RNA–Protein interactions for RNA: ENST00000560457.5

DCAF11-229, Transcript of DDB1 and CUL4 associated factor 11, human

TSL 3

Gene DCAF11, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DCAF11-229	ENST00000560457	RALA	P11233	206 aa		13.57	□□□□□ -0.24
DCAF11-229	ENST00000560457	DARS	P14868	501 aa	Known RBP	13.57	□□□□□ -0.24
DCAF11-229	ENST00000560457	DES	P17661	470 aa		13.57	□□□□□ -0.24
DCAF11-229	ENST00000560457	RPL21	P46778	160 aa	Known RBP	13.57	□□□□□ -0.24
DCAF11-229	ENST00000560457	HUNK	P57058	714 aa		13.57	□□□□□ -0.24
DCAF11-229	ENST00000560457	PSMC1	P62191	440 aa	Known RBP	13.57	□□□□□ -0.24
DCAF11-229	ENST00000560457	ZNF844	Q08AG5	666 aa		13.57	□□□□□ -0.24
DCAF11-229	ENST00000560457	ZSCAN26	Q16670	478 aa		13.57	□□□□□ -0.24
DCAF11-229	ENST00000560457	DENND2C	Q68D51	928 aa		13.57	□□□□□ -0.24
DCAF11-229	ENST00000560457	ZNF365	Q70YC5	407 aa		13.57	□□□□□ -0.24
DCAF11-229	ENST00000560457	UNC93A	Q86WB7	457 aa		13.57	□□□□□ -0.24
DCAF11-229	ENST00000560457	TTC13	Q8NBP0	860 aa		13.57	□□□□□ -0.24
DCAF11-229	ENST00000560457	FBXO25	Q8TCJ0	367 aa		13.57	□□□□□ -0.24
DCAF11-229	ENST00000560457	C1orf54	Q8WWF1	131 aa		13.57	□□□□□ -0.24
DCAF11-229	ENST00000560457	USP6NL	Q92738	828 aa		13.57	□□□□□ -0.24
DCAF11-229	ENST00000560457	SNF8	Q96H20	258 aa		13.57	□□□□□ -0.24
DCAF11-229	ENST00000560457	CAPNS2	Q96L46	248 aa		13.57	□□□□□ -0.24
DCAF11-229	ENST00000560457	HEXIM2	Q96MH2	286 aa	Known RBP	13.57	□□□□□ -0.24
DCAF11-229	ENST00000560457	MCEE	Q96PE7	176 aa		13.57	□□□□□ -0.24
DCAF11-229	ENST00000560457	NT5C1A	Q9BXI3	368 aa		13.57	□□□□□ -0.24
DCAF11-229	ENST00000560457	ROPN1B	Q9BZX4	212 aa	Predicted RBP	13.57	□□□□□ -0.24
DCAF11-229	ENST00000560457	SDCBP2	Q9H190	292 aa		13.57	□□□□□ -0.24
DCAF11-229	ENST00000560457	ROPN1	Q9HAT0	212 aa	Predicted RBP	13.57	□□□□□ -0.24
DCAF11-229	ENST00000560457	CPA4	Q9UI42	421 aa		13.57	□□□□□ -0.24
DCAF11-229	ENST00000560457	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	13.57	□□□□□ -0.24
DCAF11-229	ENST00000560457	ATP8A1	Q9Y2Q0	1164 aa		13.57	□□□□□ -0.24
DCAF11-229	ENST00000560457	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	13.57	□□□□□ -0.24
DCAF11-229	ENST00000560457	MICAL2	O94851	1124 aa		13.56	□□□□□ -0.24
DCAF11-229	ENST00000560457	NPTXR	O95502	500 aa		13.56	□□□□□ -0.24
DCAF11-229	ENST00000560457	KRT1	P04264	644 aa		13.56	□□□□□ -0.24
DCAF11-229	ENST00000560457	RPLP2	P05387	115 aa	Known RBP	13.56	□□□□□ -0.24
DCAF11-229	ENST00000560457	FAM163B	P0C2L3	166 aa		13.56	□□□□□ -0.24
DCAF11-229	ENST00000560457	ATF2	P15336	505 aa		13.56	□□□□□ -0.24
DCAF11-229	ENST00000560457	NR1D1	P20393	614 aa		13.56	□□□□□ -0.24
DCAF11-229	ENST00000560457	PSMA2	P25787	234 aa		13.56	□□□□□ -0.24
DCAF11-229	ENST00000560457	RDX	P35241	583 aa	Known RBP	13.56	□□□□□ -0.24
DCAF11-229	ENST00000560457	FLT3	P36888	993 aa		13.56	□□□□□ -0.24
DCAF11-229	ENST00000560457	PNPLA4	P41247	253 aa		13.56	□□□□□ -0.24
DCAF11-229	ENST00000560457	RPL7A	P62424	266 aa	Known RBP	13.56	□□□□□ -0.24
DCAF11-229	ENST00000560457	ADCY2	Q08462	1091 aa		13.56	□□□□□ -0.24
DCAF11-229	ENST00000560457	TAF1C	Q15572	869 aa	Predicted RBP	13.56	□□□□□ -0.24
DCAF11-229	ENST00000560457	ZBTB6	Q15916	424 aa		13.56	□□□□□ -0.24
DCAF11-229	ENST00000560457	C2CD6	Q53TS8	623 aa		13.56	□□□□□ -0.24
DCAF11-229	ENST00000560457	ZFYVE27	Q5T4F4	411 aa		13.56	□□□□□ -0.24
DCAF11-229	ENST00000560457	C6orf118	Q5T5N4	469 aa		13.56	□□□□□ -0.24
DCAF11-229	ENST00000560457	SCARA3	Q6AZY7	606 aa		13.56	□□□□□ -0.24
DCAF11-229	ENST00000560457	LCLAT1	Q6UWP7	414 aa		13.56	□□□□□ -0.24
DCAF11-229	ENST00000560457	C17orf99	Q6UX52	265 aa		13.56	□□□□□ -0.24
DCAF11-229	ENST00000560457	TLK2	Q86UE8	772 aa		13.56	□□□□□ -0.24
DCAF11-229	ENST00000560457	MCRS1	Q96EZ8	462 aa		13.56	□□□□□ -0.24
DCAF11-229	ENST00000560457	SNX27	Q96L92	541 aa		13.56	□□□□□ -0.24
DCAF11-229	ENST00000560457	SLITRK1	Q96PX8	696 aa		13.56	□□□□□ -0.24
DCAF11-229	ENST00000560457	ZIC5	Q96T25	663 aa		13.56	□□□□□ -0.24
DCAF11-229	ENST00000560457	TRAIP	Q9BWF2	469 aa		13.56	□□□□□ -0.24
DCAF11-229	ENST00000560457	ELOVL4	Q9GZR5	314 aa		13.56	□□□□□ -0.24
DCAF11-229	ENST00000560457	SMYD3	Q9H7B4	428 aa		13.56	□□□□□ -0.24
DCAF11-229	ENST00000560457	ZFYVE28	Q9HCC9	887 aa		13.56	□□□□□ -0.24
DCAF11-229	ENST00000560457	ASNSD1	Q9NWL6	643 aa		13.56	□□□□□ -0.24
DCAF11-229	ENST00000560457	ASIC3	Q9UHC3	531 aa		13.56	□□□□□ -0.24
DCAF11-229	ENST00000560457	UBQLN1	Q9UMX0	589 aa	Known RBP	13.56	□□□□□ -0.24
DCAF11-229	ENST00000560457		O00370	1275 aa		13.55	□□□□□ -0.24
DCAF11-229	ENST00000560457	MEFV	O15553	781 aa	Predicted RBP	13.55	□□□□□ -0.24
DCAF11-229	ENST00000560457	AOC2	O75106	756 aa		13.55	□□□□□ -0.24
DCAF11-229	ENST00000560457	CSDE1	O75534	798 aa	Known RBP	13.55	□□□□□ -0.24
DCAF11-229	ENST00000560457	RNF8	O76064	485 aa		13.55	□□□□□ -0.24
DCAF11-229	ENST00000560457	CYP3A5	P20815	502 aa		13.55	□□□□□ -0.24
DCAF11-229	ENST00000560457	HOXA11	P31270	313 aa	Predicted RBP	13.55	□□□□□ -0.24
DCAF11-229	ENST00000560457	RAP1GAP	P47736	663 aa		13.55	□□□□□ -0.24
DCAF11-229	ENST00000560457	KCNJ1	P48048	391 aa		13.55	□□□□□ -0.24
DCAF11-229	ENST00000560457	IRAK1	P51617	712 aa		13.55	□□□□□ -0.24
DCAF11-229	ENST00000560457	ZNF157	P51786	506 aa	Predicted RBP	13.55	□□□□□ -0.24
DCAF11-229	ENST00000560457	NDST1	P52848	882 aa		13.55	□□□□□ -0.24
DCAF11-229	ENST00000560457	CRYBB1	P53674	252 aa	Predicted RBP	13.55	□□□□□ -0.24
DCAF11-229	ENST00000560457	CDH8	P55286	799 aa		13.55	□□□□□ -0.24
DCAF11-229	ENST00000560457	ADAM17	P78536	824 aa		13.55	□□□□□ -0.24
DCAF11-229	ENST00000560457	BYSL	Q13895	437 aa	Known RBP	13.55	□□□□□ -0.24
DCAF11-229	ENST00000560457	KIZ	Q2M2Z5	673 aa		13.55	□□□□□ -0.24
DCAF11-229	ENST00000560457	KRT71	Q3SY84	523 aa		13.55	□□□□□ -0.24
DCAF11-229	ENST00000560457	PTPN20	Q4JDL3	420 aa		13.55	□□□□□ -0.24
DCAF11-229	ENST00000560457	TFDP3	Q5H9I0	405 aa		13.55	□□□□□ -0.24
DCAF11-229	ENST00000560457	LLGL2	Q6P1M3	1020 aa		13.55	□□□□□ -0.24
DCAF11-229	ENST00000560457	SPOCD1	Q6ZMY3	1216 aa		13.55	□□□□□ -0.24
DCAF11-229	ENST00000560457	XYLT1	Q86Y38	959 aa		13.55	□□□□□ -0.24
DCAF11-229	ENST00000560457	RASAL3	Q86YV0	1011 aa		13.55	□□□□□ -0.24
DCAF11-229	ENST00000560457	STK32A	Q8WU08	396 aa		13.55	□□□□□ -0.24
DCAF11-229	ENST00000560457	KAT2B	Q92831	832 aa		13.55	□□□□□ -0.24
DCAF11-229	ENST00000560457	PGM2	Q96G03	612 aa		13.55	□□□□□ -0.24
DCAF11-229	ENST00000560457	PPP1R16B	Q96T49	567 aa		13.55	□□□□□ -0.24
DCAF11-229	ENST00000560457	APBA2	Q99767	749 aa		13.55	□□□□□ -0.24
DCAF11-229	ENST00000560457	TRIM6	Q9C030	488 aa	Predicted RBP	13.55	□□□□□ -0.24
DCAF11-229	ENST00000560457	CNOT10	Q9H9A5	744 aa	Known RBP	13.55	□□□□□ -0.24
DCAF11-229	ENST00000560457	CNTN3	Q9P232	1028 aa		13.55	□□□□□ -0.24
DCAF11-229	ENST00000560457	ANAPC5	Q9UJX4	755 aa		13.55	□□□□□ -0.24
DCAF11-229	ENST00000560457	PTPN22	Q9Y2R2	807 aa		13.55	□□□□□ -0.24
DCAF11-229	ENST00000560457	ANK1	P16157	1881 aa		13.55	□□□□□ -0.24
DCAF11-229	ENST00000560457	C17orf102	A2RUQ5	167 aa		13.54	□□□□□ -0.24
DCAF11-229	ENST00000560457	ERICH4	A6NGS2	130 aa		13.54	□□□□□ -0.24
DCAF11-229	ENST00000560457	FAM155A	B1AL88	458 aa	Predicted RBP	13.54	□□□□□ -0.24
DCAF11-229	ENST00000560457		M0QYV0	167 aa		13.54	□□□□□ -0.24
DCAF11-229	ENST00000560457	SSTR3	P32745	418 aa	Predicted RBP	13.54	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms