RNA–Protein interactions for RNA: ENST00000553904.1

FOXN3-205, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 337 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-205ENST00000553904 VSTM1Q6UX27 236 aa6.99□□□□□ -1.29
FOXN3-205ENST00000553904 FOXD4L3Q6VB84 417 aaPredicted RBP6.99□□□□□ -1.29
FOXN3-205ENST00000553904 GAREM2Q75VX8 874 aa6.99□□□□□ -1.29
FOXN3-205ENST00000553904 ASCL5Q7RTU5 278 aa6.99□□□□□ -1.29
FOXN3-205ENST00000553904 TRAPPC11Q7Z392 1133 aa6.99□□□□□ -1.29
FOXN3-205ENST00000553904 LRRTM3Q86VH5 581 aa6.99□□□□□ -1.29
FOXN3-205ENST00000553904 TMC8Q8IU68 726 aa6.99□□□□□ -1.29
FOXN3-205ENST00000553904 ADGRF2Q8IZF7 708 aa6.99□□□□□ -1.29
FOXN3-205ENST00000553904 SYNPOQ8N3V7 929 aa6.99□□□□□ -1.29
FOXN3-205ENST00000553904 PDCL2Q8N4E4 241 aa6.99□□□□□ -1.29
FOXN3-205ENST00000553904 CCDC26Q8TAB7 109 aa6.99□□□□□ -1.29
FOXN3-205ENST00000553904 GIPC2Q8TF65 315 aa6.99□□□□□ -1.29
FOXN3-205ENST00000553904 FOXD4L4Q8WXT5 416 aaPredicted RBP6.99□□□□□ -1.29
FOXN3-205ENST00000553904 RUBCNQ92622 972 aa6.99□□□□□ -1.29
FOXN3-205ENST00000553904 TMEM209Q96SK2 561 aa6.99□□□□□ -1.29
FOXN3-205ENST00000553904 HINFPQ9BQA5 517 aa6.99□□□□□ -1.29
FOXN3-205ENST00000553904 PI4K2AQ9BTU6 479 aa6.99□□□□□ -1.29
FOXN3-205ENST00000553904 MTMR12Q9C0I1 747 aa6.99□□□□□ -1.29
FOXN3-205ENST00000553904 SCAND2PQ9GZW5 306 aaPredicted RBP6.99□□□□□ -1.29
FOXN3-205ENST00000553904 DNAJC25Q9H1X3 360 aa6.99□□□□□ -1.29
FOXN3-205ENST00000553904 CRISPLD1Q9H336 500 aa6.99□□□□□ -1.29
FOXN3-205ENST00000553904 SNX25Q9H3E2 840 aa6.99□□□□□ -1.29
FOXN3-205ENST00000553904 EXOC1Q9NV70 894 aa6.99□□□□□ -1.29
FOXN3-205ENST00000553904 ZSCAN32Q9NX65 697 aa6.99□□□□□ -1.29
FOXN3-205ENST00000553904 GTF3C4Q9UKN8 822 aa6.99□□□□□ -1.29
FOXN3-205ENST00000553904 CDH9Q9ULB4 789 aa6.99□□□□□ -1.29
FOXN3-205ENST00000553904 RAB23Q9ULC3 237 aa6.99□□□□□ -1.29
FOXN3-205ENST00000553904 NDRG2Q9UN36 371 aaKnown RBP6.99□□□□□ -1.29
FOXN3-205ENST00000553904 MAGED2Q9UNF1 606 aaPredicted RBP6.99□□□□□ -1.29
FOXN3-205ENST00000553904 PIAS3Q9Y6X2 628 aa6.99□□□□□ -1.29
FOXN3-205ENST00000553904 MTCL1Q9Y4B5 1905 aaKnown RBP6.99□□□□□ -1.29
FOXN3-205ENST00000553904 PLXNA3P51805 1871 aa6.98□□□□□ -1.29
FOXN3-205ENST00000553904 MYBPHLA2RUH7 354 aa6.98□□□□□ -1.29
FOXN3-205ENST00000553904 TRIM66O15016 1216 aa6.98□□□□□ -1.29
FOXN3-205ENST00000553904 CLIC2O15247 247 aa6.98□□□□□ -1.29
FOXN3-205ENST00000553904 TACC1O75410 805 aa6.98□□□□□ -1.29
FOXN3-205ENST00000553904 VNN2O95498 520 aa6.98□□□□□ -1.29
FOXN3-205ENST00000553904 F11P03951 625 aa6.98□□□□□ -1.29
FOXN3-205ENST00000553904 USP17L7P0C7H9 530 aa6.98□□□□□ -1.29
FOXN3-205ENST00000553904 P4HA1P13674 534 aa6.98□□□□□ -1.29
FOXN3-205ENST00000553904 CMA1P23946 247 aa6.98□□□□□ -1.29
FOXN3-205ENST00000553904 CCNE1P24864 410 aa6.98□□□□□ -1.29
FOXN3-205ENST00000553904 CNR2P34972 360 aa6.98□□□□□ -1.29
FOXN3-205ENST00000553904 GRIK1P39086 918 aa6.98□□□□□ -1.29
FOXN3-205ENST00000553904 MAGEA11P43364 429 aa6.98□□□□□ -1.29
FOXN3-205ENST00000553904 NLRP12P59046 1061 aa6.98□□□□□ -1.29
FOXN3-205ENST00000553904 TNNC1P63316 161 aa6.98□□□□□ -1.29
FOXN3-205ENST00000553904 DNM1Q05193 864 aaKnown RBP6.98□□□□□ -1.29
FOXN3-205ENST00000553904 GRSF1Q12849 480 aaKnown RBP eCLIP6.98□□□□□ -1.29
FOXN3-205ENST00000553904 PSMD6Q15008 389 aa6.98□□□□□ -1.29
FOXN3-205ENST00000553904 SOWAHAQ2M3V2 549 aa6.98□□□□□ -1.29
FOXN3-205ENST00000553904 ITPRIPL2Q3MIP1 535 aa6.98□□□□□ -1.29
FOXN3-205ENST00000553904 WDR72Q3MJ13 1102 aa6.98□□□□□ -1.29
FOXN3-205ENST00000553904 FAM171BQ6P995 826 aa6.98□□□□□ -1.29
FOXN3-205ENST00000553904 EPM2AIP1Q7L775 607 aaPredicted RBP6.98□□□□□ -1.29
FOXN3-205ENST00000553904 MON1AQ86VX9 555 aa6.98□□□□□ -1.29
FOXN3-205ENST00000553904 CBWD2Q8IUF1 395 aa6.98□□□□□ -1.29
FOXN3-205ENST00000553904 SCN4BQ8IWT1 228 aa6.98□□□□□ -1.29
FOXN3-205ENST00000553904 NELFCDQ8IXH7 590 aa6.98□□□□□ -1.29
FOXN3-205ENST00000553904 C12orf56Q8IXR9 622 aa6.98□□□□□ -1.29
FOXN3-205ENST00000553904 SPEM1Q8N4L4 309 aa6.98□□□□□ -1.29
FOXN3-205ENST00000553904 MAB21L3Q8N8X9 362 aa6.98□□□□□ -1.29
FOXN3-205ENST00000553904 OR6B3Q8NGW1 331 aa6.98□□□□□ -1.29
FOXN3-205ENST00000553904 SYAP1Q96A49 352 aaPredicted RBP6.98□□□□□ -1.29
FOXN3-205ENST00000553904 CCDC127Q96BQ5 260 aa6.98□□□□□ -1.29
FOXN3-205ENST00000553904 TRMT2BQ96GJ1 504 aaKnown RBP6.98□□□□□ -1.29
FOXN3-205ENST00000553904 SPATA17Q96L03 361 aa6.98□□□□□ -1.29
FOXN3-205ENST00000553904 SPATA32Q96LK8 384 aa6.98□□□□□ -1.29
FOXN3-205ENST00000553904 MYRFLQ96LU7 910 aa6.98□□□□□ -1.29
FOXN3-205ENST00000553904 LPIN3Q9BQK8 851 aa6.98□□□□□ -1.29
FOXN3-205ENST00000553904 SLC46A2Q9BY10 475 aa6.98□□□□□ -1.29
FOXN3-205ENST00000553904 IKZF4Q9H2S9 585 aa6.98□□□□□ -1.29
FOXN3-205ENST00000553904 CHRDQ9H2X0 955 aa6.98□□□□□ -1.29
FOXN3-205ENST00000553904 SLC39A2Q9NP94 309 aa6.98□□□□□ -1.29
FOXN3-205ENST00000553904 AGPAT3Q9NRZ7 376 aa6.98□□□□□ -1.29
FOXN3-205ENST00000553904 GKN1Q9NS71 199 aa6.98□□□□□ -1.29
FOXN3-205ENST00000553904 TDP1Q9NUW8 608 aa6.98□□□□□ -1.29
FOXN3-205ENST00000553904 L1RE1Q9UN81 338 aa6.98□□□□□ -1.29
FOXN3-205ENST00000553904 FRMD4BQ9Y2L6 1034 aa6.98□□□□□ -1.29
FOXN3-205ENST00000553904 MTF2Q9Y483 593 aaPredicted RBP6.98□□□□□ -1.29
FOXN3-205ENST00000553904 MYO10Q9HD67 2058 aa6.97□□□□□ -1.29
FOXN3-205ENST00000553904 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.97□□□□□ -1.29
FOXN3-205ENST00000553904 TRAV19A0A0A6YYK7 116 aa6.97□□□□□ -1.29
FOXN3-205ENST00000553904 GOLGA6L4A6NEF3 574 aa6.97□□□□□ -1.29
FOXN3-205ENST00000553904 SLC38A8A6NNN8 435 aa6.97□□□□□ -1.29
FOXN3-205ENST00000553904 SPECC1L-ADORA2AF8WAN1 911 aa6.97□□□□□ -1.29
FOXN3-205ENST00000553904 PDXKO00764 312 aa6.97□□□□□ -1.29
FOXN3-205ENST00000553904 TGFB1I1O43294 461 aa6.97□□□□□ -1.29
FOXN3-205ENST00000553904 CALUO43852 315 aaPredicted RBP6.97□□□□□ -1.29
FOXN3-205ENST00000553904 LRRN2O75325 713 aa6.97□□□□□ -1.29
FOXN3-205ENST00000553904 SOAT2O75908 522 aa6.97□□□□□ -1.29
FOXN3-205ENST00000553904 CLSTN1O94985 981 aa6.97□□□□□ -1.29
FOXN3-205ENST00000553904 STAU1O95793 577 aaKnown RBP6.97□□□□□ -1.29
FOXN3-205ENST00000553904 CST3P01034 146 aaPredicted RBP6.97□□□□□ -1.29
FOXN3-205ENST00000553904 RPN1P04843 607 aaKnown RBP6.97□□□□□ -1.29
FOXN3-205ENST00000553904 PDGFRBP09619 1106 aa6.97□□□□□ -1.29
FOXN3-205ENST00000553904 CHRNB1P11230 501 aa6.97□□□□□ -1.29
FOXN3-205ENST00000553904 ATF6P18850 670 aa6.97□□□□□ -1.29
FOXN3-205ENST00000553904 HDCP19113 662 aa6.97□□□□□ -1.29
FOXN3-205ENST00000553904 WARSP23381 471 aaKnown RBP6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms