RNA–Protein interactions for RNA: ENST00000549472.1

ERBB3-210, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 5

Gene ERBB3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-210ENST00000549472 PRDM5Q9NQX1 630 aaPredicted RBP12.59□□□□□ -0.39
ERBB3-210ENST00000549472 RNF216Q9NWF9 866 aaPredicted RBP12.59□□□□□ -0.39
ERBB3-210ENST00000549472 TANC1Q9C0D5 1861 aa12.59□□□□□ -0.39
ERBB3-210ENST00000549472 TARSL2A2RTX5 802 aaKnown RBP12.58□□□□□ -0.4
ERBB3-210ENST00000549472 CCDC85CA6NKD9 419 aa12.58□□□□□ -0.4
ERBB3-210ENST00000549472 C9IYK1 514 aa12.58□□□□□ -0.4
ERBB3-210ENST00000549472 M0QYV0 167 aa12.58□□□□□ -0.4
ERBB3-210ENST00000549472 SPOPO43791 374 aa12.58□□□□□ -0.4
ERBB3-210ENST00000549472 PROSCO94903 275 aa12.58□□□□□ -0.4
ERBB3-210ENST00000549472 H2AFXP16104 143 aaPredicted RBP12.58□□□□□ -0.4
ERBB3-210ENST00000549472 SSTR3P32745 418 aaPredicted RBP12.58□□□□□ -0.4
ERBB3-210ENST00000549472 PEX5P50542 639 aa12.58□□□□□ -0.4
ERBB3-210ENST00000549472 ZNF268Q14587 947 aaPredicted RBP12.58□□□□□ -0.4
ERBB3-210ENST00000549472 MBTPS1Q14703 1052 aa12.58□□□□□ -0.4
ERBB3-210ENST00000549472 PTPN20Q4JDL3 420 aa12.58□□□□□ -0.4
ERBB3-210ENST00000549472 PPP1R15BQ5SWA1 713 aa12.58□□□□□ -0.4
ERBB3-210ENST00000549472 CCDC70Q6NSX1 233 aa12.58□□□□□ -0.4
ERBB3-210ENST00000549472 SLC24A5Q71RS6 500 aa12.58□□□□□ -0.4
ERBB3-210ENST00000549472 TMEM86AQ8N2M4 240 aa12.58□□□□□ -0.4
ERBB3-210ENST00000549472 NOA1Q8NC60 698 aaKnown RBP12.58□□□□□ -0.4
ERBB3-210ENST00000549472 OR6B3Q8NGW1 331 aa12.58□□□□□ -0.4
ERBB3-210ENST00000549472 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.58□□□□□ -0.4
ERBB3-210ENST00000549472 FEZF2Q8TBJ5 459 aa12.58□□□□□ -0.4
ERBB3-210ENST00000549472 SPATA18Q8TC71 538 aa12.58□□□□□ -0.4
ERBB3-210ENST00000549472 LPPQ93052 612 aa12.58□□□□□ -0.4
ERBB3-210ENST00000549472 DDX27Q96GQ7 796 aaKnown RBP12.58□□□□□ -0.4
ERBB3-210ENST00000549472 TNIP3Q96KP6 325 aa12.58□□□□□ -0.4
ERBB3-210ENST00000549472 UROC1Q96N76 676 aa12.58□□□□□ -0.4
ERBB3-210ENST00000549472 NAP1L3Q99457 506 aaPredicted RBP12.58□□□□□ -0.4
ERBB3-210ENST00000549472 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.58□□□□□ -0.42e-15■□□□□ 11.2
ERBB3-210ENST00000549472 PLVAPQ9BX97 442 aa12.58□□□□□ -0.4
ERBB3-210ENST00000549472 SNX25Q9H3E2 840 aa12.58□□□□□ -0.4
ERBB3-210ENST00000549472 ANKZF1Q9H8Y5 726 aa12.58□□□□□ -0.4
ERBB3-210ENST00000549472 RNF19AQ9NV58 838 aa12.58□□□□□ -0.4
ERBB3-210ENST00000549472 ARGLU1Q9NWB6 273 aaPredicted RBP12.58□□□□□ -0.4
ERBB3-210ENST00000549472 CHORDC1Q9UHD1 332 aaPredicted RBP12.58□□□□□ -0.4
ERBB3-210ENST00000549472 IP6K2Q9UHH9 426 aa12.58□□□□□ -0.4
ERBB3-210ENST00000549472 TMEM59LQ9UK28 342 aa12.58□□□□□ -0.4
ERBB3-210ENST00000549472 TSPAN16Q9UKR8 245 aa12.58□□□□□ -0.4
ERBB3-210ENST00000549472 L1RE1Q9UN81 338 aa12.58□□□□□ -0.4
ERBB3-210ENST00000549472 PCDHA3Q9Y5H8 950 aa12.58□□□□□ -0.4
ERBB3-210ENST00000549472 FAM170AA1A519 330 aa12.57□□□□□ -0.4
ERBB3-210ENST00000549472 TMEM191CA6NGB0 347 aa12.57□□□□□ -0.4
ERBB3-210ENST00000549472 A8MXQ7 604 aa12.57□□□□□ -0.4
ERBB3-210ENST00000549472 CCDC188H7C350 402 aa12.57□□□□□ -0.4
ERBB3-210ENST00000549472 PODXLO00592 558 aa12.57□□□□□ -0.4
ERBB3-210ENST00000549472 GABRDO14764 452 aa12.57□□□□□ -0.4
ERBB3-210ENST00000549472 CEP104O60308 925 aa12.57□□□□□ -0.4
ERBB3-210ENST00000549472 RAG1P15918 1043 aa12.57□□□□□ -0.4
ERBB3-210ENST00000549472 MCM3P25205 808 aa12.57□□□□□ -0.4
ERBB3-210ENST00000549472 GNL1P36915 607 aaPredicted RBP12.57□□□□□ -0.4
ERBB3-210ENST00000549472 AARSP49588 968 aaKnown RBP eCLIP12.57□□□□□ -0.4
ERBB3-210ENST00000549472 MNX1P50219 401 aaPredicted RBP12.57□□□□□ -0.4
ERBB3-210ENST00000549472 SCNN1GP51170 649 aa12.57□□□□□ -0.4
ERBB3-210ENST00000549472 DNA2P51530 1060 aa12.57□□□□□ -0.4
ERBB3-210ENST00000549472 SNX16P57768 344 aa12.57□□□□□ -0.4
ERBB3-210ENST00000549472 FAM189BP81408 668 aa12.57□□□□□ -0.4
ERBB3-210ENST00000549472 PDCLQ13371 301 aa12.57□□□□□ -0.4
ERBB3-210ENST00000549472 ORC1Q13415 861 aa12.57□□□□□ -0.4
ERBB3-210ENST00000549472 TUSC3Q13454 348 aa12.57□□□□□ -0.4
ERBB3-210ENST00000549472 PKDCCQ504Y2 493 aa12.57□□□□□ -0.4
ERBB3-210ENST00000549472 GLE1Q53GS7 698 aaKnown RBP12.57□□□□□ -0.4
ERBB3-210ENST00000549472 DNAJC24Q6P3W2 148 aa12.57□□□□□ -0.4
ERBB3-210ENST00000549472 ADGRF2Q8IZF7 708 aa12.57□□□□□ -0.4
ERBB3-210ENST00000549472 IPO4Q8TEX9 1081 aaKnown RBP12.57□□□□□ -0.4
ERBB3-210ENST00000549472 FNIP1Q8TF40 1166 aa12.57□□□□□ -0.4
ERBB3-210ENST00000549472 STK32AQ8WU08 396 aa12.57□□□□□ -0.4
ERBB3-210ENST00000549472 SEPT8Q92599 483 aa12.57□□□□□ -0.4
ERBB3-210ENST00000549472 APBB2Q92870 758 aa12.57□□□□□ -0.4
ERBB3-210ENST00000549472 C18orf8Q96DM3 657 aa12.57□□□□□ -0.4
ERBB3-210ENST00000549472 ABHD8Q96I13 439 aa12.57□□□□□ -0.4
ERBB3-210ENST00000549472 MS4A14Q96JA4 679 aa12.57□□□□□ -0.4
ERBB3-210ENST00000549472 PPP1R12CQ9BZL4 782 aa12.57□□□□□ -0.4
ERBB3-210ENST00000549472 MIOSQ9NXC5 875 aa12.57□□□□□ -0.4
ERBB3-210ENST00000549472 HESX1Q9UBX0 185 aa12.57□□□□□ -0.4
ERBB3-210ENST00000549472 CYTH4Q9UIA0 394 aa12.57□□□□□ -0.4
ERBB3-210ENST00000549472 RAB21Q9UL25 225 aa12.57□□□□□ -0.4
ERBB3-210ENST00000549472 NME7Q9Y5B8 376 aa12.57□□□□□ -0.4
ERBB3-210ENST00000549472 TSC2P49815 1807 aa12.56□□□□□ -0.4
ERBB3-210ENST00000549472 SIGLEC16A6NMB1 481 aa12.56□□□□□ -0.4
ERBB3-210ENST00000549472 TMEM110-MUSTN1A8MSY1 372 aa12.56□□□□□ -0.4
ERBB3-210ENST00000549472 CYB561D2O14569 222 aa12.56□□□□□ -0.4
ERBB3-210ENST00000549472 PSTPIP1O43586 416 aa12.56□□□□□ -0.4
ERBB3-210ENST00000549472 FGFR1P11362 822 aa12.56□□□□□ -0.4
ERBB3-210ENST00000549472 RFC2P35250 354 aa12.56□□□□□ -0.4
ERBB3-210ENST00000549472 LHX1P48742 406 aa12.56□□□□□ -0.4
ERBB3-210ENST00000549472 CLCNKBP51801 687 aa12.56□□□□□ -0.4
ERBB3-210ENST00000549472 RWDD2BP57060 319 aa12.56□□□□□ -0.4
ERBB3-210ENST00000549472 C2orf54Q08AI8 447 aa12.56□□□□□ -0.4
ERBB3-210ENST00000549472 FAAP100Q0VG06 881 aa12.56□□□□□ -0.4
ERBB3-210ENST00000549472 PIGHQ14442 188 aaPredicted RBP12.56□□□□□ -0.4
ERBB3-210ENST00000549472 PPP2R5EQ16537 467 aa12.56□□□□□ -0.4
ERBB3-210ENST00000549472 PTPROQ16827 1216 aa12.56□□□□□ -0.4
ERBB3-210ENST00000549472 UPP1Q16831 310 aa12.56□□□□□ -0.4
ERBB3-210ENST00000549472 LRRC26Q2I0M4 334 aa12.56□□□□□ -0.4
ERBB3-210ENST00000549472 C2CD6Q53TS8 623 aa12.56□□□□□ -0.4
ERBB3-210ENST00000549472 PPP1R26Q5T8A7 1209 aaPredicted RBP12.56□□□□□ -0.4
ERBB3-210ENST00000549472 DCAF12L1Q5VU92 463 aa12.56□□□□□ -0.4
ERBB3-210ENST00000549472 WDR93Q6P2C0 686 aa12.56□□□□□ -0.4
ERBB3-210ENST00000549472 MTERF4Q7Z6M4 381 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms