RNA–Protein interactions for RNA: ENST00000585894.5

RETREG3-203, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 1 (best) BASIC

Gene RETREG3, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-203ENST00000585894 POMKQ9H5K3 350 aa13.48□□□□□ -0.25
RETREG3-203ENST00000585894 YIPF1Q9Y548 306 aa13.48□□□□□ -0.25
RETREG3-203ENST00000585894 N4BP1O75113 896 aaKnown RBP13.47□□□□□ -0.25
RETREG3-203ENST00000585894 C1RP00736 705 aa13.47□□□□□ -0.25
RETREG3-203ENST00000585894 P4HA1P13674 534 aa13.47□□□□□ -0.25
RETREG3-203ENST00000585894 ITIH3Q06033 890 aa13.47□□□□□ -0.25
RETREG3-203ENST00000585894 CBX2Q14781 532 aaPredicted RBP13.47□□□□□ -0.25
RETREG3-203ENST00000585894 MAN2A1Q16706 1144 aa13.47□□□□□ -0.25
RETREG3-203ENST00000585894 ZNF394Q53GI3 561 aa13.47□□□□□ -0.25
RETREG3-203ENST00000585894 TCP11X2Q5H9J9 407 aa13.47□□□□□ -0.25
RETREG3-203ENST00000585894 MIIPQ5JXC2 388 aa13.47□□□□□ -0.25
RETREG3-203ENST00000585894 SDHAF4Q5VUM1 108 aa13.47□□□□□ -0.25
RETREG3-203ENST00000585894 ELMSAN1Q6PJG2 1045 aa13.47□□□□□ -0.25
RETREG3-203ENST00000585894 CCDC149Q6ZUS6 474 aa13.47□□□□□ -0.25
RETREG3-203ENST00000585894 ACOT1Q86TX2 421 aa13.47□□□□□ -0.25
RETREG3-203ENST00000585894 ARHGEF19Q8IW93 802 aa13.47□□□□□ -0.25
RETREG3-203ENST00000585894 DHX40Q8IX18 779 aaKnown RBP13.47□□□□□ -0.25
RETREG3-203ENST00000585894 DCP1BQ8IZD4 617 aaKnown RBP13.47□□□□□ -0.25
RETREG3-203ENST00000585894 SPATA18Q8TC71 538 aa13.47□□□□□ -0.25
RETREG3-203ENST00000585894 GPR152Q8TDT2 470 aa13.47□□□□□ -0.25
RETREG3-203ENST00000585894 MYLPFQ96A32 169 aa13.47□□□□□ -0.25
RETREG3-203ENST00000585894 TUBGCP2Q9BSJ2 902 aa13.47□□□□□ -0.25
RETREG3-203ENST00000585894 INTS2Q9H0H0 1204 aaKnown RBP13.47□□□□□ -0.25
RETREG3-203ENST00000585894 PIDD1Q9HB75 910 aa13.47□□□□□ -0.25
RETREG3-203ENST00000585894 ZDHHC7Q9NXF8 308 aa13.47□□□□□ -0.25
RETREG3-203ENST00000585894 GCNT4Q9P109 453 aa13.47□□□□□ -0.25
RETREG3-203ENST00000585894 DPP7Q9UHL4 492 aa13.47□□□□□ -0.25
RETREG3-203ENST00000585894 CDH9Q9ULB4 789 aa13.47□□□□□ -0.25
RETREG3-203ENST00000585894 TTC28Q96AY4 2481 aa13.47□□□□□ -0.25
RETREG3-203ENST00000585894 CLDN5O00501 218 aa13.47□□□□□ -0.25
RETREG3-203ENST00000585894 PES1O00541 588 aaKnown RBP13.47□□□□□ -0.25
RETREG3-203ENST00000585894 LETM1O95202 739 aaPredicted RBP13.47□□□□□ -0.25
RETREG3-203ENST00000585894 LRG1P02750 347 aa13.47□□□□□ -0.25
RETREG3-203ENST00000585894 CYP2F1P24903 491 aa13.47□□□□□ -0.25
RETREG3-203ENST00000585894 CYP27A1Q02318 531 aa13.47□□□□□ -0.25
RETREG3-203ENST00000585894 SMAD2Q15796 467 aaKnown RBP13.47□□□□□ -0.25
RETREG3-203ENST00000585894 MGAT5BQ3V5L5 792 aa13.47□□□□□ -0.25
RETREG3-203ENST00000585894 FAM171BQ6P995 826 aa13.47□□□□□ -0.25
RETREG3-203ENST00000585894 GJB7Q6PEY0 223 aa13.47□□□□□ -0.25
RETREG3-203ENST00000585894 RRAGAQ7L523 313 aa13.47□□□□□ -0.25
RETREG3-203ENST00000585894 GRASPQ7Z6J2 395 aaPredicted RBP13.47□□□□□ -0.25
RETREG3-203ENST00000585894 CMASQ8NFW8 434 aaPredicted RBP13.47□□□□□ -0.25
RETREG3-203ENST00000585894 PCED1BQ96HM7 432 aa13.47□□□□□ -0.25
RETREG3-203ENST00000585894 CEP72Q9P209 647 aa13.47□□□□□ -0.25
RETREG3-203ENST00000585894 PCDHB5Q9Y5E4 795 aa13.47□□□□□ -0.25
RETREG3-203ENST00000585894 DOCK8Q8NF50 2099 aa13.47□□□□□ -0.25
RETREG3-203ENST00000585894 NRG2O14511 850 aaPredicted RBP13.46□□□□□ -0.25
RETREG3-203ENST00000585894 HAPLN1P10915 354 aaPredicted RBP13.46□□□□□ -0.25
RETREG3-203ENST00000585894 ATP1A3P13637 1013 aa13.46□□□□□ -0.25
RETREG3-203ENST00000585894 PTPN1P18031 435 aaKnown RBP13.46□□□□□ -0.25
RETREG3-203ENST00000585894 ATF6P18850 670 aa13.46□□□□□ -0.25
RETREG3-203ENST00000585894 SLC9A1P19634 815 aa13.46□□□□□ -0.25
RETREG3-203ENST00000585894 ZNF165P49910 485 aa13.46□□□□□ -0.25
RETREG3-203ENST00000585894 KRT31Q15323 416 aa13.46□□□□□ -0.25
RETREG3-203ENST00000585894 VWA3BQ502W6 1294 aa13.46□□□□□ -0.25
RETREG3-203ENST00000585894 TJAP1Q5JTD0 557 aa13.46□□□□□ -0.25
RETREG3-203ENST00000585894 ATAT1Q5SQI0 421 aa13.46□□□□□ -0.25
RETREG3-203ENST00000585894 C12orf29Q8N999 325 aa13.46□□□□□ -0.25
RETREG3-203ENST00000585894 B3GALNT2Q8NCR0 500 aa13.46□□□□□ -0.25
RETREG3-203ENST00000585894 EHBP1Q8NDI1 1231 aa13.46□□□□□ -0.25
RETREG3-203ENST00000585894 WHAMMQ8TF30 809 aa13.46□□□□□ -0.25
RETREG3-203ENST00000585894 GIPC2Q8TF65 315 aa13.46□□□□□ -0.25
RETREG3-203ENST00000585894 ELOVL4Q9GZR5 314 aa13.46□□□□□ -0.25
RETREG3-203ENST00000585894 VPS16Q9H269 839 aa13.46□□□□□ -0.25
RETREG3-203ENST00000585894 NDST4Q9H3R1 872 aa13.46□□□□□ -0.25
RETREG3-203ENST00000585894 CISHQ9NSE2 258 aa13.46□□□□□ -0.25
RETREG3-203ENST00000585894 FAM49BQ9NUQ9 324 aa13.46□□□□□ -0.25
RETREG3-203ENST00000585894 DNMT3BQ9UBC3 853 aaKnown RBP13.46□□□□□ -0.25
RETREG3-203ENST00000585894 BDP1A6H8Y1 2624 aa13.46□□□□□ -0.25
RETREG3-203ENST00000585894 GREB1Q4ZG55 1949 aa13.46□□□□□ -0.26
RETREG3-203ENST00000585894 NCOR1O75376 2440 aa13.45□□□□□ -0.26
RETREG3-203ENST00000585894 PMM2O15305 246 aa13.45□□□□□ -0.26
RETREG3-203ENST00000585894 P4HA2O15460 535 aa13.45□□□□□ -0.26
RETREG3-203ENST00000585894 CILPO75339 1184 aa13.45□□□□□ -0.26
RETREG3-203ENST00000585894 HNRNPA1P09651 372 aaKnown RBP eCLIP13.45□□□□□ -0.26
RETREG3-203ENST00000585894 CCDC130P13994 396 aa13.45□□□□□ -0.26
RETREG3-203ENST00000585894 BDNFP23560 247 aa13.45□□□□□ -0.26
RETREG3-203ENST00000585894 EEF1GP26641 437 aaKnown RBP13.45□□□□□ -0.26
RETREG3-203ENST00000585894 CACNA2D1P54289 1103 aa13.45□□□□□ -0.26
RETREG3-203ENST00000585894 INCA1Q0VD86 236 aa13.45□□□□□ -0.26
RETREG3-203ENST00000585894 CETN1Q12798 172 aa13.45□□□□□ -0.26
RETREG3-203ENST00000585894 CUL2Q13617 745 aa13.45□□□□□ -0.26
RETREG3-203ENST00000585894 DDR2Q16832 855 aa13.45□□□□□ -0.26
RETREG3-203ENST00000585894 UVSSAQ2YD98 709 aa13.45□□□□□ -0.26
RETREG3-203ENST00000585894 SPATA2LQ8IUW3 424 aaPredicted RBP13.45□□□□□ -0.26
RETREG3-203ENST00000585894 HS6ST3Q8IZP7 471 aa13.45□□□□□ -0.26
RETREG3-203ENST00000585894 PPM1KQ8N3J5 372 aa13.45□□□□□ -0.26
RETREG3-203ENST00000585894 MYCBPAPQ8TBZ2 947 aa13.45□□□□□ -0.26
RETREG3-203ENST00000585894 RIPOR3Q96MK2 946 aa13.45□□□□□ -0.26
RETREG3-203ENST00000585894 NT5C1BQ96P26 610 aa13.45□□□□□ -0.26
RETREG3-203ENST00000585894 B3GNT5Q9BYG0 378 aa13.45□□□□□ -0.26
RETREG3-203ENST00000585894 ZNF518BQ9C0D4 1074 aa13.45□□□□□ -0.26
RETREG3-203ENST00000585894 NAT10Q9H0A0 1025 aaKnown RBP13.45□□□□□ -0.26
RETREG3-203ENST00000585894 CYP3A43Q9HB55 503 aa13.45□□□□□ -0.26
RETREG3-203ENST00000585894 TMEM30AQ9NV96 361 aa13.45□□□□□ -0.26
RETREG3-203ENST00000585894 CALCAP01258 141 aa13.44□□□□□ -0.26
RETREG3-203ENST00000585894 FAM163BP0C2L3 166 aa13.44□□□□□ -0.26
RETREG3-203ENST00000585894 ZNF18P17022 549 aa13.44□□□□□ -0.26
RETREG3-203ENST00000585894 HOXA9P31269 272 aa13.44□□□□□ -0.26
RETREG3-203ENST00000585894 MTHFRP42898 656 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms