RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 TSPY1Q01534 308 aa15.73■□□□□ 0.11
FANCA-220ENST00000566409 ANGPT1Q15389 498 aa15.73■□□□□ 0.11
FANCA-220ENST00000566409 INTS6LQ5JSJ4 861 aaKnown RBP15.73■□□□□ 0.11
FANCA-220ENST00000566409 ITIH5Q86UX2 942 aa15.73■□□□□ 0.11
FANCA-220ENST00000566409 ARID3BQ8IVW6 561 aaPredicted RBP15.73■□□□□ 0.11
FANCA-220ENST00000566409 MFSD6LQ8IWD5 586 aa15.73■□□□□ 0.11
FANCA-220ENST00000566409 ADGRF2Q8IZF7 708 aa15.73■□□□□ 0.11
FANCA-220ENST00000566409 STKLD1Q8NE28 680 aa15.73■□□□□ 0.11
FANCA-220ENST00000566409 SHDQ96IW2 340 aa15.73■□□□□ 0.11
FANCA-220ENST00000566409 CGRRF1Q99675 332 aa15.73■□□□□ 0.11
FANCA-220ENST00000566409 PI4K2AQ9BTU6 479 aa15.73■□□□□ 0.11
FANCA-220ENST00000566409 TRMT61BQ9BVS5 477 aaKnown RBP15.73■□□□□ 0.11
FANCA-220ENST00000566409 GPR88Q9GZN0 384 aa15.73■□□□□ 0.11
FANCA-220ENST00000566409 KCTD10Q9H3F6 313 aa15.73■□□□□ 0.11
FANCA-220ENST00000566409 ATXN3LQ9H3M9 355 aa15.73■□□□□ 0.11
FANCA-220ENST00000566409 GOLPH3LQ9H4A5 285 aa15.73■□□□□ 0.11
FANCA-220ENST00000566409 SLITRK6Q9H5Y7 841 aa15.73■□□□□ 0.11
FANCA-220ENST00000566409 GDPD2Q9HCC8 539 aa15.73■□□□□ 0.11
FANCA-220ENST00000566409 DMAC2Q9NW81 257 aa15.73■□□□□ 0.11
FANCA-220ENST00000566409 CGNQ9P2M7 1197 aaKnown RBP15.73■□□□□ 0.11
FANCA-220ENST00000566409 USP25Q9UHP3 1055 aa15.73■□□□□ 0.11
FANCA-220ENST00000566409 NME7Q9Y5B8 376 aa15.73■□□□□ 0.11
FANCA-220ENST00000566409 PCDHB5Q9Y5E4 795 aa15.73■□□□□ 0.11
FANCA-220ENST00000566409 PATJQ8NI35 1801 aa15.73■□□□□ 0.11
FANCA-220ENST00000566409 FANCMQ8IYD8 2048 aa15.72■□□□□ 0.11
FANCA-220ENST00000566409 MYBPHLA2RUH7 354 aa15.72■□□□□ 0.11
FANCA-220ENST00000566409 HEPACAM2A8MVW5 462 aa15.72■□□□□ 0.11
FANCA-220ENST00000566409 ARNTLO00327 626 aa15.72■□□□□ 0.11
FANCA-220ENST00000566409 ATP2C2O75185 946 aa15.72■□□□□ 0.11
FANCA-220ENST00000566409 TNNI1P19237 187 aa15.72■□□□□ 0.11
FANCA-220ENST00000566409 RFX1P22670 979 aa15.72■□□□□ 0.11
FANCA-220ENST00000566409 CYP2F1P24903 491 aa15.72■□□□□ 0.11
FANCA-220ENST00000566409 GDI1P31150 447 aa15.72■□□□□ 0.11
FANCA-220ENST00000566409 NBL1P41271 181 aa15.72■□□□□ 0.11
FANCA-220ENST00000566409 SYKP43405 635 aa15.72■□□□□ 0.11
FANCA-220ENST00000566409 CASP4P49662 377 aa15.72■□□□□ 0.11
FANCA-220ENST00000566409 CYP4F8P98187 520 aa15.72■□□□□ 0.11
FANCA-220ENST00000566409 MYO1EQ12965 1108 aa15.72■□□□□ 0.11
FANCA-220ENST00000566409 PSMD2Q13200 908 aa15.72■□□□□ 0.11
FANCA-220ENST00000566409 FZD5Q13467 585 aa15.72■□□□□ 0.11
FANCA-220ENST00000566409 NFE2Q16621 373 aaPredicted RBP15.72■□□□□ 0.11
FANCA-220ENST00000566409 SDHAF4Q5VUM1 108 aa15.72■□□□□ 0.11
FANCA-220ENST00000566409 DPH6Q7L8W6 267 aa15.72■□□□□ 0.11
FANCA-220ENST00000566409 SPATA18Q8TC71 538 aa15.72■□□□□ 0.11
FANCA-220ENST00000566409 FAM200AQ8TCP9 573 aa15.72■□□□□ 0.11
FANCA-220ENST00000566409 SCAND2PQ9GZW5 306 aaPredicted RBP15.72■□□□□ 0.11
FANCA-220ENST00000566409 BRD9Q9H8M2 597 aa15.72■□□□□ 0.11
FANCA-220ENST00000566409 EXOC1Q9NV70 894 aa15.72■□□□□ 0.11
FANCA-220ENST00000566409 ANAPC1Q9H1A4 1944 aa15.72■□□□□ 0.11
FANCA-220ENST00000566409 KIF26AQ9ULI4 1882 aaPredicted RBP15.71■□□□□ 0.11
FANCA-220ENST00000566409 A0A1W2PQ27 194 aa15.71■□□□□ 0.11
FANCA-220ENST00000566409 A0A1W2PQ64 194 aa15.71■□□□□ 0.11
FANCA-220ENST00000566409 A0A1W2PQD8 194 aa15.71■□□□□ 0.11
FANCA-220ENST00000566409 FAM170BA6NMN3 283 aa15.71■□□□□ 0.11
FANCA-220ENST00000566409 PROB1E7EW31 1015 aa15.71■□□□□ 0.11
FANCA-220ENST00000566409 PRPF40AO75400 957 aaKnown RBP15.71■□□□□ 0.11
FANCA-220ENST00000566409 RPN1P04843 607 aaKnown RBP15.71■□□□□ 0.11
FANCA-220ENST00000566409 TARSP26639 723 aaKnown RBP15.71■□□□□ 0.11
FANCA-220ENST00000566409 LHX1P48742 406 aa15.71■□□□□ 0.11
FANCA-220ENST00000566409 MYL7Q01449 175 aa15.71■□□□□ 0.11
FANCA-220ENST00000566409 VEPH1Q14D04 833 aa15.71■□□□□ 0.11
FANCA-220ENST00000566409 DDR2Q16832 855 aa15.71■□□□□ 0.11
FANCA-220ENST00000566409 GPR158Q5T848 1215 aa15.71■□□□□ 0.11
FANCA-220ENST00000566409 FAM171BQ6P995 826 aa15.71■□□□□ 0.11
FANCA-220ENST00000566409 TPRG1Q6ZUI0 275 aa15.71■□□□□ 0.11
FANCA-220ENST00000566409 ZNF687Q8N1G0 1237 aa15.71■□□□□ 0.11
FANCA-220ENST00000566409 TMEM174Q8WUU8 243 aa15.71■□□□□ 0.11
FANCA-220ENST00000566409 DNASE1L2Q92874 299 aa15.71■□□□□ 0.11
FANCA-220ENST00000566409 FNBP1Q96RU3 617 aa15.71■□□□□ 0.11
FANCA-220ENST00000566409 SLC46A2Q9BY10 475 aa15.71■□□□□ 0.11
FANCA-220ENST00000566409 XYLT2Q9H1B5 865 aa15.71■□□□□ 0.11
FANCA-220ENST00000566409 LTB4R2Q9NPC1 389 aa15.71■□□□□ 0.11
FANCA-220ENST00000566409 CRTAC1Q9NQ79 661 aa15.71■□□□□ 0.11
FANCA-220ENST00000566409 TRPV5Q9NQA5 729 aa15.71■□□□□ 0.11
FANCA-220ENST00000566409 EXOC3O60645 756 aa15.7■□□□□ 0.1
FANCA-220ENST00000566409 PRAMEF12O95522 483 aa15.7■□□□□ 0.1
FANCA-220ENST00000566409 FGF19O95750 216 aa15.7■□□□□ 0.1
FANCA-220ENST00000566409 F11P03951 625 aa15.7■□□□□ 0.1
FANCA-220ENST00000566409 MYL1P05976 194 aa15.7■□□□□ 0.1
FANCA-220ENST00000566409 MYL6P60660 151 aa15.7■□□□□ 0.1
FANCA-220ENST00000566409 CLDN10P78369 228 aa15.7■□□□□ 0.1
FANCA-220ENST00000566409 FCHO2Q0JRZ9 810 aa15.7■□□□□ 0.1
FANCA-220ENST00000566409 DPYDQ12882 1025 aa15.7■□□□□ 0.1
FANCA-220ENST00000566409 UBXN2BQ14CS0 331 aa15.7■□□□□ 0.1
FANCA-220ENST00000566409 KRBA2Q6ZNG9 492 aa15.7■□□□□ 0.1
FANCA-220ENST00000566409 FRMD5Q7Z6J6 570 aa15.7■□□□□ 0.1
FANCA-220ENST00000566409 SLC9A9Q8IVB4 645 aa15.7■□□□□ 0.1
FANCA-220ENST00000566409 MAML2Q8IZL2 1156 aaPredicted RBP15.7■□□□□ 0.1
FANCA-220ENST00000566409 FSIP1Q8NA03 581 aa15.7■□□□□ 0.1
FANCA-220ENST00000566409 PARD3BQ8TEW8 1205 aa15.7■□□□□ 0.1
FANCA-220ENST00000566409 DEPDC1BQ8WUY9 529 aa15.7■□□□□ 0.1
FANCA-220ENST00000566409 IRF7Q92985 503 aa15.7■□□□□ 0.1
FANCA-220ENST00000566409 MRPL45Q9BRJ2 306 aaKnown RBP15.7■□□□□ 0.1
FANCA-220ENST00000566409 OSBPL6Q9BZF3 934 aa15.7■□□□□ 0.1
FANCA-220ENST00000566409 SMG9Q9H0W8 520 aaKnown RBP15.7■□□□□ 0.1
FANCA-220ENST00000566409 TASP1Q9H6P5 420 aa15.7■□□□□ 0.1
FANCA-220ENST00000566409 ABCB6Q9NP58 842 aa15.7■□□□□ 0.1
FANCA-220ENST00000566409 ATP6V1DQ9Y5K8 247 aa15.7■□□□□ 0.1
FANCA-220ENST00000566409 PDXKO00764 312 aa15.69■□□□□ 0.1
FANCA-220ENST00000566409 PDGFRBP09619 1106 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms