RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 LPIN3Q9BQK8 851 aa16.94■□□□□ 0.3
RABGGTA-206ENST00000558649 APOBEC3GQ9HC16 384 aaKnown RBP16.94■□□□□ 0.3
RABGGTA-206ENST00000558649 CRTAC1Q9NQ79 661 aa16.94■□□□□ 0.3
RABGGTA-206ENST00000558649 NME7Q9Y5B8 376 aa16.94■□□□□ 0.3
RABGGTA-206ENST00000558649 N4BP1O75113 896 aaKnown RBP16.93■□□□□ 0.3
RABGGTA-206ENST00000558649 GNA14O95837 355 aa16.93■□□□□ 0.3
RABGGTA-206ENST00000558649 POU2F2P09086 479 aa16.93■□□□□ 0.3
RABGGTA-206ENST00000558649 CCDC192P0DO97 292 aa16.93■□□□□ 0.3
RABGGTA-206ENST00000558649 MYL4P12829 197 aa16.93■□□□□ 0.3
RABGGTA-206ENST00000558649 SMARCB1Q12824 385 aa16.93■□□□□ 0.3
RABGGTA-206ENST00000558649 ORC1Q13415 861 aa16.93■□□□□ 0.3
RABGGTA-206ENST00000558649 SASS6Q6UVJ0 657 aa16.93■□□□□ 0.3
RABGGTA-206ENST00000558649 RNF135Q8IUD6 432 aa16.93■□□□□ 0.3
RABGGTA-206ENST00000558649 HS6ST3Q8IZP7 471 aa16.93■□□□□ 0.3
RABGGTA-206ENST00000558649 ITFG1Q8TB96 612 aa16.93■□□□□ 0.3
RABGGTA-206ENST00000558649 GPR152Q8TDT2 470 aa16.93■□□□□ 0.3
RABGGTA-206ENST00000558649 GIPC2Q8TF65 315 aa16.93■□□□□ 0.3
RABGGTA-206ENST00000558649 MYLPFQ96A32 169 aa16.93■□□□□ 0.3
RABGGTA-206ENST00000558649 CNOT6LQ96LI5 555 aaKnown RBP16.93■□□□□ 0.3
RABGGTA-206ENST00000558649 MYADMQ96S97 322 aa16.93■□□□□ 0.3
RABGGTA-206ENST00000558649 PKMYT1Q99640 499 aa16.93■□□□□ 0.3
RABGGTA-206ENST00000558649 NIF3L1Q9GZT8 377 aa16.93■□□□□ 0.3
RABGGTA-206ENST00000558649 RAB20Q9NX57 234 aa16.93■□□□□ 0.3
RABGGTA-206ENST00000558649 HAPLN1P10915 354 aaPredicted RBP16.92■□□□□ 0.3
RABGGTA-206ENST00000558649 ATF6P18850 670 aa16.92■□□□□ 0.3
RABGGTA-206ENST00000558649 CD58P19256 250 aa16.92■□□□□ 0.3
RABGGTA-206ENST00000558649 CYP2F1P24903 491 aa16.92■□□□□ 0.3
RABGGTA-206ENST00000558649 FMO5P49326 533 aa16.92■□□□□ 0.3
RABGGTA-206ENST00000558649 TUFMP49411 452 aaKnown RBP16.92■□□□□ 0.3
RABGGTA-206ENST00000558649 GPR15P49685 360 aa16.92■□□□□ 0.3
RABGGTA-206ENST00000558649 MCCD1P59942 119 aaPredicted RBP16.92■□□□□ 0.3
RABGGTA-206ENST00000558649 SLC5A9Q2M3M2 681 aa16.92■□□□□ 0.3
RABGGTA-206ENST00000558649 HSP90AA4PQ58FG1 418 aa16.92■□□□□ 0.3
RABGGTA-206ENST00000558649 WDR44Q5JSH3 913 aa16.92■□□□□ 0.3
RABGGTA-206ENST00000558649 SDHAF4Q5VUM1 108 aa16.92■□□□□ 0.3
RABGGTA-206ENST00000558649 CAVIN1Q6NZI2 390 aaKnown RBP16.92■□□□□ 0.3
RABGGTA-206ENST00000558649 C4orf50Q6ZRC1 276 aa16.92■□□□□ 0.3
RABGGTA-206ENST00000558649 RBM43Q6ZSC3 357 aaKnown RBP16.92■□□□□ 0.3
RABGGTA-206ENST00000558649 PDZD4Q76G19 769 aaPredicted RBP16.92■□□□□ 0.3
RABGGTA-206ENST00000558649 STKLD1Q8NE28 680 aa16.92■□□□□ 0.3
RABGGTA-206ENST00000558649 ST13P5Q8NFI4 369 aaPredicted RBP16.92■□□□□ 0.3
RABGGTA-206ENST00000558649 KHSRPQ92945 711 aaKnown RBP eCLIP16.92■□□□□ 0.3
RABGGTA-206ENST00000558649 DNAJC25Q9H1X3 360 aa16.92■□□□□ 0.3
RABGGTA-206ENST00000558649 ASAH2Q9NR71 780 aa16.92■□□□□ 0.3
RABGGTA-206ENST00000558649 TMEM63CQ9P1W3 806 aa16.92■□□□□ 0.3
RABGGTA-206ENST00000558649 LIMD1Q9UGP4 676 aa16.92■□□□□ 0.3
RABGGTA-206ENST00000558649 HMGXB4Q9UGU5 601 aa16.92■□□□□ 0.3
RABGGTA-206ENST00000558649 MUTYHQ9UIF7 546 aa16.92■□□□□ 0.3
RABGGTA-206ENST00000558649 USTQ9Y2C2 406 aa16.92■□□□□ 0.3
RABGGTA-206ENST00000558649 MRPS23Q9Y3D9 190 aaKnown RBP16.92■□□□□ 0.3
RABGGTA-206ENST00000558649 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.92■□□□□ 0.3
RABGGTA-206ENST00000558649 NOTCH4Q99466 2003 aa16.92■□□□□ 0.3
RABGGTA-206ENST00000558649 ASGR2P07307 311 aa16.91■□□□□ 0.3
RABGGTA-206ENST00000558649 PTPN1P18031 435 aaKnown RBP16.91■□□□□ 0.3
RABGGTA-206ENST00000558649 LRMPQ12912 555 aa16.91■□□□□ 0.3
RABGGTA-206ENST00000558649 VEPH1Q14D04 833 aa16.91■□□□□ 0.3
RABGGTA-206ENST00000558649 MAPRE1Q15691 268 aaKnown RBP16.91■□□□□ 0.3
RABGGTA-206ENST00000558649 TAF12Q16514 161 aa16.91■□□□□ 0.3
RABGGTA-206ENST00000558649 CYP4A22Q5TCH4 519 aa16.91■□□□□ 0.3
RABGGTA-206ENST00000558649 FAM171BQ6P995 826 aa16.91■□□□□ 0.3
RABGGTA-206ENST00000558649 TRIM59Q8IWR1 403 aa16.91■□□□□ 0.3
RABGGTA-206ENST00000558649 SCN4BQ8IWT1 228 aa16.91■□□□□ 0.3
RABGGTA-206ENST00000558649 B3GALNT2Q8NCR0 500 aa16.91■□□□□ 0.3
RABGGTA-206ENST00000558649 MYCBPAPQ8TBZ2 947 aa16.91■□□□□ 0.3
RABGGTA-206ENST00000558649 TCEAL4Q96EI5 215 aa16.91■□□□□ 0.3
RABGGTA-206ENST00000558649 PCED1BQ96HM7 432 aa16.91■□□□□ 0.3
RABGGTA-206ENST00000558649 BCO2Q9BYV7 579 aa16.91■□□□□ 0.3
RABGGTA-206ENST00000558649 HSFX1Q9UBD0 423 aa16.91■□□□□ 0.3
RABGGTA-206ENST00000558649 MAGEC2Q9UBF1 373 aaPredicted RBP16.91■□□□□ 0.3
RABGGTA-206ENST00000558649 PTPRDP23468 1912 aa16.91■□□□□ 0.3
RABGGTA-206ENST00000558649 FAM163BP0C2L3 166 aa16.9■□□□□ 0.3
RABGGTA-206ENST00000558649 GJA1P17302 382 aa16.9■□□□□ 0.3
RABGGTA-206ENST00000558649 CEBPBP17676 345 aa16.9■□□□□ 0.3
RABGGTA-206ENST00000558649 BDNFP23560 247 aa16.9■□□□□ 0.3
RABGGTA-206ENST00000558649 ERCC5P28715 1186 aaPredicted RBP16.9■□□□□ 0.3
RABGGTA-206ENST00000558649 NDST1P52848 882 aa16.9■□□□□ 0.3
RABGGTA-206ENST00000558649 KCNH2Q12809 1159 aa16.9■□□□□ 0.3
RABGGTA-206ENST00000558649 DDR2Q16832 855 aa16.9■□□□□ 0.3
RABGGTA-206ENST00000558649 ACOT1Q86TX2 421 aa16.9■□□□□ 0.3
RABGGTA-206ENST00000558649 ITIH5Q86UX2 942 aa16.9■□□□□ 0.3
RABGGTA-206ENST00000558649 PLCD3Q8N3E9 789 aa16.9■□□□□ 0.3
RABGGTA-206ENST00000558649 TATDN2Q93075 761 aa16.9■□□□□ 0.3
RABGGTA-206ENST00000558649 ARID3AQ99856 593 aa16.9■□□□□ 0.3
RABGGTA-206ENST00000558649 MED10Q9BTT4 135 aa16.9■□□□□ 0.3
RABGGTA-206ENST00000558649 ABCB6Q9NP58 842 aa16.9■□□□□ 0.3
RABGGTA-206ENST00000558649 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.9■□□□□ 0.3
RABGGTA-206ENST00000558649 MAGED2Q9UNF1 606 aaPredicted RBP16.9■□□□□ 0.3
RABGGTA-206ENST00000558649 CLDN5O00501 218 aa16.89■□□□□ 0.29
RABGGTA-206ENST00000558649 AFPP02771 609 aaKnown RBP16.89■□□□□ 0.29
RABGGTA-206ENST00000558649 CCR2P41597 374 aa16.89■□□□□ 0.29
RABGGTA-206ENST00000558649 MTIF2P46199 727 aaKnown RBP16.89■□□□□ 0.29
RABGGTA-206ENST00000558649 MARSP56192 900 aaKnown RBP16.89■□□□□ 0.29
RABGGTA-206ENST00000558649 CETN1Q12798 172 aa16.89■□□□□ 0.29
RABGGTA-206ENST00000558649 STX1AQ16623 288 aa16.89■□□□□ 0.29
RABGGTA-206ENST00000558649 CFAP221Q4G0U5 840 aa16.89■□□□□ 0.29
RABGGTA-206ENST00000558649 C11orf57Q6ZUT1 292 aaPredicted RBP16.89■□□□□ 0.29
RABGGTA-206ENST00000558649 DNAJB7Q7Z6W7 309 aaPredicted RBP16.89■□□□□ 0.29
RABGGTA-206ENST00000558649 ZDHHC14Q8IZN3 488 aa16.89■□□□□ 0.29
RABGGTA-206ENST00000558649 FGF13Q92913 245 aa16.89■□□□□ 0.29
RABGGTA-206ENST00000558649 PSMG2Q969U7 264 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms