RNA–Protein interactions for RNA: ENST00000581250.5

PPP4R1-219, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-219ENST00000581250 VAMP7P51809 220 aa12.73□□□□□ -0.37
PPP4R1-219ENST00000581250 EPHA5P54756 1037 aa12.73□□□□□ -0.37
PPP4R1-219ENST00000581250 CYP4F8P98187 520 aa12.73□□□□□ -0.37
PPP4R1-219ENST00000581250 SMARCB1Q12824 385 aa12.73□□□□□ -0.37
PPP4R1-219ENST00000581250 ADAM9Q13443 819 aa12.73□□□□□ -0.37
PPP4R1-219ENST00000581250 TAF12Q16514 161 aa12.73□□□□□ -0.37
PPP4R1-219ENST00000581250 NFE2Q16621 373 aaPredicted RBP12.73□□□□□ -0.37
PPP4R1-219ENST00000581250 FAM78AQ5JUQ0 283 aa12.73□□□□□ -0.37
PPP4R1-219ENST00000581250 C1orf220Q5T0J3 134 aa12.73□□□□□ -0.37
PPP4R1-219ENST00000581250 ZNF658Q5TYW1 1059 aaPredicted RBP12.73□□□□□ -0.37
PPP4R1-219ENST00000581250 GAREM2Q75VX8 874 aa12.73□□□□□ -0.37
PPP4R1-219ENST00000581250 LIMS2Q7Z4I7 341 aa12.73□□□□□ -0.37
PPP4R1-219ENST00000581250 BMP8AQ7Z5Y6 402 aa12.73□□□□□ -0.37
PPP4R1-219ENST00000581250 DNAJB7Q7Z6W7 309 aaPredicted RBP12.73□□□□□ -0.37
PPP4R1-219ENST00000581250 ITIH5Q86UX2 942 aa12.73□□□□□ -0.37
PPP4R1-219ENST00000581250 SPATA2LQ8IUW3 424 aaPredicted RBP12.73□□□□□ -0.37
PPP4R1-219ENST00000581250 GPIHBP1Q8IV16 184 aa12.73□□□□□ -0.37
PPP4R1-219ENST00000581250 FLCNQ8NFG4 579 aa12.73□□□□□ -0.37
PPP4R1-219ENST00000581250 OR6B3Q8NGW1 331 aa12.73□□□□□ -0.37
PPP4R1-219ENST00000581250 SPATA18Q8TC71 538 aa12.73□□□□□ -0.37
PPP4R1-219ENST00000581250 TMC2Q8TDI7 906 aa12.73□□□□□ -0.37
PPP4R1-219ENST00000581250 C2orf15Q8WU43 125 aaKnown RBP12.73□□□□□ -0.37
PPP4R1-219ENST00000581250 PSMG2Q969U7 264 aa12.73□□□□□ -0.37
PPP4R1-219ENST00000581250 NXPE3Q969Y0 559 aa12.73□□□□□ -0.37
PPP4R1-219ENST00000581250 MYLPFQ96A32 169 aa12.73□□□□□ -0.37
PPP4R1-219ENST00000581250 SYAP1Q96A49 352 aaPredicted RBP12.73□□□□□ -0.37
PPP4R1-219ENST00000581250 GSDMAQ96QA5 445 aa12.73□□□□□ -0.37
PPP4R1-219ENST00000581250 LRRC3Q9BY71 257 aa12.73□□□□□ -0.37
PPP4R1-219ENST00000581250 CRTAC1Q9NQ79 661 aa12.73□□□□□ -0.37
PPP4R1-219ENST00000581250 MAN1B1Q9UKM7 699 aa12.73□□□□□ -0.37
PPP4R1-219ENST00000581250 NME7Q9Y5B8 376 aa12.73□□□□□ -0.37
PPP4R1-219ENST00000581250 DENND4CQ5VZ89 1909 aa12.72□□□□□ -0.37
PPP4R1-219ENST00000581250 NUP210Q8TEM1 1887 aaPredicted RBP12.72□□□□□ -0.37
PPP4R1-219ENST00000581250 BIN1O00499 593 aa12.72□□□□□ -0.37
PPP4R1-219ENST00000581250 HLA-DRAP01903 254 aa12.72□□□□□ -0.37
PPP4R1-219ENST00000581250 C4BPAP04003 597 aaKnown RBP12.72□□□□□ -0.37
PPP4R1-219ENST00000581250 RFX1P22670 979 aa12.72□□□□□ -0.37
PPP4R1-219ENST00000581250 FCARP24071 287 aa12.72□□□□□ -0.37
PPP4R1-219ENST00000581250 RPL13P26373 211 aaKnown RBP12.72□□□□□ -0.37
PPP4R1-219ENST00000581250 ATICP31939 592 aa12.72□□□□□ -0.37
PPP4R1-219ENST00000581250 GCLMP48507 274 aa12.72□□□□□ -0.37
PPP4R1-219ENST00000581250 AP3M2P53677 418 aa12.72□□□□□ -0.37
PPP4R1-219ENST00000581250 PMS1P54277 932 aaKnown RBP12.72□□□□□ -0.37
PPP4R1-219ENST00000581250 CLDN10P78369 228 aa12.72□□□□□ -0.37
PPP4R1-219ENST00000581250 GRM2Q14416 872 aa12.72□□□□□ -0.37
PPP4R1-219ENST00000581250 NFIL3Q16649 462 aa12.72□□□□□ -0.37
PPP4R1-219ENST00000581250 DDR2Q16832 855 aa12.72□□□□□ -0.37
PPP4R1-219ENST00000581250 ZNF667Q5HYK9 610 aa12.72□□□□□ -0.37
PPP4R1-219ENST00000581250 MDH1BQ5I0G3 518 aa12.72□□□□□ -0.37
PPP4R1-219ENST00000581250 TANGO2Q6ICL3 276 aa12.72□□□□□ -0.37
PPP4R1-219ENST00000581250 SPOPLQ6IQ16 392 aa12.72□□□□□ -0.37
PPP4R1-219ENST00000581250 DPH6Q7L8W6 267 aa12.72□□□□□ -0.37
PPP4R1-219ENST00000581250 SCN4BQ8IWT1 228 aa12.72□□□□□ -0.37
PPP4R1-219ENST00000581250 LEMD2Q8NC56 503 aa12.72□□□□□ -0.37
PPP4R1-219ENST00000581250 SPATA20Q8TB22 786 aa12.72□□□□□ -0.37
PPP4R1-219ENST00000581250 ZSCAN18Q8TBC5 510 aaPredicted RBP12.72□□□□□ -0.37
PPP4R1-219ENST00000581250 TMEM174Q8WUU8 243 aa12.72□□□□□ -0.37
PPP4R1-219ENST00000581250 ASB16Q96NS5 453 aa12.72□□□□□ -0.37
PPP4R1-219ENST00000581250 PLA2G2FQ9BZM2 168 aa12.72□□□□□ -0.37
PPP4R1-219ENST00000581250 ATXN3LQ9H3M9 355 aa12.72□□□□□ -0.37
PPP4R1-219ENST00000581250 DPEP3Q9H4B8 488 aa12.72□□□□□ -0.37
PPP4R1-219ENST00000581250 HSFX1Q9UBD0 423 aa12.72□□□□□ -0.37
PPP4R1-219ENST00000581250 CDH9Q9ULB4 789 aa12.72□□□□□ -0.37
PPP4R1-219ENST00000581250 MAGED2Q9UNF1 606 aaPredicted RBP12.72□□□□□ -0.37
PPP4R1-219ENST00000581250 ASB3Q9Y575 518 aa12.72□□□□□ -0.37
PPP4R1-219ENST00000581250 ZNF638Q14966 1978 aaKnown RBP12.72□□□□□ -0.37
PPP4R1-219ENST00000581250 NCANO14594 1321 aa12.71□□□□□ -0.37
PPP4R1-219ENST00000581250 TICRRQ7Z2Z1 1910 aa12.71□□□□□ -0.37
PPP4R1-219ENST00000581250 KRBA1A5PL33 1030 aa12.71□□□□□ -0.37
PPP4R1-219ENST00000581250 MAPK13O15264 365 aa12.71□□□□□ -0.37
PPP4R1-219ENST00000581250 STAU1O95793 577 aaKnown RBP12.71□□□□□ -0.37
PPP4R1-219ENST00000581250 EPB41P11171 864 aaKnown RBP12.71□□□□□ -0.37
PPP4R1-219ENST00000581250 PSMC2P35998 433 aaKnown RBP12.71□□□□□ -0.37
PPP4R1-219ENST00000581250 GNL1P36915 607 aaPredicted RBP12.71□□□□□ -0.37
PPP4R1-219ENST00000581250 VIPR2P41587 438 aa12.71□□□□□ -0.37
PPP4R1-219ENST00000581250 CDH8P55286 799 aa12.71□□□□□ -0.37
PPP4R1-219ENST00000581250 GPC5P78333 572 aa12.71□□□□□ -0.37
PPP4R1-219ENST00000581250 CYP27A1Q02318 531 aa12.71□□□□□ -0.37
PPP4R1-219ENST00000581250 PPP3CAQ08209 521 aa12.71□□□□□ -0.37
PPP4R1-219ENST00000581250 EDRF1Q3B7T1 1238 aa12.71□□□□□ -0.37
PPP4R1-219ENST00000581250 ZACNQ401N2 412 aa12.71□□□□□ -0.37
PPP4R1-219ENST00000581250 IER5LQ5T953 404 aa12.71□□□□□ -0.37
PPP4R1-219ENST00000581250 CWF19L1Q69YN2 538 aaKnown RBP12.71□□□□□ -0.37
PPP4R1-219ENST00000581250 KLHL10Q6JEL2 608 aa12.71□□□□□ -0.37
PPP4R1-219ENST00000581250 INTS8Q75QN2 995 aaKnown RBP12.71□□□□□ -0.37
PPP4R1-219ENST00000581250 SV2AQ7L0J3 742 aa12.71□□□□□ -0.37
PPP4R1-219ENST00000581250 SMARCD2Q92925 531 aa12.71□□□□□ -0.37
PPP4R1-219ENST00000581250 GCNAQ96QF7 691 aa12.71□□□□□ -0.37
PPP4R1-219ENST00000581250 TSG101Q99816 390 aa12.71□□□□□ -0.37
PPP4R1-219ENST00000581250 SDCBP2Q9H190 292 aa12.71□□□□□ -0.37
PPP4R1-219ENST00000581250 ABCB6Q9NP58 842 aa12.71□□□□□ -0.37
PPP4R1-219ENST00000581250 ARHGEF3Q9NR81 526 aa12.71□□□□□ -0.37
PPP4R1-219ENST00000581250 GREB1Q4ZG55 1949 aa12.7□□□□□ -0.38
PPP4R1-219ENST00000581250 A8MXQ7 604 aa12.7□□□□□ -0.38
PPP4R1-219ENST00000581250 STK25O00506 426 aa12.7□□□□□ -0.38
PPP4R1-219ENST00000581250 CETN3O15182 167 aa12.7□□□□□ -0.38
PPP4R1-219ENST00000581250 TACC1O75410 805 aa12.7□□□□□ -0.38
PPP4R1-219ENST00000581250 ECI2O75521 394 aa12.7□□□□□ -0.38
PPP4R1-219ENST00000581250 MICAL2O94851 1124 aa12.7□□□□□ -0.38
PPP4R1-219ENST00000581250 CD44P16070 742 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms