RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 DPP3Q9NY33 737 aa12.81□□□□□ -0.36
GABPB1-206ENST00000543881 KIF26AQ9ULI4 1882 aaPredicted RBP12.81□□□□□ -0.36
GABPB1-206ENST00000543881 DPYSL4O14531 572 aa12.8□□□□□ -0.36
GABPB1-206ENST00000543881 EXTL3O43909 919 aa12.8□□□□□ -0.36
GABPB1-206ENST00000543881 KCNK5O95279 499 aa12.8□□□□□ -0.36
GABPB1-206ENST00000543881 GCNT3O95395 438 aa12.8□□□□□ -0.36
GABPB1-206ENST00000543881 PROS1P07225 676 aa12.8□□□□□ -0.36
GABPB1-206ENST00000543881 CCDC192P0DO97 292 aa12.8□□□□□ -0.36
GABPB1-206ENST00000543881 IDEP14735 1019 aa12.8□□□□□ -0.36
GABPB1-206ENST00000543881 PXNP49023 591 aaPredicted RBP12.8□□□□□ -0.36
GABPB1-206ENST00000543881 EPHB3P54753 998 aa12.8□□□□□ -0.36
GABPB1-206ENST00000543881 POU5F1Q01860 360 aaKnown RBP12.8□□□□□ -0.36
GABPB1-206ENST00000543881 PLD1Q13393 1074 aa12.8□□□□□ -0.36
GABPB1-206ENST00000543881 ARHGAP29Q52LW3 1261 aa12.8□□□□□ -0.36
GABPB1-206ENST00000543881 PDILTQ8N807 584 aa12.8□□□□□ -0.36
GABPB1-206ENST00000543881 SAAL1Q96ER3 474 aa12.8□□□□□ -0.36
GABPB1-206ENST00000543881 FAM84AQ96KN4 292 aa12.8□□□□□ -0.36
GABPB1-206ENST00000543881 ACCSQ96QU6 501 aa12.8□□□□□ -0.36
GABPB1-206ENST00000543881 FAM213AQ9BRX8 229 aa12.8□□□□□ -0.36
GABPB1-206ENST00000543881 MKNK1Q9BUB5 465 aa12.8□□□□□ -0.36
GABPB1-206ENST00000543881 LSM14BQ9BX40 385 aaKnown RBP12.8□□□□□ -0.36
GABPB1-206ENST00000543881 SMOC1Q9H4F8 434 aa12.8□□□□□ -0.36
GABPB1-206ENST00000543881 TFIP11Q9UBB9 837 aaKnown RBP12.8□□□□□ -0.36
GABPB1-206ENST00000543881 FRYQ5TBA9 3013 aa12.8□□□□□ -0.36
GABPB1-206ENST00000543881 NUP210Q8TEM1 1887 aaPredicted RBP12.8□□□□□ -0.36
GABPB1-206ENST00000543881 CYB561D2O14569 222 aa12.79□□□□□ -0.36
GABPB1-206ENST00000543881 PAX3P23760 479 aa12.79□□□□□ -0.36
GABPB1-206ENST00000543881 POSTNQ15063 836 aa12.79□□□□□ -0.36
GABPB1-206ENST00000543881 PLA2G2CQ5R387 149 aa12.79□□□□□ -0.36
GABPB1-206ENST00000543881 PKN3Q6P5Z2 889 aa12.79□□□□□ -0.36
GABPB1-206ENST00000543881 LRRTM3Q86VH5 581 aa12.79□□□□□ -0.36
GABPB1-206ENST00000543881 GLIS3Q8NEA6 775 aa12.79□□□□□ -0.36
GABPB1-206ENST00000543881 PYM1Q9BRP8 204 aaKnown RBP12.79□□□□□ -0.36
GABPB1-206ENST00000543881 ZCWPW1Q9H0M4 648 aa12.79□□□□□ -0.36
GABPB1-206ENST00000543881 PANK4Q9NVE7 773 aa12.79□□□□□ -0.36
GABPB1-206ENST00000543881 FAM208BQ5VWN6 2430 aa12.79□□□□□ -0.36
GABPB1-206ENST00000543881 BAHCC1Q9P281 2608 aa12.79□□□□□ -0.36
GABPB1-206ENST00000543881 CCDC163A0A0D9SF12 145 aa12.78□□□□□ -0.36
GABPB1-206ENST00000543881 GOLGA8IPA6NC78 632 aa12.78□□□□□ -0.36
GABPB1-206ENST00000543881 GOLGA8JA6NMD2 632 aa12.78□□□□□ -0.36
GABPB1-206ENST00000543881 IL18RAPO95256 599 aa12.78□□□□□ -0.36
GABPB1-206ENST00000543881 MPLP40238 635 aa12.78□□□□□ -0.36
GABPB1-206ENST00000543881 ALDH1A3P47895 512 aa12.78□□□□□ -0.36
GABPB1-206ENST00000543881 TAF6P49848 677 aa12.78□□□□□ -0.36
GABPB1-206ENST00000543881 EML5Q05BV3 1969 aa12.78□□□□□ -0.36
GABPB1-206ENST00000543881 TNK2Q07912 1038 aa12.78□□□□□ -0.36
GABPB1-206ENST00000543881 COL9A2Q14055 689 aaPredicted RBP12.78□□□□□ -0.36
GABPB1-206ENST00000543881 STK38Q15208 465 aa12.78□□□□□ -0.36
GABPB1-206ENST00000543881 E2F4Q16254 413 aa12.78□□□□□ -0.36
GABPB1-206ENST00000543881 SLC39A12Q504Y0 691 aa12.78□□□□□ -0.36
GABPB1-206ENST00000543881 WSCD1Q658N2 575 aa12.78□□□□□ -0.36
GABPB1-206ENST00000543881 PSAPL1Q6NUJ1 521 aa12.78□□□□□ -0.36
GABPB1-206ENST00000543881 ARMCX5Q6P1M9 558 aa12.78□□□□□ -0.36
GABPB1-206ENST00000543881 GAREM2Q75VX8 874 aa12.78□□□□□ -0.36
GABPB1-206ENST00000543881 DNAJB7Q7Z6W7 309 aaPredicted RBP12.78□□□□□ -0.36
GABPB1-206ENST00000543881 BRSK2Q8IWQ3 736 aa12.78□□□□□ -0.36
GABPB1-206ENST00000543881 CXorf38Q8TB03 319 aa12.78□□□□□ -0.36
GABPB1-206ENST00000543881 HPS3Q969F9 1004 aa12.78□□□□□ -0.36
GABPB1-206ENST00000543881 CBWD1Q9BRT8 395 aa12.78□□□□□ -0.36
GABPB1-206ENST00000543881 ATXN3LQ9H3M9 355 aa12.78□□□□□ -0.36
GABPB1-206ENST00000543881 PCIF1Q9H4Z3 704 aa12.78□□□□□ -0.36
GABPB1-206ENST00000543881 OBP2AQ9NY56 170 aa12.78□□□□□ -0.36
GABPB1-206ENST00000543881 EXOC7Q9UPT5 735 aa12.78□□□□□ -0.36
GABPB1-206ENST00000543881 PCDHB13Q9Y5F0 798 aa12.78□□□□□ -0.36
GABPB1-206ENST00000543881 PCDHGA5Q9Y5G8 931 aa12.78□□□□□ -0.36
GABPB1-206ENST00000543881 ATG2BQ96BY7 2078 aa12.78□□□□□ -0.36
GABPB1-206ENST00000543881 KPNA7A9QM74 516 aa12.78□□□□□ -0.36
GABPB1-206ENST00000543881 C1QTNF9BB2RNN3 333 aa12.78□□□□□ -0.36
GABPB1-206ENST00000543881 SPTLC2O15270 562 aa12.78□□□□□ -0.36
GABPB1-206ENST00000543881 PRPF6O94906 941 aaKnown RBP12.78□□□□□ -0.36
GABPB1-206ENST00000543881 PRAMEF12O95522 483 aa12.78□□□□□ -0.36
GABPB1-206ENST00000543881 C1QTNF9P0C862 333 aa12.78□□□□□ -0.36
GABPB1-206ENST00000543881 ATF6P18850 670 aa12.78□□□□□ -0.36
GABPB1-206ENST00000543881 GARTP22102 1010 aa12.78□□□□□ -0.36
GABPB1-206ENST00000543881 PLCB2Q00722 1185 aa12.78□□□□□ -0.36
GABPB1-206ENST00000543881 ITPRIPL2Q3MIP1 535 aa12.78□□□□□ -0.36
GABPB1-206ENST00000543881 GPR158Q5T848 1215 aa12.78□□□□□ -0.36
GABPB1-206ENST00000543881 FOXD4L5Q5VV16 416 aaPredicted RBP12.78□□□□□ -0.36
GABPB1-206ENST00000543881 RNF43Q68DV7 783 aa12.78□□□□□ -0.36
GABPB1-206ENST00000543881 UNQ6494/PRO21346Q6UXR6 183 aa12.78□□□□□ -0.36
GABPB1-206ENST00000543881 C1orf127Q8N9H9 656 aa12.78□□□□□ -0.36
GABPB1-206ENST00000543881 BPIFB1Q8TDL5 484 aa12.78□□□□□ -0.36
GABPB1-206ENST00000543881 FOXD4L4Q8WXT5 416 aaPredicted RBP12.78□□□□□ -0.36
GABPB1-206ENST00000543881 SNX21Q969T3 373 aa12.78□□□□□ -0.36
GABPB1-206ENST00000543881 PSMG2Q969U7 264 aa12.78□□□□□ -0.36
GABPB1-206ENST00000543881 ZC3H10Q96K80 434 aaKnown RBP12.78□□□□□ -0.36
GABPB1-206ENST00000543881 LPIN3Q9BQK8 851 aa12.78□□□□□ -0.36
GABPB1-206ENST00000543881 VPS45Q9NRW7 570 aa12.78□□□□□ -0.36
GABPB1-206ENST00000543881 HSFX1Q9UBD0 423 aa12.78□□□□□ -0.36
GABPB1-206ENST00000543881 DSEQ9UL01 958 aa12.78□□□□□ -0.36
GABPB1-206ENST00000543881 ZMIZ1Q9ULJ6 1067 aa12.78□□□□□ -0.36
GABPB1-206ENST00000543881 SLC8A2Q9UPR5 921 aa12.78□□□□□ -0.36
GABPB1-206ENST00000543881 ASB3Q9Y575 518 aa12.78□□□□□ -0.36
GABPB1-206ENST00000543881 TULP1O00294 542 aaPredicted RBP12.77□□□□□ -0.37
GABPB1-206ENST00000543881 ATG13O75143 517 aa12.77□□□□□ -0.37
GABPB1-206ENST00000543881 PPP6R2O75170 966 aa12.77□□□□□ -0.37
GABPB1-206ENST00000543881 AKAP3O75969 853 aa12.77□□□□□ -0.37
GABPB1-206ENST00000543881 FGF19O95750 216 aa12.77□□□□□ -0.37
GABPB1-206ENST00000543881 ITGB3P05106 788 aa12.77□□□□□ -0.37
GABPB1-206ENST00000543881 GABRR2P28476 465 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms