RNA–Protein interactions for RNA: ENST00000553970.1

SEC23A-206, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4 BASIC

Gene SEC23A, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-206ENST00000553970 PARD6AQ9NPB6 346 aa18.53■□□□□ 0.56
SEC23A-206ENST00000553970 GKN1Q9NS71 199 aa18.53■□□□□ 0.56
SEC23A-206ENST00000553970 VPS37CA5D8V6 355 aaPredicted RBP18.52■□□□□ 0.56
SEC23A-206ENST00000553970 HRO43593 1189 aa18.52■□□□□ 0.56
SEC23A-206ENST00000553970 PRPF40AO75400 957 aaKnown RBP18.52■□□□□ 0.56
SEC23A-206ENST00000553970 GCNT3O95395 438 aa18.52■□□□□ 0.56
SEC23A-206ENST00000553970 PCSK1P29120 753 aa18.52■□□□□ 0.56
SEC23A-206ENST00000553970 LHX1P48742 406 aa18.52■□□□□ 0.56
SEC23A-206ENST00000553970 PDE6CP51160 858 aa18.52■□□□□ 0.56
SEC23A-206ENST00000553970 GRIN1Q05586 938 aa18.52■□□□□ 0.56
SEC23A-206ENST00000553970 TNK2Q07912 1038 aa18.52■□□□□ 0.56
SEC23A-206ENST00000553970 FBXO43Q4G163 708 aa18.52■□□□□ 0.56
SEC23A-206ENST00000553970 HEATR6Q6AI08 1181 aaKnown RBP18.52■□□□□ 0.56
SEC23A-206ENST00000553970 CRELD2Q6UXH1 353 aaPredicted RBP18.52■□□□□ 0.56
SEC23A-206ENST00000553970 PRR23CQ6ZRP0 262 aa18.52■□□□□ 0.56
SEC23A-206ENST00000553970 STXBP4Q6ZWJ1 553 aa18.52■□□□□ 0.56
SEC23A-206ENST00000553970 MON1AQ86VX9 555 aa18.52■□□□□ 0.56
SEC23A-206ENST00000553970 EFCAB13Q8IY85 973 aa18.52■□□□□ 0.56
SEC23A-206ENST00000553970 MAB21L3Q8N8X9 362 aa18.52■□□□□ 0.56
SEC23A-206ENST00000553970 FSIP1Q8NA03 581 aa18.52■□□□□ 0.56
SEC23A-206ENST00000553970 TTC8Q8TAM2 541 aa18.52■□□□□ 0.56
SEC23A-206ENST00000553970 TRMT2BQ96GJ1 504 aaKnown RBP18.52■□□□□ 0.56
SEC23A-206ENST00000553970 EPSTI1Q96J88 318 aa18.52■□□□□ 0.56
SEC23A-206ENST00000553970 FAM83CQ9BQN1 747 aa18.52■□□□□ 0.56
SEC23A-206ENST00000553970 FAM213AQ9BRX8 229 aa18.52■□□□□ 0.56
SEC23A-206ENST00000553970 TMEM206Q9H813 350 aa18.52■□□□□ 0.56
SEC23A-206ENST00000553970 RBAKQ9NYW8 714 aaPredicted RBP18.52■□□□□ 0.56
SEC23A-206ENST00000553970 SLC8A2Q9UPR5 921 aa18.52■□□□□ 0.56
SEC23A-206ENST00000553970 SRPRBQ9Y5M8 271 aaKnown RBP18.52■□□□□ 0.56
SEC23A-206ENST00000553970 TISP43B9A030 160 aa18.51■□□□□ 0.55
SEC23A-206ENST00000553970 TRDMT1O14717 391 aaKnown RBP18.51■□□□□ 0.55
SEC23A-206ENST00000553970 AKAP3O75969 853 aa18.51■□□□□ 0.55
SEC23A-206ENST00000553970 F11P03951 625 aa18.51■□□□□ 0.55
SEC23A-206ENST00000553970 CENPBP07199 599 aaPredicted RBP18.51■□□□□ 0.55
SEC23A-206ENST00000553970 DRD1P21728 446 aa18.51■□□□□ 0.55
SEC23A-206ENST00000553970 ADSSP30520 456 aa18.51■□□□□ 0.55
SEC23A-206ENST00000553970 POLR2BP30876 1174 aaKnown RBP18.51■□□□□ 0.55
SEC23A-206ENST00000553970 MYO1EQ12965 1108 aa18.51■□□□□ 0.55
SEC23A-206ENST00000553970 TMEM196Q5HYL7 178 aa18.51■□□□□ 0.55
SEC23A-206ENST00000553970 LRRTM3Q86VH5 581 aa18.51■□□□□ 0.55
SEC23A-206ENST00000553970 GPIHBP1Q8IV16 184 aa18.51■□□□□ 0.55
SEC23A-206ENST00000553970 PDCL2Q8N4E4 241 aa18.51■□□□□ 0.55
SEC23A-206ENST00000553970 CPA6Q8N4T0 437 aa18.51■□□□□ 0.55
SEC23A-206ENST00000553970 CAMKK1Q8N5S9 505 aa18.51■□□□□ 0.55
SEC23A-206ENST00000553970 FUBP3Q96I24 572 aaKnown RBP eCLIP18.51■□□□□ 0.55
SEC23A-206ENST00000553970 STRA6Q9BX79 667 aa18.51■□□□□ 0.55
SEC23A-206ENST00000553970 GDAP2Q9NXN4 497 aa18.51■□□□□ 0.55
SEC23A-206ENST00000553970 DDX43Q9NXZ2 648 aaKnown RBP18.51■□□□□ 0.55
SEC23A-206ENST00000553970 AGAP1Q9UPQ3 857 aa18.51■□□□□ 0.55
SEC23A-206ENST00000553970 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.51■□□□□ 0.55
SEC23A-206ENST00000553970 SPTBN2O15020 2390 aa18.5■□□□□ 0.55
SEC23A-206ENST00000553970 RALGAPA1Q6GYQ0 2036 aa18.5■□□□□ 0.55
SEC23A-206ENST00000553970 KIF26AQ9ULI4 1882 aaPredicted RBP18.5■□□□□ 0.55
SEC23A-206ENST00000553970 ZNF638Q14966 1978 aaKnown RBP18.5■□□□□ 0.55
SEC23A-206ENST00000553970 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.5■□□□□ 0.55
SEC23A-206ENST00000553970 CD2BP2O95400 341 aaKnown RBP18.5■□□□□ 0.55
SEC23A-206ENST00000553970 ITGB3P05106 788 aa18.5■□□□□ 0.55
SEC23A-206ENST00000553970 TMEM191BP0C7N4 346 aa18.5■□□□□ 0.55
SEC23A-206ENST00000553970 HMGA1P17096 107 aaKnown RBP18.5■□□□□ 0.55
SEC23A-206ENST00000553970 RBP5P82980 135 aa18.5■□□□□ 0.55
SEC23A-206ENST00000553970 SURF1Q15526 300 aa18.5■□□□□ 0.55
SEC23A-206ENST00000553970 CFAP221Q4G0U5 840 aa18.5■□□□□ 0.55
SEC23A-206ENST00000553970 INTS6LQ5JSJ4 861 aaKnown RBP18.5■□□□□ 0.55
SEC23A-206ENST00000553970 CACNA2D4Q7Z3S7 1137 aa18.5■□□□□ 0.55
SEC23A-206ENST00000553970 TOP6BLQ8N6T0 577 aa18.5■□□□□ 0.55
SEC23A-206ENST00000553970 GAB3Q8WWW8 586 aa18.5■□□□□ 0.55
SEC23A-206ENST00000553970 USP13Q92995 863 aaPredicted RBP18.5■□□□□ 0.55
SEC23A-206ENST00000553970 CEP295NLQ96MC4 621 aa18.5■□□□□ 0.55
SEC23A-206ENST00000553970 PI4K2AQ9BTU6 479 aa18.5■□□□□ 0.55
SEC23A-206ENST00000553970 LRRC27Q9C0I9 530 aa18.5■□□□□ 0.55
SEC23A-206ENST00000553970 MAGED2Q9UNF1 606 aaPredicted RBP18.5■□□□□ 0.55
SEC23A-206ENST00000553970 MORC2Q9Y6X9 1032 aaPredicted RBP18.5■□□□□ 0.55
SEC23A-206ENST00000553970 TPRP12270 2363 aaKnown RBP18.5■□□□□ 0.55
SEC23A-206ENST00000553970 DENND4CQ5VZ89 1909 aa18.49■□□□□ 0.55
SEC23A-206ENST00000553970 DCDC2BA2VCK2 349 aa18.49■□□□□ 0.55
SEC23A-206ENST00000553970 TULP1O00294 542 aaPredicted RBP18.49■□□□□ 0.55
SEC23A-206ENST00000553970 EXTL3O43909 919 aa18.49■□□□□ 0.55
SEC23A-206ENST00000553970 RPP40O75818 363 aaKnown RBP18.49■□□□□ 0.55
SEC23A-206ENST00000553970 USP17L7P0C7H9 530 aa18.49■□□□□ 0.55
SEC23A-206ENST00000553970 STAT6P42226 847 aa18.49■□□□□ 0.55
SEC23A-206ENST00000553970 FAM160A1Q05DH4 1040 aa18.49■□□□□ 0.55
SEC23A-206ENST00000553970 NR1H3Q13133 447 aa18.49■□□□□ 0.55
SEC23A-206ENST00000553970 MAPRE1Q15691 268 aaKnown RBP18.49■□□□□ 0.55
SEC23A-206ENST00000553970 C4orf50Q6ZRC1 276 aa18.49■□□□□ 0.55
SEC23A-206ENST00000553970 DPH6Q7L8W6 267 aa18.49■□□□□ 0.55
SEC23A-206ENST00000553970 SPATA2LQ8IUW3 424 aaPredicted RBP18.49■□□□□ 0.55
SEC23A-206ENST00000553970 FAM160A2Q8N612 972 aaPredicted RBP18.49■□□□□ 0.55
SEC23A-206ENST00000553970 CSGALNACT2Q8N6G5 542 aa18.49■□□□□ 0.55
SEC23A-206ENST00000553970 C1orf127Q8N9H9 656 aa18.49■□□□□ 0.55
SEC23A-206ENST00000553970 C12orf50Q8NA57 414 aaPredicted RBP18.49■□□□□ 0.55
SEC23A-206ENST00000553970 ATP2A3Q93084 1043 aa18.49■□□□□ 0.55
SEC23A-206ENST00000553970 ANKRD36BP1Q96IX9 119 aa18.49■□□□□ 0.55
SEC23A-206ENST00000553970 MYRFLQ96LU7 910 aa18.49■□□□□ 0.55
SEC23A-206ENST00000553970 EHD2Q9NZN4 543 aa18.49■□□□□ 0.55
SEC23A-206ENST00000553970 FBXO2Q9UK22 296 aaPredicted RBP18.49■□□□□ 0.55
SEC23A-206ENST00000553970 L1RE1Q9UN81 338 aa18.49■□□□□ 0.55
SEC23A-206ENST00000553970 TRAV19A0A0A6YYK7 116 aa18.48■□□□□ 0.55
SEC23A-206ENST00000553970 NOL4O94818 638 aa18.48■□□□□ 0.55
SEC23A-206ENST00000553970 KRT19P08727 400 aa18.48■□□□□ 0.55
SEC23A-206ENST00000553970 CCDC192P0DO97 292 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms