RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.02■□□□□ 0.161e-11■□□□□ 8.5
TRIM28-207ENST00000597136 EPHB6O15197 1021 aa16.01■□□□□ 0.15
TRIM28-207ENST00000597136 CPB1P15086 417 aa16.01■□□□□ 0.15
TRIM28-207ENST00000597136 KCNQ1P51787 676 aa16.01■□□□□ 0.15
TRIM28-207ENST00000597136 TNNC1P63316 161 aa16.01■□□□□ 0.15
TRIM28-207ENST00000597136 TBX2Q13207 712 aaPredicted RBP16.01■□□□□ 0.15
TRIM28-207ENST00000597136 WDR44Q5JSH3 913 aa16.01■□□□□ 0.15
TRIM28-207ENST00000597136 PHLDB3Q6NSJ2 640 aa16.01■□□□□ 0.15
TRIM28-207ENST00000597136 THEM5Q8N1Q8 247 aa16.01■□□□□ 0.15
TRIM28-207ENST00000597136 TMEM86AQ8N2M4 240 aa16.01■□□□□ 0.15
TRIM28-207ENST00000597136 SPC24Q8NBT2 197 aa16.01■□□□□ 0.15
TRIM28-207ENST00000597136 NEK11Q8NG66 645 aa16.01■□□□□ 0.15
TRIM28-207ENST00000597136 PDLIM2Q96JY6 352 aa16.01■□□□□ 0.15
TRIM28-207ENST00000597136 GANQ9H2C0 597 aa16.01■□□□□ 0.15
TRIM28-207ENST00000597136 CRISPLD1Q9H336 500 aa16.01■□□□□ 0.15
TRIM28-207ENST00000597136 THEGQ9P2T0 379 aa16.01■□□□□ 0.15
TRIM28-207ENST00000597136 FBXW11Q9UKB1 542 aa16.01■□□□□ 0.15
TRIM28-207ENST00000597136 TTC28Q96AY4 2481 aa16.01■□□□□ 0.15
TRIM28-207ENST00000597136 ARHGEF37A1IGU5 675 aa16■□□□□ 0.15
TRIM28-207ENST00000597136 GRXCR2A6NFK2 248 aa16■□□□□ 0.15
TRIM28-207ENST00000597136 OR6C75A6NL08 312 aa16■□□□□ 0.15
TRIM28-207ENST00000597136 TRIM21P19474 475 aaKnown RBP16■□□□□ 0.15
TRIM28-207ENST00000597136 NOP14P78316 857 aaKnown RBP16■□□□□ 0.15
TRIM28-207ENST00000597136 ADCY1Q08828 1119 aa16■□□□□ 0.15
TRIM28-207ENST00000597136 LRMPQ12912 555 aa16■□□□□ 0.15
TRIM28-207ENST00000597136 FIGNQ5HY92 759 aa16■□□□□ 0.15
TRIM28-207ENST00000597136 RARS2Q5T160 578 aaKnown RBP16■□□□□ 0.15
TRIM28-207ENST00000597136 TMC5Q6UXY8 1006 aa16■□□□□ 0.15
TRIM28-207ENST00000597136 TTC9BQ8N6N2 239 aa16■□□□□ 0.15
TRIM28-207ENST00000597136 TAF4BQ92750 862 aa16■□□□□ 0.15
TRIM28-207ENST00000597136 NUP58Q9BVL2 599 aa16■□□□□ 0.15
TRIM28-207ENST00000597136 IMPG2Q9BZV3 1241 aa16■□□□□ 0.15
TRIM28-207ENST00000597136 TTYH3Q9C0H2 523 aa16■□□□□ 0.15
TRIM28-207ENST00000597136 ZCWPW1Q9H0M4 648 aa16■□□□□ 0.15
TRIM28-207ENST00000597136 APEX2Q9UBZ4 518 aa16■□□□□ 0.15
TRIM28-207ENST00000597136 CD207Q9UJ71 328 aa16■□□□□ 0.15
TRIM28-207ENST00000597136 TACC1O75410 805 aa16■□□□□ 0.15
TRIM28-207ENST00000597136 GYPCP04921 128 aa16■□□□□ 0.15
TRIM28-207ENST00000597136 ATF2P15336 505 aa16■□□□□ 0.15
TRIM28-207ENST00000597136 UCHL3P15374 230 aa16■□□□□ 0.15
TRIM28-207ENST00000597136 WARSP23381 471 aaKnown RBP16■□□□□ 0.15
TRIM28-207ENST00000597136 GNL1P36915 607 aaPredicted RBP16■□□□□ 0.15
TRIM28-207ENST00000597136 ASPAP45381 313 aa16■□□□□ 0.15
TRIM28-207ENST00000597136 GPR17Q13304 367 aa16■□□□□ 0.15
TRIM28-207ENST00000597136 LEXMQ3ZCV2 418 aa16■□□□□ 0.15
TRIM28-207ENST00000597136 SLC39A12Q504Y0 691 aa16■□□□□ 0.15
TRIM28-207ENST00000597136 GJB7Q6PEY0 223 aa16■□□□□ 0.15
TRIM28-207ENST00000597136 ARHGEF19Q8IW93 802 aa16■□□□□ 0.15
TRIM28-207ENST00000597136 ATAD1Q8NBU5 361 aa16■□□□□ 0.15
TRIM28-207ENST00000597136 CCDC150Q8NCX0 1101 aa16■□□□□ 0.15
TRIM28-207ENST00000597136 OR6B3Q8NGW1 331 aa16■□□□□ 0.15
TRIM28-207ENST00000597136 IQCDQ96DY2 449 aa16■□□□□ 0.15
TRIM28-207ENST00000597136 NT5C1BQ96P26 610 aa16■□□□□ 0.15
TRIM28-207ENST00000597136 ACBD6Q9BR61 282 aa16■□□□□ 0.15
TRIM28-207ENST00000597136 GTF3C4Q9UKN8 822 aa16■□□□□ 0.15
TRIM28-207ENST00000597136 SLC27A5Q9Y2P5 690 aa16■□□□□ 0.15
TRIM28-207ENST00000597136 CCDC195A0A1B0GUA6 201 aa15.99■□□□□ 0.15
TRIM28-207ENST00000597136 MYBPHLA2RUH7 354 aa15.99■□□□□ 0.15
TRIM28-207ENST00000597136 MBTPS2O43462 519 aa15.99■□□□□ 0.15
TRIM28-207ENST00000597136 C1RP00736 705 aa15.99■□□□□ 0.15
TRIM28-207ENST00000597136 LHX1P48742 406 aa15.99■□□□□ 0.15
TRIM28-207ENST00000597136 POLR2FP61218 127 aaKnown RBP15.99■□□□□ 0.15
TRIM28-207ENST00000597136 PSMC1P62191 440 aaKnown RBP15.99■□□□□ 0.15
TRIM28-207ENST00000597136 DUSP4Q13115 394 aa15.99■□□□□ 0.15
TRIM28-207ENST00000597136 TRIM14Q14142 442 aa15.99■□□□□ 0.15
TRIM28-207ENST00000597136 SMRP1Q8NCR6 262 aa15.99■□□□□ 0.15
TRIM28-207ENST00000597136 SLC7A14Q8TBB6 771 aa15.99■□□□□ 0.15
TRIM28-207ENST00000597136 CPLX3Q8WVH0 158 aa15.99■□□□□ 0.15
TRIM28-207ENST00000597136 PKMYT1Q99640 499 aa15.99■□□□□ 0.15
TRIM28-207ENST00000597136 ARID3AQ99856 593 aa15.99■□□□□ 0.15
TRIM28-207ENST00000597136 NAA15Q9BXJ9 866 aaKnown RBP15.99■□□□□ 0.15
TRIM28-207ENST00000597136 BCO2Q9BYV7 579 aa15.99■□□□□ 0.15
TRIM28-207ENST00000597136 SNX25Q9H3E2 840 aa15.99■□□□□ 0.15
TRIM28-207ENST00000597136 DPEP3Q9H4B8 488 aa15.99■□□□□ 0.15
TRIM28-207ENST00000597136 PLEKHA4Q9H4M7 779 aa15.99■□□□□ 0.15
TRIM28-207ENST00000597136 CYP4F11Q9HBI6 524 aa15.99■□□□□ 0.15
TRIM28-207ENST00000597136 UBE2TQ9NPD8 197 aaPredicted RBP15.99■□□□□ 0.15
TRIM28-207ENST00000597136 CRTAC1Q9NQ79 661 aa15.99■□□□□ 0.15
TRIM28-207ENST00000597136 CEP72Q9P209 647 aa15.99■□□□□ 0.15
TRIM28-207ENST00000597136 IMPACTQ9P2X3 320 aa15.99■□□□□ 0.15
TRIM28-207ENST00000597136 AFF4Q9UHB7 1163 aaKnown RBP15.99■□□□□ 0.15
TRIM28-207ENST00000597136 FHOD1Q9Y613 1164 aa15.99■□□□□ 0.15
TRIM28-207ENST00000597136 A0A1W2PQJ5 194 aa15.98■□□□□ 0.15
TRIM28-207ENST00000597136 MTMR11A4FU01 709 aa15.98■□□□□ 0.15
TRIM28-207ENST00000597136 SPDYE4A6NLX3 237 aa15.98■□□□□ 0.15
TRIM28-207ENST00000597136 RNF225M0QZC1 329 aaPredicted RBP15.98■□□□□ 0.15
TRIM28-207ENST00000597136 ZMYND10O75800 440 aa15.98■□□□□ 0.15
TRIM28-207ENST00000597136 SOAT2O75908 522 aa15.98■□□□□ 0.15
TRIM28-207ENST00000597136 C8AP07357 584 aa15.98■□□□□ 0.15
TRIM28-207ENST00000597136 SRGAP2BP0DMP2 458 aa15.98■□□□□ 0.15
TRIM28-207ENST00000597136 CASP14P31944 242 aa15.98■□□□□ 0.15
TRIM28-207ENST00000597136 ORC1Q13415 861 aa15.98■□□□□ 0.15
TRIM28-207ENST00000597136 TPGS2Q68CL5 300 aa15.98■□□□□ 0.15
TRIM28-207ENST00000597136 IQCEQ6IPM2 695 aa15.98■□□□□ 0.15
TRIM28-207ENST00000597136 PTCRAQ6ISU1 281 aaPredicted RBP15.98■□□□□ 0.15
TRIM28-207ENST00000597136 RRAGAQ7L523 313 aa15.98■□□□□ 0.15
TRIM28-207ENST00000597136 PPM1KQ8N3J5 372 aa15.98■□□□□ 0.15
TRIM28-207ENST00000597136 HDAC7Q8WUI4 952 aa15.98■□□□□ 0.15
TRIM28-207ENST00000597136 ZNF707Q96C28 371 aaPredicted RBP15.98■□□□□ 0.15
TRIM28-207ENST00000597136 OXCT2Q9BYC2 517 aaPredicted RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms