RNA–Protein interactions for RNA: ENST00000545026.1

LEMD3-206, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-206ENST00000545026 RAD54BQ9Y620 910 aa7.58□□□□□ -1.2
LEMD3-206ENST00000545026 GOLGA6L3A6NEY3 463 aa7.57□□□□□ -1.2
LEMD3-206ENST00000545026 RAB27BO00194 218 aa7.57□□□□□ -1.2
LEMD3-206ENST00000545026 SUN1O94901 812 aa7.57□□□□□ -1.2
LEMD3-206ENST00000545026 ELANEP08246 267 aa7.57□□□□□ -1.2
LEMD3-206ENST00000545026 SPATA31D3P0C874 917 aa7.57□□□□□ -1.2
LEMD3-206ENST00000545026 KCNA2P16389 499 aa7.57□□□□□ -1.2
LEMD3-206ENST00000545026 GABRB3P28472 473 aa7.57□□□□□ -1.2
LEMD3-206ENST00000545026 GCLCP48506 637 aaPredicted RBP7.57□□□□□ -1.2
LEMD3-206ENST00000545026 OCA2Q04671 838 aa7.57□□□□□ -1.2
LEMD3-206ENST00000545026 GALNT1Q10472 559 aaPredicted RBP7.57□□□□□ -1.2
LEMD3-206ENST00000545026 BLMHQ13867 455 aa7.57□□□□□ -1.2
LEMD3-206ENST00000545026 RRP1BQ14684 758 aaKnown RBP7.57□□□□□ -1.2
LEMD3-206ENST00000545026 CCDC38Q502W7 563 aa7.57□□□□□ -1.2
LEMD3-206ENST00000545026 GGT6Q6P531 493 aa7.57□□□□□ -1.2
LEMD3-206ENST00000545026 TLDC1Q6P9B6 456 aa7.57□□□□□ -1.2
LEMD3-206ENST00000545026 SPATA31D4Q6ZUB0 917 aa7.57□□□□□ -1.2
LEMD3-206ENST00000545026 ZNF280BQ86YH2 543 aa7.57□□□□□ -1.2
LEMD3-206ENST00000545026 MAGEB5Q9BZ81 275 aa7.57□□□□□ -1.2
LEMD3-206ENST00000545026 TM7SF3Q9NS93 570 aa7.57□□□□□ -1.2
LEMD3-206ENST00000545026 KRTAP9-6A0A140TA67 174 aa7.56□□□□□ -1.2
LEMD3-206ENST00000545026 hCG_1642624A0A1W2PR95 340 aa7.56□□□□□ -1.2
LEMD3-206ENST00000545026 FAM234BA2RU67 622 aa7.56□□□□□ -1.2
LEMD3-206ENST00000545026 AHRRA9YTQ3 701 aa7.56□□□□□ -1.2
LEMD3-206ENST00000545026 H7C4K7 107 aa7.56□□□□□ -1.2
LEMD3-206ENST00000545026 TRIM24O15164 1050 aa7.56□□□□□ -1.2
LEMD3-206ENST00000545026 CCP110O43303 1012 aa7.56□□□□□ -1.2
LEMD3-206ENST00000545026 KCNQ3O43525 872 aa7.56□□□□□ -1.2
LEMD3-206ENST00000545026 GPANK1O95872 356 aa7.56□□□□□ -1.2
LEMD3-206ENST00000545026 CSTBP04080 98 aaKnown RBP7.56□□□□□ -1.2
LEMD3-206ENST00000545026 GRK6P43250 576 aa7.56□□□□□ -1.2
LEMD3-206ENST00000545026 COPAP53621 1224 aa7.56□□□□□ -1.2
LEMD3-206ENST00000545026 RAPGEF1Q13905 1077 aa7.56□□□□□ -1.2
LEMD3-206ENST00000545026 CNGB1Q14028 1251 aaPredicted RBP7.56□□□□□ -1.2
LEMD3-206ENST00000545026 ARHGEF7Q14155 803 aa7.56□□□□□ -1.2
LEMD3-206ENST00000545026 ZIK1Q3SY52 487 aaPredicted RBP7.56□□□□□ -1.2
LEMD3-206ENST00000545026 GDF7Q7Z4P5 450 aa7.56□□□□□ -1.2
LEMD3-206ENST00000545026 MAPKAPK5Q8IW41 473 aa7.56□□□□□ -1.2
LEMD3-206ENST00000545026 GLIS1Q8NBF1 620 aa7.56□□□□□ -1.2
LEMD3-206ENST00000545026 ZNF384Q8TF68 577 aa7.56□□□□□ -1.2
LEMD3-206ENST00000545026 MUL1Q969V5 352 aa7.56□□□□□ -1.2
LEMD3-206ENST00000545026 AGO4Q9HCK5 861 aaKnown RBP7.56□□□□□ -1.2
LEMD3-206ENST00000545026 ZSCAN32Q9NX65 697 aa7.56□□□□□ -1.2
LEMD3-206ENST00000545026 LUZP4Q9P127 313 aa7.56□□□□□ -1.2
LEMD3-206ENST00000545026 DKK4Q9UBT3 224 aa7.56□□□□□ -1.2
LEMD3-206ENST00000545026 SORCS3Q9UPU3 1222 aa7.56□□□□□ -1.2
LEMD3-206ENST00000545026 SHOC2Q9UQ13 582 aa7.56□□□□□ -1.2
LEMD3-206ENST00000545026 E7ENX8 843 aa7.55□□□□□ -1.2
LEMD3-206ENST00000545026 SKAP2O75563 359 aaPredicted RBP7.55□□□□□ -1.2
LEMD3-206ENST00000545026 RPS6KA4O75676 772 aa7.55□□□□□ -1.2
LEMD3-206ENST00000545026 INMTO95050 263 aa7.55□□□□□ -1.2
LEMD3-206ENST00000545026 CPT1AP50416 773 aa7.55□□□□□ -1.2
LEMD3-206ENST00000545026 ANXA11P50995 505 aaKnown RBP7.55□□□□□ -1.2
LEMD3-206ENST00000545026 LOXL3P58215 753 aa7.55□□□□□ -1.2
LEMD3-206ENST00000545026 LILRA4P59901 499 aa7.55□□□□□ -1.2
LEMD3-206ENST00000545026 MC2RQ01718 297 aa7.55□□□□□ -1.2
LEMD3-206ENST00000545026 TAP2Q03519 686 aa7.55□□□□□ -1.2
LEMD3-206ENST00000545026 PFKFB4Q16877 469 aa7.55□□□□□ -1.2
LEMD3-206ENST00000545026 INSCQ1MX18 579 aa7.55□□□□□ -1.2
LEMD3-206ENST00000545026 PRR16Q569H4 304 aa7.55□□□□□ -1.2
LEMD3-206ENST00000545026 PLAG1Q6DJT9 500 aa7.55□□□□□ -1.2
LEMD3-206ENST00000545026 MYCT1Q8N699 235 aa7.55□□□□□ -1.2
LEMD3-206ENST00000545026 PPM1EQ8WY54 764 aa7.55□□□□□ -1.2
LEMD3-206ENST00000545026 ADOQ96SZ5 270 aa7.55□□□□□ -1.2
LEMD3-206ENST00000545026 OBP2BQ9NPH6 170 aa7.55□□□□□ -1.2
LEMD3-206ENST00000545026 RGL1Q9NZL6 768 aa7.55□□□□□ -1.2
LEMD3-206ENST00000545026 TRPM5Q9NZQ8 1165 aa7.55□□□□□ -1.2
LEMD3-206ENST00000545026 NEU2Q9Y3R4 380 aa7.55□□□□□ -1.2
LEMD3-206ENST00000545026 CCDC189A1A4V9 331 aa7.54□□□□□ -1.2
LEMD3-206ENST00000545026 PODXLO00592 558 aa7.54□□□□□ -1.2
LEMD3-206ENST00000545026 SCAF4O95104 1147 aaKnown RBP7.54□□□□□ -1.2
LEMD3-206ENST00000545026 ZFPL1O95159 310 aa7.54□□□□□ -1.2
LEMD3-206ENST00000545026 PTDSS1P48651 473 aaKnown RBP7.54□□□□□ -1.2
LEMD3-206ENST00000545026 PXNP49023 591 aaPredicted RBP7.54□□□□□ -1.2
LEMD3-206ENST00000545026 CRHR2Q13324 411 aa7.54□□□□□ -1.2
LEMD3-206ENST00000545026 RAB30Q15771 203 aa7.54□□□□□ -1.2
LEMD3-206ENST00000545026 MGAT5BQ3V5L5 792 aa7.54□□□□□ -1.2
LEMD3-206ENST00000545026 ZACNQ401N2 412 aa7.54□□□□□ -1.2
LEMD3-206ENST00000545026 HS1BP3Q53T59 392 aa7.54□□□□□ -1.2
LEMD3-206ENST00000545026 B3GNTL1Q67FW5 361 aaPredicted RBP7.54□□□□□ -1.2
LEMD3-206ENST00000545026 FBXO38Q6PIJ6 1188 aa7.54□□□□□ -1.2
LEMD3-206ENST00000545026 FOXR2Q6PJQ5 311 aa7.54□□□□□ -1.2
LEMD3-206ENST00000545026 KIAA0408Q6ZU52 694 aa7.54□□□□□ -1.2
LEMD3-206ENST00000545026 KCTD20Q7Z5Y7 419 aa7.54□□□□□ -1.2
LEMD3-206ENST00000545026 CACNA2D3Q8IZS8 1091 aa7.54□□□□□ -1.2
LEMD3-206ENST00000545026 SPATA5Q8NB90 893 aa7.54□□□□□ -1.2
LEMD3-206ENST00000545026 CCDC150Q8NCX0 1101 aa7.54□□□□□ -1.2
LEMD3-206ENST00000545026 CCT6BQ92526 530 aa7.54□□□□□ -1.2
LEMD3-206ENST00000545026 EVI5LQ96CN4 794 aa7.54□□□□□ -1.2
LEMD3-206ENST00000545026 SNX27Q96L92 541 aa7.54□□□□□ -1.2
LEMD3-206ENST00000545026 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.54□□□□□ -1.2
LEMD3-206ENST00000545026 HEYLQ9NQ87 328 aaPredicted RBP7.54□□□□□ -1.2
LEMD3-206ENST00000545026 NECTIN3Q9NQS3 549 aa7.54□□□□□ -1.2
LEMD3-206ENST00000545026 DNMT3BQ9UBC3 853 aaKnown RBP7.54□□□□□ -1.2
LEMD3-206ENST00000545026 KCNE5Q9UJ90 142 aa7.54□□□□□ -1.2
LEMD3-206ENST00000545026 PCDHGB3Q9Y5G1 929 aa7.54□□□□□ -1.2
LEMD3-206ENST00000545026 FPGT-TNNI3KV9GXZ4 949 aa7.54□□□□□ -1.2
LEMD3-206ENST00000545026 A0A0G2JLL6 359 aaPredicted RBP7.53□□□□□ -1.2
LEMD3-206ENST00000545026 PRAMEF33A0A0G2JMD5 474 aa7.53□□□□□ -1.2
LEMD3-206ENST00000545026 A0A1W2PS29 197 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms