RNA–Protein interactions for RNA: ENST00000556626.5

SPTB-208, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best) BASIC

Gene SPTB, Length 10,153 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-208ENST00000556626 TBC1D10CQ8IV04 446 aa11.29□□□□□ -0.6
SPTB-208ENST00000556626 F8VZ95 297 aa11.29□□□□□ -0.6
SPTB-208ENST00000556626 HIST1H2AGP0C0S8 130 aaPredicted RBP11.29□□□□□ -0.6
SPTB-208ENST00000556626 HIST1H2ADP20671 130 aa11.29□□□□□ -0.6
SPTB-208ENST00000556626 C21orf59P57076 290 aa11.29□□□□□ -0.6
SPTB-208ENST00000556626 CHRNB3Q05901 458 aa11.29□□□□□ -0.6
SPTB-208ENST00000556626 HIST1H2AHQ96KK5 128 aa11.29□□□□□ -0.6
SPTB-208ENST00000556626 HIST1H2AJQ99878 128 aa11.29□□□□□ -0.6
SPTB-208ENST00000556626 H2AFJQ9BTM1 129 aa11.29□□□□□ -0.6
SPTB-208ENST00000556626 L2HGDHQ9H9P8 463 aa11.29□□□□□ -0.6
SPTB-208ENST00000556626 KCND2Q9NZV8 630 aa11.29□□□□□ -0.6
SPTB-208ENST00000556626 AGO2Q9UKV8 859 aaKnown RBP11.29□□□□□ -0.6
SPTB-208ENST00000556626 SMIM31A0A1B0GVY4 71 aa11.29□□□□□ -0.6
SPTB-208ENST00000556626 CATSPER4Q7RTX7 472 aa11.29□□□□□ -0.6
SPTB-208ENST00000556626 SCN4BQ8IWT1 228 aa11.29□□□□□ -0.6
SPTB-208ENST00000556626 AGAP3Q96P47 875 aa11.29□□□□□ -0.6
SPTB-208ENST00000556626 TIPINQ9BVW5 301 aa11.29□□□□□ -0.6
SPTB-208ENST00000556626 TMEM117Q9H0C3 514 aa11.29□□□□□ -0.6
SPTB-208ENST00000556626 LATS2Q9NRM7 1088 aa11.29□□□□□ -0.6
SPTB-208ENST00000556626 MFN2O95140 757 aa11.28□□□□□ -0.6
SPTB-208ENST00000556626 PTPN4P29074 926 aa11.28□□□□□ -0.6
SPTB-208ENST00000556626 TWF2Q6IBS0 349 aaKnown RBP11.28□□□□□ -0.6
SPTB-208ENST00000556626 APPL2Q8NEU8 664 aa11.28□□□□□ -0.6
SPTB-208ENST00000556626 C7orf25Q9BPX7 421 aa11.28□□□□□ -0.6
SPTB-208ENST00000556626 TUFT1Q9NNX1 390 aa11.28□□□□□ -0.6
SPTB-208ENST00000556626 C6orf203Q9P0P8 240 aaPredicted RBP11.28□□□□□ -0.6
SPTB-208ENST00000556626 C15orf41Q9Y2V0 281 aa11.28□□□□□ -0.6
SPTB-208ENST00000556626 DLG5Q8TDM6 1919 aa11.28□□□□□ -0.6
SPTB-208ENST00000556626 INO80Q9ULG1 1556 aaPredicted RBP11.28□□□□□ -0.6
SPTB-208ENST00000556626 RRM2P31350 389 aa11.28□□□□□ -0.6
SPTB-208ENST00000556626 FMR1Q06787 632 aaKnown RBP eCLIP11.28□□□□□ -0.69e-7■■■■■ 27.8
SPTB-208ENST00000556626 QKIQ96PU8 341 aaKnown RBP eCLIP11.28□□□□□ -0.63e-7■■■■■ 29.8
SPTB-208ENST00000556626 SIK2Q9H0K1 926 aa11.28□□□□□ -0.6
SPTB-208ENST00000556626 TAGLN3Q9UI15 199 aa11.28□□□□□ -0.6
SPTB-208ENST00000556626 MED14O60244 1454 aa11.28□□□□□ -0.6
SPTB-208ENST00000556626 ABCA9Q8IUA7 1624 aa11.28□□□□□ -0.6
SPTB-208ENST00000556626 LOC100653049A0A140TA62 436 aa11.28□□□□□ -0.6
SPTB-208ENST00000556626 KRT34O76011 436 aa11.28□□□□□ -0.6
SPTB-208ENST00000556626 LCP1P13796 627 aa11.28□□□□□ -0.6
SPTB-208ENST00000556626 PTK6Q13882 451 aa11.28□□□□□ -0.6
SPTB-208ENST00000556626 MROH9Q5TGP6 573 aa11.28□□□□□ -0.6
SPTB-208ENST00000556626 SEL1L3Q68CR1 1132 aa11.28□□□□□ -0.6
SPTB-208ENST00000556626 SLC16A1P53985 500 aa11.28□□□□□ -0.6
SPTB-208ENST00000556626 DDR2Q16832 855 aa11.28□□□□□ -0.6
SPTB-208ENST00000556626 MTDHQ86UE4 582 aaKnown RBP11.28□□□□□ -0.6
SPTB-208ENST00000556626 LRRC34Q8IZ02 419 aa11.28□□□□□ -0.6
SPTB-208ENST00000556626 EPS8L3Q8TE67 593 aaKnown RBP11.28□□□□□ -0.6
SPTB-208ENST00000556626 CRKLP46109 303 aaKnown RBP11.28□□□□□ -0.6
SPTB-208ENST00000556626 RGS4P49798 205 aa11.28□□□□□ -0.6
SPTB-208ENST00000556626 FXR1P51114 621 aaKnown RBP eCLIP11.28□□□□□ -0.64e-6■■■□□ 17.7
SPTB-208ENST00000556626 C16orf72Q14CZ0 275 aa11.28□□□□□ -0.6
SPTB-208ENST00000556626 PPP2R3CQ969Q6 453 aa11.28□□□□□ -0.6
SPTB-208ENST00000556626 BDH2Q9BUT1 245 aa11.28□□□□□ -0.6
SPTB-208ENST00000556626 MMADHCQ9H3L0 296 aaPredicted RBP11.28□□□□□ -0.6
SPTB-208ENST00000556626 DDX18Q9NVP1 670 aaKnown RBP11.28□□□□□ -0.6
SPTB-208ENST00000556626 COPG2Q9UBF2 871 aa11.28□□□□□ -0.6
SPTB-208ENST00000556626 VPS9D1Q9Y2B5 631 aa11.28□□□□□ -0.6
SPTB-208ENST00000556626 FAM25AB3EWG3 89 aa11.28□□□□□ -0.6
SPTB-208ENST00000556626 FAM25CB3EWG5 89 aa11.28□□□□□ -0.6
SPTB-208ENST00000556626 FAM25GB3EWG6 89 aa11.28□□□□□ -0.6
SPTB-208ENST00000556626 PDIA5Q14554 519 aa11.28□□□□□ -0.6
SPTB-208ENST00000556626 CACHD1Q5VU97 1274 aa11.28□□□□□ -0.6
SPTB-208ENST00000556626 EGFL6Q8IUX8 553 aa11.28□□□□□ -0.6
SPTB-208ENST00000556626 TPCN2Q8NHX9 752 aa11.28□□□□□ -0.6
SPTB-208ENST00000556626 ENKURQ8TC29 256 aa11.28□□□□□ -0.6
SPTB-208ENST00000556626 FAM111AQ96PZ2 611 aa11.28□□□□□ -0.6
SPTB-208ENST00000556626 ZNF341Q9BYN7 854 aa11.28□□□□□ -0.6
SPTB-208ENST00000556626 RABGEF1Q9UJ41 708 aa11.28□□□□□ -0.6
SPTB-208ENST00000556626 CCDC88AQ3V6T2 1871 aa11.28□□□□□ -0.6
SPTB-208ENST00000556626 ADGRL3Q9HAR2 1447 aa11.28□□□□□ -0.6
SPTB-208ENST00000556626 USP17L15C9J2P7 530 aa11.28□□□□□ -0.6
SPTB-208ENST00000556626 USP17L13C9JLJ4 530 aa11.28□□□□□ -0.6
SPTB-208ENST00000556626 USP17L11C9JVI0 530 aa11.28□□□□□ -0.6
SPTB-208ENST00000556626 USP17L18D6R9N7 530 aa11.28□□□□□ -0.6
SPTB-208ENST00000556626 USP17L22D6RA61 530 aa11.28□□□□□ -0.6
SPTB-208ENST00000556626 USP17L17D6RBQ6 530 aa11.28□□□□□ -0.6
SPTB-208ENST00000556626 USP17L19D6RCP7 530 aa11.28□□□□□ -0.6
SPTB-208ENST00000556626 USP17L20D6RJB6 530 aa11.28□□□□□ -0.6
SPTB-208ENST00000556626 KRT20P35900 424 aa11.28□□□□□ -0.6
SPTB-208ENST00000556626 USP17L24Q0WX57 530 aa11.28□□□□□ -0.6
SPTB-208ENST00000556626 GRM4Q14833 912 aa11.28□□□□□ -0.6
SPTB-208ENST00000556626 DCAF4L1Q3SXM0 396 aa11.28□□□□□ -0.6
SPTB-208ENST00000556626 SYTL3Q4VX76 610 aa11.28□□□□□ -0.6
SPTB-208ENST00000556626 PCNX4Q63HM2 1172 aa11.28□□□□□ -0.6
SPTB-208ENST00000556626 USP17L6PQ6QN14 398 aa11.28□□□□□ -0.6
SPTB-208ENST00000556626 RNF17Q9BXT8 1623 aaKnown RBP11.28□□□□□ -0.6
SPTB-208ENST00000556626 NPEPPSP55786 919 aa11.28□□□□□ -0.6
SPTB-208ENST00000556626 FAM45AQ8TCE6 357 aa11.28□□□□□ -0.6
SPTB-208ENST00000556626 MED15Q96RN5 788 aa11.28□□□□□ -0.6
SPTB-208ENST00000556626 HDHD2Q9H0R4 259 aa11.28□□□□□ -0.6
SPTB-208ENST00000556626 PLEKHA5Q9HAU0 1116 aa11.28□□□□□ -0.6
SPTB-208ENST00000556626 ZNF302Q9NR11 478 aa11.28□□□□□ -0.6
SPTB-208ENST00000556626 CYP51A1Q16850 503 aa11.27□□□□□ -0.6
SPTB-208ENST00000556626 AHI1Q8N157 1196 aa11.27□□□□□ -0.6
SPTB-208ENST00000556626 APBB2Q92870 758 aa11.27□□□□□ -0.6
SPTB-208ENST00000556626 RMND5BQ96G75 393 aaPredicted RBP11.27□□□□□ -0.6
SPTB-208ENST00000556626 SERHL2Q9H4I8 314 aa11.27□□□□□ -0.6
SPTB-208ENST00000556626 SERHLQ9NQF3 203 aa11.27□□□□□ -0.6
SPTB-208ENST00000556626 TFDP3Q5H9I0 405 aa11.27□□□□□ -0.6
SPTB-208ENST00000556626 AGAP9Q5VTM2 703 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms