RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 SLCO1A2P46721 670 aa20.21■□□□□ 0.83
PRKCSH-209ENST00000589838 ACAP1Q15027 740 aa20.21■□□□□ 0.83
PRKCSH-209ENST00000589838 PTPN20Q4JDL3 420 aa20.21■□□□□ 0.83
PRKCSH-209ENST00000589838 ANKS1BQ7Z6G8 1248 aa20.21■□□□□ 0.83
PRKCSH-209ENST00000589838 TADA2BQ86TJ2 420 aa20.21■□□□□ 0.83
PRKCSH-209ENST00000589838 TMEM192Q8IY95 271 aa20.21■□□□□ 0.83
PRKCSH-209ENST00000589838 TMEM176AQ96HP8 235 aa20.21■□□□□ 0.83
PRKCSH-209ENST00000589838 KLHL11Q9NVR0 708 aa20.21■□□□□ 0.83
PRKCSH-209ENST00000589838 PLXNB2O15031 1838 aa20.21■□□□□ 0.83
PRKCSH-209ENST00000589838 GOLGA8SH3BPF8 625 aa20.2■□□□□ 0.82
PRKCSH-209ENST00000589838 GJA5P36382 358 aa20.2■□□□□ 0.82
PRKCSH-209ENST00000589838 CDKN2BP42772 138 aa20.2■□□□□ 0.82
PRKCSH-209ENST00000589838 RAP1GAPP47736 663 aa20.2■□□□□ 0.82
PRKCSH-209ENST00000589838 PTPN11Q06124 597 aaPredicted RBP20.2■□□□□ 0.82
PRKCSH-209ENST00000589838 KYNUQ16719 465 aa20.2■□□□□ 0.82
PRKCSH-209ENST00000589838 P3H1Q32P28 736 aa20.2■□□□□ 0.82
PRKCSH-209ENST00000589838 ZCCHC9Q8N567 271 aaKnown RBP20.2■□□□□ 0.82
PRKCSH-209ENST00000589838 ALLCQ8N6M5 410 aa20.2■□□□□ 0.82
PRKCSH-209ENST00000589838 TTC13Q8NBP0 860 aa20.2■□□□□ 0.82
PRKCSH-209ENST00000589838 NINJ2Q9NZG7 142 aa20.2■□□□□ 0.82
PRKCSH-209ENST00000589838 DNPEPQ9ULA0 475 aa20.2■□□□□ 0.82
PRKCSH-209ENST00000589838 ANKRD65E5RJM6 399 aa20.2■□□□□ 0.82
PRKCSH-209ENST00000589838 DNALI1O14645 258 aaPredicted RBP20.2■□□□□ 0.82
PRKCSH-209ENST00000589838 CILPO75339 1184 aa20.2■□□□□ 0.82
PRKCSH-209ENST00000589838 ITGAVP06756 1048 aa20.2■□□□□ 0.82
PRKCSH-209ENST00000589838 CYP2C8P10632 490 aa20.2■□□□□ 0.82
PRKCSH-209ENST00000589838 VDRP11473 427 aa20.2■□□□□ 0.82
PRKCSH-209ENST00000589838 TCF4P15884 667 aa20.2■□□□□ 0.82
PRKCSH-209ENST00000589838 ADORA2AP29274 412 aa20.2■□□□□ 0.82
PRKCSH-209ENST00000589838 RFC1P35251 1148 aaPredicted RBP20.2■□□□□ 0.82
PRKCSH-209ENST00000589838 VCPP55072 806 aaKnown RBP20.2■□□□□ 0.82
PRKCSH-209ENST00000589838 STAT4Q14765 748 aa20.2■□□□□ 0.82
PRKCSH-209ENST00000589838 TMEM132DQ14C87 1099 aa20.2■□□□□ 0.82
PRKCSH-209ENST00000589838 UBAP2Q5T6F2 1119 aaKnown RBP20.2■□□□□ 0.82
PRKCSH-209ENST00000589838 GKAP1Q5VSY0 366 aaPredicted RBP20.2■□□□□ 0.82
PRKCSH-209ENST00000589838 MTHFD1LQ6UB35 978 aa20.2■□□□□ 0.82
PRKCSH-209ENST00000589838 CACNA2D3Q8IZS8 1091 aa20.2■□□□□ 0.82
PRKCSH-209ENST00000589838 SLC4A11Q8NBS3 891 aa20.2■□□□□ 0.82
PRKCSH-209ENST00000589838 AFG1LQ8WV93 481 aa20.2■□□□□ 0.82
PRKCSH-209ENST00000589838 NKD2Q969F2 451 aaPredicted RBP20.2■□□□□ 0.82
PRKCSH-209ENST00000589838 ZBTB10Q96DT7 871 aa20.2■□□□□ 0.82
PRKCSH-209ENST00000589838 FAM118BQ9BPY3 351 aa20.2■□□□□ 0.82
PRKCSH-209ENST00000589838 ADPGKQ9BRR6 497 aa20.2■□□□□ 0.82
PRKCSH-209ENST00000589838 MIS12Q9H081 205 aa20.2■□□□□ 0.82
PRKCSH-209ENST00000589838 ADAM7Q9H2U9 754 aa20.2■□□□□ 0.82
PRKCSH-209ENST00000589838 CCDC134Q9H6E4 229 aa20.2■□□□□ 0.82
PRKCSH-209ENST00000589838 ITGA11Q9UKX5 1188 aa20.2■□□□□ 0.82
PRKCSH-209ENST00000589838 KIAA1257Q9ULG3 409 aa20.2■□□□□ 0.82
PRKCSH-209ENST00000589838 STAU1O95793 577 aaKnown RBP20.19■□□□□ 0.82
PRKCSH-209ENST00000589838 HMGCRP04035 888 aa20.19■□□□□ 0.82
PRKCSH-209ENST00000589838 CETPP11597 493 aa20.19■□□□□ 0.82
PRKCSH-209ENST00000589838 RDXP35241 583 aaKnown RBP20.19■□□□□ 0.82
PRKCSH-209ENST00000589838 CDH8P55286 799 aa20.19■□□□□ 0.82
PRKCSH-209ENST00000589838 RBP5P82980 135 aa20.19■□□□□ 0.82
PRKCSH-209ENST00000589838 CNGA2Q16280 664 aa20.19■□□□□ 0.82
PRKCSH-209ENST00000589838 LONRF1Q17RB8 773 aa20.19■□□□□ 0.82
PRKCSH-209ENST00000589838 APBB1IPQ7Z5R6 666 aaPredicted RBP20.19■□□□□ 0.82
PRKCSH-209ENST00000589838 HPDLQ96IR7 371 aa20.19■□□□□ 0.82
PRKCSH-209ENST00000589838 TTC25Q96NG3 672 aa20.19■□□□□ 0.82
PRKCSH-209ENST00000589838 DDX20Q9UHI6 824 aaKnown RBP20.19■□□□□ 0.82
PRKCSH-209ENST00000589838 C2CD2Q9Y426 696 aa20.19■□□□□ 0.82
PRKCSH-209ENST00000589838 ABHD2P08910 425 aa20.18■□□□□ 0.82
PRKCSH-209ENST00000589838 ARF4P18085 180 aaPredicted RBP20.18■□□□□ 0.82
PRKCSH-209ENST00000589838 GABRB2P47870 512 aa20.18■□□□□ 0.82
PRKCSH-209ENST00000589838 GCLCP48506 637 aaPredicted RBP20.18■□□□□ 0.82
PRKCSH-209ENST00000589838 SLC10A6Q3KNW5 377 aa20.18■□□□□ 0.82
PRKCSH-209ENST00000589838 MAMDC4Q6UXC1 1216 aa20.18■□□□□ 0.82
PRKCSH-209ENST00000589838 ATXN2LQ8WWM7 1075 aaKnown RBP20.18■□□□□ 0.82
PRKCSH-209ENST00000589838 NLRP7Q8WX94 980 aa20.18■□□□□ 0.82
PRKCSH-209ENST00000589838 ARHGEF2Q92974 986 aaKnown RBP20.18■□□□□ 0.82
PRKCSH-209ENST00000589838 ACAP3Q96P50 834 aa20.18■□□□□ 0.82
PRKCSH-209ENST00000589838 SDCBP2Q9H190 292 aa20.18■□□□□ 0.82
PRKCSH-209ENST00000589838 SMYD3Q9H7B4 428 aa20.18■□□□□ 0.82
PRKCSH-209ENST00000589838 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.18■□□□□ 0.82
PRKCSH-209ENST00000589838 TPX2Q9ULW0 747 aaKnown RBP20.18■□□□□ 0.82
PRKCSH-209ENST00000589838 DRD4P21917 467 aa20.18■□□□□ 0.82
PRKCSH-209ENST00000589838 ARSEP51690 589 aa20.18■□□□□ 0.82
PRKCSH-209ENST00000589838 C6orf89Q6UWU4 347 aa20.18■□□□□ 0.82
PRKCSH-209ENST00000589838 EXOC3L1Q86VI1 746 aa20.18■□□□□ 0.82
PRKCSH-209ENST00000589838 ZNF410Q86VK4 478 aa20.18■□□□□ 0.82
PRKCSH-209ENST00000589838 XYLT1Q86Y38 959 aa20.18■□□□□ 0.82
PRKCSH-209ENST00000589838 CXorf38Q8TB03 319 aa20.18■□□□□ 0.82
PRKCSH-209ENST00000589838 CPB2Q96IY4 423 aa20.18■□□□□ 0.82
PRKCSH-209ENST00000589838 SEC16BQ96JE7 1060 aa20.18■□□□□ 0.82
PRKCSH-209ENST00000589838 CABS1Q96KC9 395 aa20.18■□□□□ 0.82
PRKCSH-209ENST00000589838 CFAP57Q96MR6 1250 aa20.18■□□□□ 0.82
PRKCSH-209ENST00000589838 ELOVL4Q9GZR5 314 aa20.18■□□□□ 0.82
PRKCSH-209ENST00000589838 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.18■□□□□ 0.82
PRKCSH-209ENST00000589838 AGAP1Q9UPQ3 857 aa20.18■□□□□ 0.82
PRKCSH-209ENST00000589838 H3BRB1 525 aa20.17■□□□□ 0.82
PRKCSH-209ENST00000589838 PDHXO00330 501 aa20.17■□□□□ 0.82
PRKCSH-209ENST00000589838 RNF8O76064 485 aa20.17■□□□□ 0.82
PRKCSH-209ENST00000589838 MICAL2O94851 1124 aa20.17■□□□□ 0.82
PRKCSH-209ENST00000589838 CPP00450 1065 aa20.17■□□□□ 0.82
PRKCSH-209ENST00000589838 VTNP04004 478 aa20.17■□□□□ 0.82
PRKCSH-209ENST00000589838 MAGEA4P43358 317 aa20.17■□□□□ 0.82
PRKCSH-209ENST00000589838 PLCB3Q01970 1234 aa20.17■□□□□ 0.82
PRKCSH-209ENST00000589838 MORF4L2Q15014 288 aa20.17■□□□□ 0.82
PRKCSH-209ENST00000589838 OASLQ15646 514 aaKnown RBP20.17■□□□□ 0.82
PRKCSH-209ENST00000589838 PCGF5Q86SE9 256 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms