RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 ATAD3AQ9NVI7 634 aa6.51□□□□□ -1.37
SMAD4-203ENST00000585448 STK39Q9UEW8 545 aa6.51□□□□□ -1.37
SMAD4-203ENST00000585448 HERC5Q9UII4 1024 aaKnown RBP6.51□□□□□ -1.37
SMAD4-203ENST00000585448 CCPG1Q9ULG6 757 aa6.51□□□□□ -1.37
SMAD4-203ENST00000585448 CNOT6Q9ULM6 557 aaKnown RBP6.51□□□□□ -1.37
SMAD4-203ENST00000585448 TMCC3Q9ULS5 477 aa6.51□□□□□ -1.37
SMAD4-203ENST00000585448 MRPL42Q9Y6G3 142 aaKnown RBP6.51□□□□□ -1.37
SMAD4-203ENST00000585448 CARMIL1Q5VZK9 1371 aa6.51□□□□□ -1.37
SMAD4-203ENST00000585448 ADGBQ8N7X0 1667 aa6.51□□□□□ -1.37
SMAD4-203ENST00000585448 PPRC1Q5VV67 1664 aaKnown RBP6.5□□□□□ -1.37
SMAD4-203ENST00000585448 ABCC10Q5T3U5 1492 aa6.5□□□□□ -1.37
SMAD4-203ENST00000585448 WDR7Q9Y4E6 1490 aa6.5□□□□□ -1.37
SMAD4-203ENST00000585448 ABCC12Q96J65 1359 aa6.5□□□□□ -1.37
SMAD4-203ENST00000585448 KRTAP9-6A0A140TA67 174 aa6.5□□□□□ -1.37
SMAD4-203ENST00000585448 SMIM31A0A1B0GVY4 71 aa6.5□□□□□ -1.37
SMAD4-203ENST00000585448 TCRBV16S1A1N1A0A5B0 115 aa6.5□□□□□ -1.37
SMAD4-203ENST00000585448 TLDC2A0PJX2 215 aa6.5□□□□□ -1.37
SMAD4-203ENST00000585448 B4E1Z4 1266 aa6.5□□□□□ -1.37
SMAD4-203ENST00000585448 TEX28O15482 410 aa6.5□□□□□ -1.37
SMAD4-203ENST00000585448 ASAP2O43150 1006 aa6.5□□□□□ -1.37
SMAD4-203ENST00000585448 SGTAO43765 313 aa6.5□□□□□ -1.37
SMAD4-203ENST00000585448 ASMTLO95671 621 aa6.5□□□□□ -1.37
SMAD4-203ENST00000585448 APOEP02649 317 aa6.5□□□□□ -1.37
SMAD4-203ENST00000585448 CKMP06732 381 aa6.5□□□□□ -1.37
SMAD4-203ENST00000585448 GNAZP19086 355 aa6.5□□□□□ -1.37
SMAD4-203ENST00000585448 LIFRP42702 1097 aa6.5□□□□□ -1.37
SMAD4-203ENST00000585448 KIF11P52732 1056 aa6.5□□□□□ -1.37
SMAD4-203ENST00000585448 UBASH3AP57075 661 aa6.5□□□□□ -1.37
SMAD4-203ENST00000585448 DR1Q01658 176 aa6.5□□□□□ -1.37
SMAD4-203ENST00000585448 WASHC5Q12768 1159 aa6.5□□□□□ -1.37
SMAD4-203ENST00000585448 IKQ13123 557 aaPredicted RBP6.5□□□□□ -1.37
SMAD4-203ENST00000585448 BIRC3Q13489 604 aa6.5□□□□□ -1.37
SMAD4-203ENST00000585448 KIF22Q14807 665 aa6.5□□□□□ -1.37
SMAD4-203ENST00000585448 GPR19Q15760 415 aa6.5□□□□□ -1.37
SMAD4-203ENST00000585448 IMMTQ16891 758 aaKnown RBP6.5□□□□□ -1.37
SMAD4-203ENST00000585448 TTMPQ5BVD1 217 aa6.5□□□□□ -1.37
SMAD4-203ENST00000585448 ZNF569Q5MCW4 686 aa6.5□□□□□ -1.37
SMAD4-203ENST00000585448 RNF220Q5VTB9 566 aa6.5□□□□□ -1.37
SMAD4-203ENST00000585448 TCERG1LQ5VWI1 586 aa6.5□□□□□ -1.37
SMAD4-203ENST00000585448 TRIM68Q6AZZ1 485 aa6.5□□□□□ -1.37
SMAD4-203ENST00000585448 CCDC174Q6PII3 467 aa6.5□□□□□ -1.37
SMAD4-203ENST00000585448 LRIG3Q6UXM1 1119 aa6.5□□□□□ -1.37
SMAD4-203ENST00000585448 KIAA0907Q7Z7F0 614 aaPredicted RBP6.5□□□□□ -1.37
SMAD4-203ENST00000585448 ZC3H18Q86VM9 953 aaKnown RBP6.5□□□□□ -1.37
SMAD4-203ENST00000585448 LURAP1LQ8IV03 231 aa6.5□□□□□ -1.37
SMAD4-203ENST00000585448 NLGN4XQ8N0W4 816 aa6.5□□□□□ -1.37
SMAD4-203ENST00000585448 THEMISQ8N1K5 641 aaPredicted RBP6.5□□□□□ -1.37
SMAD4-203ENST00000585448 MREGQ8N565 214 aa6.5□□□□□ -1.37
SMAD4-203ENST00000585448 TMCO5AQ8N6Q1 288 aa6.5□□□□□ -1.37
SMAD4-203ENST00000585448 LINC00482Q8N8I6 264 aa6.5□□□□□ -1.37
SMAD4-203ENST00000585448 NOA1Q8NC60 698 aaKnown RBP6.5□□□□□ -1.37
SMAD4-203ENST00000585448 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.5□□□□□ -1.37
SMAD4-203ENST00000585448 NOC3LQ8WTT2 800 aaKnown RBP6.5□□□□□ -1.37
SMAD4-203ENST00000585448 DNAJC9Q8WXX5 260 aa6.5□□□□□ -1.37
SMAD4-203ENST00000585448 HPS3Q969F9 1004 aa6.5□□□□□ -1.37
SMAD4-203ENST00000585448 DACT3Q96B18 629 aaPredicted RBP6.5□□□□□ -1.37
SMAD4-203ENST00000585448 CENPTQ96BT3 561 aa6.5□□□□□ -1.37
SMAD4-203ENST00000585448 EFHD2Q96C19 240 aaPredicted RBP6.5□□□□□ -1.37
SMAD4-203ENST00000585448 CCDC51Q96ER9 411 aa6.5□□□□□ -1.37
SMAD4-203ENST00000585448 ANKRD36BP1Q96IX9 119 aa6.5□□□□□ -1.37
SMAD4-203ENST00000585448 VPS50Q96JG6 964 aa6.5□□□□□ -1.37
SMAD4-203ENST00000585448 C8orf76Q96K31 380 aa6.5□□□□□ -1.37
SMAD4-203ENST00000585448 ATP6V1G3Q96LB4 118 aa6.5□□□□□ -1.37
SMAD4-203ENST00000585448 TESK2Q96S53 571 aa6.5□□□□□ -1.37
SMAD4-203ENST00000585448 RAB17Q9H0T7 212 aa6.5□□□□□ -1.37
SMAD4-203ENST00000585448 TAF1DQ9H5J8 278 aaPredicted RBP6.5□□□□□ -1.37
SMAD4-203ENST00000585448 BTBD7Q9P203 1132 aa6.5□□□□□ -1.37
SMAD4-203ENST00000585448 MAFFQ9ULX9 164 aa6.5□□□□□ -1.37
SMAD4-203ENST00000585448 TSC22D4Q9Y3Q8 395 aa6.5□□□□□ -1.37
SMAD4-203ENST00000585448 KCTD3Q9Y597 815 aa6.5□□□□□ -1.37
SMAD4-203ENST00000585448 PCDHA9Q9Y5H5 950 aa6.5□□□□□ -1.37
SMAD4-203ENST00000585448 SQORQ9Y6N5 450 aa6.5□□□□□ -1.37
SMAD4-203ENST00000585448 TRPM1Q7Z4N2 1603 aa6.5□□□□□ -1.37
SMAD4-203ENST00000585448 EIF2AK4Q9P2K8 1649 aaKnown RBP6.5□□□□□ -1.37
SMAD4-203ENST00000585448 EIF4G3O43432 1585 aaKnown RBP6.49□□□□□ -1.37
SMAD4-203ENST00000585448 GRIN2BQ13224 1484 aa6.49□□□□□ -1.37
SMAD4-203ENST00000585448 TCHHQ07283 1943 aa6.49□□□□□ -1.37
SMAD4-203ENST00000585448 CEMIPQ8WUJ3 1361 aa6.49□□□□□ -1.37
SMAD4-203ENST00000585448 DISP3Q9P2K9 1392 aa6.49□□□□□ -1.37
SMAD4-203ENST00000585448 PLEKHG1Q9ULL1 1385 aa6.49□□□□□ -1.37
SMAD4-203ENST00000585448 NPIPB6E9PJ23 425 aa6.49□□□□□ -1.37
SMAD4-203ENST00000585448 E9PMD0 336 aa6.49□□□□□ -1.37
SMAD4-203ENST00000585448 H0YC42 278 aa6.49□□□□□ -1.37
SMAD4-203ENST00000585448 ZNF561-AS1K7EIQ3 104 aa6.49□□□□□ -1.37
SMAD4-203ENST00000585448 KMOO15229 486 aa6.49□□□□□ -1.37
SMAD4-203ENST00000585448 ORC4O43929 436 aa6.49□□□□□ -1.37
SMAD4-203ENST00000585448 ALDH1L1O75891 902 aa6.49□□□□□ -1.37
SMAD4-203ENST00000585448 MTA2O94776 668 aa6.49□□□□□ -1.37
SMAD4-203ENST00000585448 GSTT2P0CG29 244 aa6.49□□□□□ -1.37
SMAD4-203ENST00000585448 GSTT2BP0CG30 244 aa6.49□□□□□ -1.37
SMAD4-203ENST00000585448 TGFB3P10600 412 aa6.49□□□□□ -1.37
SMAD4-203ENST00000585448 CYP2C9P11712 490 aa6.49□□□□□ -1.37
SMAD4-203ENST00000585448 KCNA6P17658 529 aa6.49□□□□□ -1.37
SMAD4-203ENST00000585448 CDC25CP30307 473 aa6.49□□□□□ -1.37
SMAD4-203ENST00000585448 SKIV2L2P42285 1042 aaKnown RBP6.49□□□□□ -1.37
SMAD4-203ENST00000585448 ACADSBP45954 432 aa6.49□□□□□ -1.37
SMAD4-203ENST00000585448 TMED10P49755 219 aaKnown RBP6.49□□□□□ -1.37
SMAD4-203ENST00000585448 MXI1P50539 228 aa6.49□□□□□ -1.37
SMAD4-203ENST00000585448 TUBP50607 506 aa6.49□□□□□ -1.37
SMAD4-203ENST00000585448 CACNA2D1P54289 1103 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms