST00000601091 ATP5OP48047 213 aa10.92□□□□□ -0.66
LIG1-220ENST00000601091 ACOT2P49753 483 aa10.92□□□□□ -0.66
LIG1-220ENST00000601091 ITGA8P53708 1063 aa10.92□□□□□ -0.66
LIG1-220ENST00000601091 BTG3Q14201 252 aaPredicted RBP10.92□□□□□ -0.66
LIG1-220ENST00000601091 KIF22Q14807 665 aa10.92□□□□□ -0.66
LIG1-220ENST00000601091 IGSF11Q5DX21 431 aa10.92□□□□□ -0.66
LIG1-220ENST00000601091 SPDYCQ5MJ68 293 aa10.92□□□□□ -0.66
LIG1-220ENST00000601091 OSTM1Q86WC4 334 aa10.92□□□□□ -0.66
LIG1-220ENST00000601091 ARHGEF19Q8IW93 802 aa10.92□□□□□ -0.66
LIG1-220ENST00000601091 TAAR1Q96RJ0 339 aa10.92□□□□□ -0.66
LIG1-220ENST00000601091 RBM15Q96T37 977 aaKnown RBP eCLIP10.92□□□□□ -0.668e-6■□□□□ 8.4
LIG1-220ENST00000601091 KIFC3Q9BVG8 833 aa10.92□□□□□ -0.66
LIG1-220ENST00000601091 CALN1Q9BXU9 219 aa10.92□□□□□ -0.66
LIG1-220ENST00000601091 IGSF5Q9NSI5 407 aa10.92□□□□□ -0.66
LIG1-220ENST00000601091 VAV3Q9UKW4 847 aa10.92□□□□□ -0.66
LIG1-220ENST00000601091 MCF2LO15068 1137 aa10.92□□□□□ -0.66
LIG1-220ENST00000601091 STAMBPO95630 424 aa10.92□□□□□ -0.66
LIG1-220ENST00000601091 MT-ND3P03897 115 aa10.92□□□□□ -0.66
LIG1-220ENST00000601091 PYGMP11217 842 aa10.92□□□□□ -0.66
LIG1-220ENST00000601091 RNASELQ05823 741 aaKnown RBP10.92□□□□□ -0.66
LIG1-220ENST00000601091 TUBA3CQ13748 450 aa10.92□□□□□ -0.66
LIG1-220ENST00000601091 BZW1Q7L1Q6 419 aaKnown RBP10.92□□□□□ -0.66
LIG1-220ENST00000601091 YTHDF3Q7Z739 585 aaKnown RBP10.92□□□□□ -0.66
LIG1-220ENST00000601091 ZNF677Q86XU0 584 aa10.92□□□□□ -0.66
LIG1-220ENST00000601091 SLC9A9Q8IVB4 645 aa10.92□□□□□ -0.66
LIG1-220ENST00000601091 GALNT15Q8N3T1 639 aa10.92□□□□□ -0.66
LIG1-220ENST00000601091 LRRC57Q8N9N7 239 aa10.92□□□□□ -0.66
LIG1-220ENST00000601091 ZNF75CPQ92670 426 aaPredicted RBP10.92□□□□□ -0.66
LIG1-220ENST00000601091 PGM2Q96G03 612 aa10.92□□□□□ -0.66
LIG1-220ENST00000601091 WDR18Q9BV38 432 aa10.92□□□□□ -0.66
LIG1-220ENST00000601091 MOV10L1Q9BXT6 1211 aaKnown RBP10.92□□□□□ -0.66
LIG1-220ENST00000601091 JPH1Q9HDC5 661 aaPredicted RBP10.92□□□□□ -0.66
LIG1-220ENST00000601091 EFR3BQ9Y2G0 817 aa10.92□□□□□ -0.66
LIG1-220ENST00000601091 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.92□□□□□ -0.66
LIG1-220ENST00000601091 MYH3P11055 1940 aa10.92□□□□□ -0.66
LIG1-220ENST00000601091 TJP1Q07157 1748 aa10.92□□□□□ -0.66
LIG1-220ENST00000601091 SNED1Q8TER0 1413 aa10.92□□□□□ -0.66
LIG1-220ENST00000601091 SRGAP2CP0DJJ0 459 aa10.92□□□□□ -0.66
LIG1-220ENST00000601091 PRKACBP22694 351 aa10.92□□□□□ -0.66
LIG1-220ENST00000601091 PSMA2P25787 234 aa10.92□□□□□ -0.66
LIG1-220ENST00000601091 STXBP2Q15833 593 aa10.92□□□□□ -0.66
LIG1-220ENST00000601091 SLC15A2Q16348 729 aa10.92□□□□□ -0.66
LIG1-220ENST00000601091 HP1BP3Q5SSJ5 553 aaPredicted RBP10.92□□□□□ -0.66
LIG1-220ENST00000601091 TATDN1Q6P1N9 297 aa10.92□□□□□ -0.66
LIG1-220ENST00000601091 KIF2BQ8N4N8 673 aa10.92□□□□□ -0.66
LIG1-220ENST00000601091 TTC13Q8NBP0 860 aa10.92□□□□□ -0.66
LIG1-220ENST00000601091 KCTD6Q8NC69 237 aa10.92□□□□□ -0.66
LIG1-220ENST00000601091 CEP70Q8NHQ1 597 aa10.92□□□□□ -0.66
LIG1-220ENST00000601091 TAS1R2Q8TE23 839 aa10.92□□□□□ -0.66
LIG1-220ENST00000601091 POM121Q96HA1 1249 aa10.92□□□□□ -0.66
LIG1-220ENST00000601091 FGFR1OP2Q9NVK5 253 aa10.92□□□□□ -0.66
LIG1-220ENST00000601091 NOP53Q9NZM5 478 aaKnown RBP10.92□□□□□ -0.66
LIG1-220ENST00000601091 HACD3Q9P035 362 aa10.92□□□□□ -0.66
LIG1-220ENST00000601091 SLC9A2Q9UBY0 812 aa10.92□□□□□ -0.66
LIG1-220ENST00000601091 PCDHA2Q9Y5H9 948 aa10.92□□□□□ -0.66
LIG1-220ENST00000601091 CIB2O75838 187 aa10.91□□□□□ -0.66
LIG1-220ENST00000601091 DCTN3O75935 186 aa10.91□□□□□ -0.66
LIG1-220ENST00000601091 ATP5HO75947 161 aa10.91□□□□□ -0.66
LIG1-220ENST00000601091 RPL21P46778 160 aaKnown RBP10.91□□□□□ -0.66
LIG1-220ENST00000601091 NPTX2P47972 431 aa10.91□□□□□ -0.66
LIG1-220ENST00000601091 DRG2P55039 364 aaKnown RBP10.91□□□□□ -0.66
LIG1-220ENST00000601091 ARL4CP56559 192 aa10.91□□□□□ -0.66
LIG1-220ENST00000601091 FKBP1AP62942 108 aaKnown RBP10.91□□□□□ -0.66
LIG1-220ENST00000601091 XKR3Q5GH77 459 aa10.91□□□□□ -0.66
LIG1-220ENST00000601091 CYB5D1Q6P9G0 228 aa10.91□□□□□ -0.66
LIG1-220ENST00000601091 SLC51AQ86UW1 340 aa10.91□□□□□ -0.66
LIG1-220ENST00000601091 C4orf19Q8IY42 314 aa10.91□□□□□ -0.66
LIG1-220ENST00000601091 RASGEF1CQ8N431 466 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 131.2 ms