RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 DNTTIP2Q5QJE6 756 aaKnown RBP7.41□□□□□ -1.22
SPG11-224ENST00000561268 FAM26FQ5R3K3 315 aa7.41□□□□□ -1.22
SPG11-224ENST00000561268 UNC13DQ70J99 1090 aa7.41□□□□□ -1.22
SPG11-224ENST00000561268 GAREM2Q75VX8 874 aa7.41□□□□□ -1.22
SPG11-224ENST00000561268 CCDC65Q8IXS2 484 aa7.41□□□□□ -1.22
SPG11-224ENST00000561268 GPD1LQ8N335 351 aa7.41□□□□□ -1.22
SPG11-224ENST00000561268 DTWD2Q8NBA8 298 aa7.41□□□□□ -1.22
SPG11-224ENST00000561268 CCDC150Q8NCX0 1101 aa7.41□□□□□ -1.22
SPG11-224ENST00000561268 SHKBP1Q8TBC3 707 aa7.41□□□□□ -1.22
SPG11-224ENST00000561268 ZNF507Q8TCN5 953 aa7.41□□□□□ -1.22
SPG11-224ENST00000561268 SPPL2BQ8TCT7 592 aa7.41□□□□□ -1.22
SPG11-224ENST00000561268 C2orf15Q8WU43 125 aaKnown RBP7.41□□□□□ -1.22
SPG11-224ENST00000561268 ING5Q8WYH8 240 aa7.41□□□□□ -1.22
SPG11-224ENST00000561268 PSMG2Q969U7 264 aa7.41□□□□□ -1.22
SPG11-224ENST00000561268 TMEM209Q96SK2 561 aa7.41□□□□□ -1.22
SPG11-224ENST00000561268 C7orf25Q9BPX7 421 aa7.41□□□□□ -1.22
SPG11-224ENST00000561268 KCNF1Q9H3M0 494 aa7.41□□□□□ -1.22
SPG11-224ENST00000561268 ZHX3Q9H4I2 956 aa7.41□□□□□ -1.22
SPG11-224ENST00000561268 TMEM206Q9H813 350 aa7.41□□□□□ -1.22
SPG11-224ENST00000561268 IL21Q9HBE4 155 aa7.41□□□□□ -1.22
SPG11-224ENST00000561268 CYP4F11Q9HBI6 524 aa7.41□□□□□ -1.22
SPG11-224ENST00000561268 PANK4Q9NVE7 773 aa7.41□□□□□ -1.22
SPG11-224ENST00000561268 DPP3Q9NY33 737 aa7.41□□□□□ -1.22
SPG11-224ENST00000561268 ITGA11Q9UKX5 1188 aa7.41□□□□□ -1.22
SPG11-224ENST00000561268 HPSEQ9Y251 543 aa7.41□□□□□ -1.22
SPG11-224ENST00000561268 MRPS23Q9Y3D9 190 aaKnown RBP7.41□□□□□ -1.22
SPG11-224ENST00000561268 ASB3Q9Y575 518 aa7.41□□□□□ -1.22
SPG11-224ENST00000561268 TIMM13Q9Y5L4 95 aaPredicted RBP7.41□□□□□ -1.22
SPG11-224ENST00000561268 CFAP54Q96N23 3096 aa7.41□□□□□ -1.22
SPG11-224ENST00000561268 DMDP11532 3685 aa7.4□□□□□ -1.22
SPG11-224ENST00000561268 PTPRZ1P23471 2315 aaPredicted RBP7.4□□□□□ -1.22
SPG11-224ENST00000561268 KANSL1LA0AUZ9 987 aa7.4□□□□□ -1.22
SPG11-224ENST00000561268 PRR23AA6NEV1 266 aa7.4□□□□□ -1.22
SPG11-224ENST00000561268 KPNA7A9QM74 516 aa7.4□□□□□ -1.22
SPG11-224ENST00000561268 GABRDO14764 452 aa7.4□□□□□ -1.22
SPG11-224ENST00000561268 TGFB1I1O43294 461 aa7.4□□□□□ -1.22
SPG11-224ENST00000561268 KLRC4O43908 158 aa7.4□□□□□ -1.22
SPG11-224ENST00000561268 TADA3O75528 432 aa7.4□□□□□ -1.22
SPG11-224ENST00000561268 STAU1O95793 577 aaKnown RBP7.4□□□□□ -1.22
SPG11-224ENST00000561268 IDEP14735 1019 aa7.4□□□□□ -1.22
SPG11-224ENST00000561268 CMA1P23946 247 aa7.4□□□□□ -1.22
SPG11-224ENST00000561268 ELF1P32519 619 aa7.4□□□□□ -1.22
SPG11-224ENST00000561268 MLLT6P55198 1093 aaPredicted RBP7.4□□□□□ -1.22
SPG11-224ENST00000561268 SNRPFP62306 86 aaKnown RBP7.4□□□□□ -1.22
SPG11-224ENST00000561268 GPC5P78333 572 aa7.4□□□□□ -1.22
SPG11-224ENST00000561268 PFKPQ01813 784 aa7.4□□□□□ -1.22
SPG11-224ENST00000561268 FZD5Q13467 585 aa7.4□□□□□ -1.22
SPG11-224ENST00000561268 FAM78AQ5JUQ0 283 aa7.4□□□□□ -1.22
SPG11-224ENST00000561268 ARMCX5Q6P1M9 558 aa7.4□□□□□ -1.22
SPG11-224ENST00000561268 VITQ6UXI7 678 aa7.4□□□□□ -1.22
SPG11-224ENST00000561268 PDZD4Q76G19 769 aaPredicted RBP7.4□□□□□ -1.22
SPG11-224ENST00000561268 USP37Q86T82 979 aa7.4□□□□□ -1.22
SPG11-224ENST00000561268 ALYREFQ86V81 257 aaKnown RBP7.4□□□□□ -1.22
SPG11-224ENST00000561268 HS6ST3Q8IZP7 471 aa7.4□□□□□ -1.22
SPG11-224ENST00000561268 FMR1NBQ8N0W7 255 aaPredicted RBP7.4□□□□□ -1.22
SPG11-224ENST00000561268 PDILTQ8N807 584 aa7.4□□□□□ -1.22
SPG11-224ENST00000561268 IQUBQ8NA54 791 aa7.4□□□□□ -1.22
SPG11-224ENST00000561268 CCDC112Q8NEF3 446 aa7.4□□□□□ -1.22
SPG11-224ENST00000561268 DEPDC1BQ8WUY9 529 aa7.4□□□□□ -1.22
SPG11-224ENST00000561268 PTCD2Q8WV60 388 aaKnown RBP7.4□□□□□ -1.22
SPG11-224ENST00000561268 SCFD1Q8WVM8 642 aa7.4□□□□□ -1.22
SPG11-224ENST00000561268 NELL1Q92832 810 aa7.4□□□□□ -1.22
SPG11-224ENST00000561268 SMARCD2Q92925 531 aa7.4□□□□□ -1.22
SPG11-224ENST00000561268 CLDN23Q96B33 292 aa7.4□□□□□ -1.22
SPG11-224ENST00000561268 SAAL1Q96ER3 474 aa7.4□□□□□ -1.22
SPG11-224ENST00000561268 CHAMP1Q96JM3 812 aa7.4□□□□□ -1.22
SPG11-224ENST00000561268 KXD1Q9BQD3 176 aa7.4□□□□□ -1.22
SPG11-224ENST00000561268 CORO1BQ9BR76 489 aa7.4□□□□□ -1.22
SPG11-224ENST00000561268 GTPBP4Q9BZE4 634 aaKnown RBP7.4□□□□□ -1.22
SPG11-224ENST00000561268 PLA2G2FQ9BZM2 168 aa7.4□□□□□ -1.22
SPG11-224ENST00000561268 TRIM5Q9C035 493 aa7.4□□□□□ -1.22
SPG11-224ENST00000561268 MTMR12Q9C0I1 747 aa7.4□□□□□ -1.22
SPG11-224ENST00000561268 LRRC27Q9C0I9 530 aa7.4□□□□□ -1.22
SPG11-224ENST00000561268 MFSD1Q9H3U5 465 aa7.4□□□□□ -1.22
SPG11-224ENST00000561268 ZNF334Q9HCZ1 680 aaPredicted RBP7.4□□□□□ -1.22
SPG11-224ENST00000561268 ABCB6Q9NP58 842 aa7.4□□□□□ -1.22
SPG11-224ENST00000561268 LTB4R2Q9NPC1 389 aa7.4□□□□□ -1.22
SPG11-224ENST00000561268 ASAH2Q9NR71 780 aa7.4□□□□□ -1.22
SPG11-224ENST00000561268 INTS13Q9NVM9 706 aa7.4□□□□□ -1.22
SPG11-224ENST00000561268 OBP2AQ9NY56 170 aa7.4□□□□□ -1.22
SPG11-224ENST00000561268 RBAKQ9NYW8 714 aaPredicted RBP7.4□□□□□ -1.22
SPG11-224ENST00000561268 FBXL21Q9UKT6 434 aa7.4□□□□□ -1.22
SPG11-224ENST00000561268 CA14Q9ULX7 337 aa7.4□□□□□ -1.22
SPG11-224ENST00000561268 PCDHA7Q9UN72 937 aa7.4□□□□□ -1.22
SPG11-224ENST00000561268 L1RE1Q9UN81 338 aa7.4□□□□□ -1.22
SPG11-224ENST00000561268 POLIQ9UNA4 740 aa7.4□□□□□ -1.22
SPG11-224ENST00000561268 GPR179Q6PRD1 2367 aa7.4□□□□□ -1.23
SPG11-224ENST00000561268 EP300Q09472 2414 aaPredicted RBP7.4□□□□□ -1.23
SPG11-224ENST00000561268 CEP250Q9BV73 2442 aa7.4□□□□□ -1.23
SPG11-224ENST00000561268 CACNA1AO00555 2505 aa7.4□□□□□ -1.23
SPG11-224ENST00000561268 SPTBN4Q9H254 2564 aa7.4□□□□□ -1.23
SPG11-224ENST00000561268 ZNF292O60281 2723 aa7.39□□□□□ -1.23
SPG11-224ENST00000561268 CKAP5Q14008 2032 aa7.39□□□□□ -1.23
SPG11-224ENST00000561268 TP53BP1Q12888 1972 aaPredicted RBP7.39□□□□□ -1.23
SPG11-224ENST00000561268 PVALEFA0A1B0GWK0 134 aa7.39□□□□□ -1.23
SPG11-224ENST00000561268 SOBPA7XYQ1 873 aa7.39□□□□□ -1.23
SPG11-224ENST00000561268 CYB561D2O14569 222 aa7.39□□□□□ -1.23
SPG11-224ENST00000561268 AP5Z1O43299 807 aa7.39□□□□□ -1.23
SPG11-224ENST00000561268 PRPF6O94906 941 aaKnown RBP7.39□□□□□ -1.23
SPG11-224ENST00000561268 ITGB3P05106 788 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms