RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 ATRIPQ8WXE1 791 aa7.11□□□□□ -1.27
SLIRP-203ENST00000554074 RSPRY1Q96DX4 576 aa7.11□□□□□ -1.27
SLIRP-203ENST00000554074 SAAL1Q96ER3 474 aa7.11□□□□□ -1.27
SLIRP-203ENST00000554074 FUBP3Q96I24 572 aaKnown RBP eCLIP7.11□□□□□ -1.27
SLIRP-203ENST00000554074 CEP295NLQ96MC4 621 aa7.11□□□□□ -1.27
SLIRP-203ENST00000554074 GCNAQ96QF7 691 aa7.11□□□□□ -1.27
SLIRP-203ENST00000554074 PKMYT1Q99640 499 aa7.11□□□□□ -1.27
SLIRP-203ENST00000554074 SEPT5Q99719 369 aaPredicted RBP7.11□□□□□ -1.27
SLIRP-203ENST00000554074 LPIN3Q9BQK8 851 aa7.11□□□□□ -1.27
SLIRP-203ENST00000554074 CBWD1Q9BRT8 395 aa7.11□□□□□ -1.27
SLIRP-203ENST00000554074 FGFBP2Q9BYJ0 223 aa7.11□□□□□ -1.27
SLIRP-203ENST00000554074 TRIM9Q9C026 710 aa7.11□□□□□ -1.27
SLIRP-203ENST00000554074 EPC1Q9H2F5 836 aa7.11□□□□□ -1.27
SLIRP-203ENST00000554074 ATXN3LQ9H3M9 355 aa7.11□□□□□ -1.27
SLIRP-203ENST00000554074 KIAA1586Q9HCI6 787 aa7.11□□□□□ -1.27
SLIRP-203ENST00000554074 TBC1D7Q9P0N9 293 aa7.11□□□□□ -1.27
SLIRP-203ENST00000554074 AGAP1Q9UPQ3 857 aa7.11□□□□□ -1.27
SLIRP-203ENST00000554074 PCDHB5Q9Y5E4 795 aa7.11□□□□□ -1.27
SLIRP-203ENST00000554074 NUP205Q92621 2012 aa7.11□□□□□ -1.27
SLIRP-203ENST00000554074 ZNF233A6NK53 670 aa7.1□□□□□ -1.27
SLIRP-203ENST00000554074 DPYSL4O14531 572 aa7.1□□□□□ -1.27
SLIRP-203ENST00000554074 SOAT2O75908 522 aa7.1□□□□□ -1.27
SLIRP-203ENST00000554074 NOL4O94818 638 aa7.1□□□□□ -1.27
SLIRP-203ENST00000554074 PRPF6O94906 941 aaKnown RBP7.1□□□□□ -1.27
SLIRP-203ENST00000554074 PRAMEF12O95522 483 aa7.1□□□□□ -1.27
SLIRP-203ENST00000554074 F11P03951 625 aa7.1□□□□□ -1.27
SLIRP-203ENST00000554074 FAM163BP0C2L3 166 aa7.1□□□□□ -1.27
SLIRP-203ENST00000554074 TMEM191BP0C7N4 346 aa7.1□□□□□ -1.27
SLIRP-203ENST00000554074 HMGA1P17096 107 aaKnown RBP7.1□□□□□ -1.27
SLIRP-203ENST00000554074 CCNE1P24864 410 aa7.1□□□□□ -1.27
SLIRP-203ENST00000554074 PCSK1P29120 753 aa7.1□□□□□ -1.27
SLIRP-203ENST00000554074 CTHP32929 405 aa7.1□□□□□ -1.27
SLIRP-203ENST00000554074 ANP32AP39687 249 aaKnown RBP7.1□□□□□ -1.27
SLIRP-203ENST00000554074 NLRP12P59046 1061 aa7.1□□□□□ -1.27
SLIRP-203ENST00000554074 RPL10AP62906 217 aaKnown RBP7.1□□□□□ -1.27
SLIRP-203ENST00000554074 CSTF1Q05048 431 aaKnown RBP7.1□□□□□ -1.27
SLIRP-203ENST00000554074 EHHADHQ08426 723 aa7.1□□□□□ -1.27
SLIRP-203ENST00000554074 MYO1EQ12965 1108 aa7.1□□□□□ -1.27
SLIRP-203ENST00000554074 ZNF268Q14587 947 aaPredicted RBP7.1□□□□□ -1.27
SLIRP-203ENST00000554074 TAF12Q16514 161 aa7.1□□□□□ -1.27
SLIRP-203ENST00000554074 CFAP221Q4G0U5 840 aa7.1□□□□□ -1.27
SLIRP-203ENST00000554074 DGKKQ5KSL6 1271 aa7.1□□□□□ -1.27
SLIRP-203ENST00000554074 STXBP5Q5T5C0 1151 aa7.1□□□□□ -1.27
SLIRP-203ENST00000554074 EPM2AIP1Q7L775 607 aaPredicted RBP7.1□□□□□ -1.27
SLIRP-203ENST00000554074 TMEM150AQ86TG1 271 aa7.1□□□□□ -1.27
SLIRP-203ENST00000554074 CMTM8Q8IZV2 173 aa7.1□□□□□ -1.27
SLIRP-203ENST00000554074 SPEM1Q8N4L4 309 aa7.1□□□□□ -1.27
SLIRP-203ENST00000554074 CSGALNACT2Q8N6G5 542 aa7.1□□□□□ -1.27
SLIRP-203ENST00000554074 GPR161Q8N6U8 529 aaKnown RBP7.1□□□□□ -1.27
SLIRP-203ENST00000554074 PDILTQ8N807 584 aa7.1□□□□□ -1.27
SLIRP-203ENST00000554074 ZSWIM2Q8NEG5 633 aa7.1□□□□□ -1.27
SLIRP-203ENST00000554074 ZNF507Q8TCN5 953 aa7.1□□□□□ -1.27
SLIRP-203ENST00000554074 BPIFB1Q8TDL5 484 aa7.1□□□□□ -1.27
SLIRP-203ENST00000554074 TRMT2BQ96GJ1 504 aaKnown RBP7.1□□□□□ -1.27
SLIRP-203ENST00000554074 ANKRD36BP1Q96IX9 119 aa7.1□□□□□ -1.27
SLIRP-203ENST00000554074 MYRFLQ96LU7 910 aa7.1□□□□□ -1.27
SLIRP-203ENST00000554074 LRRC3BQ96PB8 259 aa7.1□□□□□ -1.27
SLIRP-203ENST00000554074 C7orf25Q9BPX7 421 aa7.1□□□□□ -1.27
SLIRP-203ENST00000554074 SLC46A2Q9BY10 475 aa7.1□□□□□ -1.27
SLIRP-203ENST00000554074 PANK2Q9BZ23 570 aa7.1□□□□□ -1.27
SLIRP-203ENST00000554074 KIF9Q9HAQ2 790 aa7.1□□□□□ -1.27
SLIRP-203ENST00000554074 LMAN1LQ9HAT1 526 aa7.1□□□□□ -1.27
SLIRP-203ENST00000554074 PDE11AQ9HCR9 933 aa7.1□□□□□ -1.27
SLIRP-203ENST00000554074 TMLHEQ9NVH6 421 aa7.1□□□□□ -1.27
SLIRP-203ENST00000554074 INTS13Q9NVM9 706 aa7.1□□□□□ -1.27
SLIRP-203ENST00000554074 THG1LQ9NWX6 298 aaKnown RBP7.1□□□□□ -1.27
SLIRP-203ENST00000554074 DDX43Q9NXZ2 648 aaKnown RBP7.1□□□□□ -1.27
SLIRP-203ENST00000554074 ABI2Q9NYB9 513 aaPredicted RBP7.1□□□□□ -1.27
SLIRP-203ENST00000554074 CGNQ9P2M7 1197 aaKnown RBP7.1□□□□□ -1.27
SLIRP-203ENST00000554074 UXTQ9UBK9 157 aaPredicted RBP7.1□□□□□ -1.27
SLIRP-203ENST00000554074 SIX4Q9UIU6 781 aa7.1□□□□□ -1.27
SLIRP-203ENST00000554074 NDRG2Q9UN36 371 aaKnown RBP7.1□□□□□ -1.27
SLIRP-203ENST00000554074 L1RE1Q9UN81 338 aa7.1□□□□□ -1.27
SLIRP-203ENST00000554074 SDK1Q7Z5N4 2213 aa7.1□□□□□ -1.27
SLIRP-203ENST00000554074 PLXND1Q9Y4D7 1925 aa7.09□□□□□ -1.27
SLIRP-203ENST00000554074 PVALEFA0A1B0GWK0 134 aa7.09□□□□□ -1.27
SLIRP-203ENST00000554074 GOLGA8IPA6NC78 632 aa7.09□□□□□ -1.27
SLIRP-203ENST00000554074 GOLGA8JA6NMD2 632 aa7.09□□□□□ -1.27
SLIRP-203ENST00000554074 SPECC1L-ADORA2AF8WAN1 911 aa7.09□□□□□ -1.27
SLIRP-203ENST00000554074 PRPF40AO75400 957 aaKnown RBP7.09□□□□□ -1.27
SLIRP-203ENST00000554074 TNNC2P02585 160 aa7.09□□□□□ -1.27
SLIRP-203ENST00000554074 PFKLP17858 780 aa7.09□□□□□ -1.27
SLIRP-203ENST00000554074 HOXA6P31267 233 aa7.09□□□□□ -1.27
SLIRP-203ENST00000554074 CNR2P34972 360 aa7.09□□□□□ -1.27
SLIRP-203ENST00000554074 HOXD13P35453 343 aa7.09□□□□□ -1.27
SLIRP-203ENST00000554074 AVPR1AP37288 418 aa7.09□□□□□ -1.27
SLIRP-203ENST00000554074 MAGEA11P43364 429 aa7.09□□□□□ -1.27
SLIRP-203ENST00000554074 ID4P47928 161 aa7.09□□□□□ -1.27
SLIRP-203ENST00000554074 CXCL12P48061 93 aa7.09□□□□□ -1.27
SLIRP-203ENST00000554074 KPNA1P52294 538 aaPredicted RBP7.09□□□□□ -1.27
SLIRP-203ENST00000554074 ASIC1P78348 528 aa7.09□□□□□ -1.27
SLIRP-203ENST00000554074 CYP4F8P98187 520 aa7.09□□□□□ -1.27
SLIRP-203ENST00000554074 BFSP1Q12934 665 aa7.09□□□□□ -1.27
SLIRP-203ENST00000554074 MAPRE1Q15691 268 aaKnown RBP7.09□□□□□ -1.27
SLIRP-203ENST00000554074 DUOXA2Q1HG44 320 aa7.09□□□□□ -1.27
SLIRP-203ENST00000554074 BMT2Q1RMZ1 405 aa7.09□□□□□ -1.27
SLIRP-203ENST00000554074 SOWAHAQ2M3V2 549 aa7.09□□□□□ -1.27
SLIRP-203ENST00000554074 ITPRIPL2Q3MIP1 535 aa7.09□□□□□ -1.27
SLIRP-203ENST00000554074 FAM26FQ5R3K3 315 aa7.09□□□□□ -1.27
SLIRP-203ENST00000554074 FAM171BQ6P995 826 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms