RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 SLC1A1P43005 524 aa15.59■□□□□ 0.09
DDX55-209ENST00000542286 DUOXA2Q1HG44 320 aa15.59■□□□□ 0.09
DDX55-209ENST00000542286 ATF7IP2Q5U623 682 aa15.59■□□□□ 0.09
DDX55-209ENST00000542286 PNMA8AQ86V59 439 aaPredicted RBP15.59■□□□□ 0.09
DDX55-209ENST00000542286 UBR7Q8N806 425 aa15.59■□□□□ 0.09
DDX55-209ENST00000542286 ZNF483Q8TF39 744 aaPredicted RBP15.59■□□□□ 0.09
DDX55-209ENST00000542286 SLITRK1Q96PX8 696 aa15.59■□□□□ 0.09
DDX55-209ENST00000542286 ELAC2Q9BQ52 826 aaKnown RBP15.59■□□□□ 0.09
DDX55-209ENST00000542286 NIF3L1Q9GZT8 377 aa15.59■□□□□ 0.09
DDX55-209ENST00000542286 TMEM134Q9H6X4 195 aa15.59■□□□□ 0.09
DDX55-209ENST00000542286 GINS2Q9Y248 185 aa15.59■□□□□ 0.09
DDX55-209ENST00000542286 NEU2Q9Y3R4 380 aa15.59■□□□□ 0.09
DDX55-209ENST00000542286 TBXAS1P24557 533 aaPredicted RBP15.58■□□□□ 0.09
DDX55-209ENST00000542286 IL1R2P27930 398 aa15.58■□□□□ 0.09
DDX55-209ENST00000542286 CELF3Q5SZQ8 465 aaKnown RBP15.58■□□□□ 0.09
DDX55-209ENST00000542286 WDR49Q8IV35 697 aa15.58■□□□□ 0.09
DDX55-209ENST00000542286 ARFGAP1Q8N6T3 406 aa15.58■□□□□ 0.09
DDX55-209ENST00000542286 DCPSQ96C86 337 aaKnown RBP15.58■□□□□ 0.09
DDX55-209ENST00000542286 CHMP6Q96FZ7 201 aa15.58■□□□□ 0.09
DDX55-209ENST00000542286 MRPL47Q9HD33 250 aaKnown RBP15.58■□□□□ 0.09
DDX55-209ENST00000542286 BATF3Q9NR55 127 aa15.58■□□□□ 0.09
DDX55-209ENST00000542286 WHRNQ9P202 907 aa15.58■□□□□ 0.09
DDX55-209ENST00000542286 L3MBTL1Q9Y468 752 aa15.58■□□□□ 0.09
DDX55-209ENST00000542286 ANP32DO95626 131 aa15.58■□□□□ 0.08
DDX55-209ENST00000542286 C6orf118Q5T5N4 469 aa15.58■□□□□ 0.08
DDX55-209ENST00000542286 SH3PXD2AQ5TCZ1 1133 aa15.58■□□□□ 0.08
DDX55-209ENST00000542286 KATNAL2Q8IYT4 538 aa15.58■□□□□ 0.08
DDX55-209ENST00000542286 RNF217Q8TC41 542 aa15.58■□□□□ 0.08
DDX55-209ENST00000542286 ZNF317Q96PQ6 595 aaPredicted RBP15.58■□□□□ 0.08
DDX55-209ENST00000542286 KIF9Q9HAQ2 790 aa15.58■□□□□ 0.08
DDX55-209ENST00000542286 SIX4Q9UIU6 781 aa15.58■□□□□ 0.08
DDX55-209ENST00000542286 TMEM120BA0PK00 339 aa15.58■□□□□ 0.08
DDX55-209ENST00000542286 GRAP2O75791 330 aa15.58■□□□□ 0.08
DDX55-209ENST00000542286 TTC4O95801 387 aa15.58■□□□□ 0.08
DDX55-209ENST00000542286 POTEJP0CG39 1038 aa15.58■□□□□ 0.08
DDX55-209ENST00000542286 C1QBPQ07021 282 aaKnown RBP15.58■□□□□ 0.08
DDX55-209ENST00000542286 ERICH1Q86X53 443 aa15.58■□□□□ 0.08
DDX55-209ENST00000542286 ZBTB8OSQ8IWT0 167 aa15.58■□□□□ 0.08
DDX55-209ENST00000542286 CCDC63Q8NA47 563 aa15.58■□□□□ 0.08
DDX55-209ENST00000542286 TRIM11Q96F44 468 aa15.58■□□□□ 0.08
DDX55-209ENST00000542286 CPXM1Q96SM3 734 aa15.58■□□□□ 0.08
DDX55-209ENST00000542286 CDT1Q9H211 546 aa15.58■□□□□ 0.08
DDX55-209ENST00000542286 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.58■□□□□ 0.08
DDX55-209ENST00000542286 CNTN6Q9UQ52 1028 aa15.58■□□□□ 0.08
DDX55-209ENST00000542286 A0A087WZ62 844 aa15.57■□□□□ 0.08
DDX55-209ENST00000542286 PSTPIP1O43586 416 aa15.57■□□□□ 0.08
DDX55-209ENST00000542286 MAP3K6O95382 1288 aa15.57■□□□□ 0.08
DDX55-209ENST00000542286 ITGB3P05106 788 aa15.57■□□□□ 0.08
DDX55-209ENST00000542286 ITIH2P19823 946 aa15.57■□□□□ 0.08
DDX55-209ENST00000542286 ARSEP51690 589 aa15.57■□□□□ 0.08
DDX55-209ENST00000542286 GDF10P55107 478 aa15.57■□□□□ 0.08
DDX55-209ENST00000542286 LACTBP83111 547 aaPredicted RBP15.57■□□□□ 0.08
DDX55-209ENST00000542286 TMEM62Q0P6H9 643 aa15.57■□□□□ 0.08
DDX55-209ENST00000542286 GPS1Q13098 491 aa15.57■□□□□ 0.08
DDX55-209ENST00000542286 IER5Q5VY09 327 aa15.57■□□□□ 0.08
DDX55-209ENST00000542286 VSTM1Q6UX27 236 aa15.57■□□□□ 0.08
DDX55-209ENST00000542286 ZPBP2Q6X784 338 aa15.57■□□□□ 0.08
DDX55-209ENST00000542286 SRRM1Q8IYB3 904 aaKnown RBP15.57■□□□□ 0.08
DDX55-209ENST00000542286 CCDC197Q8NCU1 140 aa15.57■□□□□ 0.08
DDX55-209ENST00000542286 UBA3Q8TBC4 463 aa15.57■□□□□ 0.08
DDX55-209ENST00000542286 PIWIL1Q96J94 861 aaKnown RBP15.57■□□□□ 0.08
DDX55-209ENST00000542286 FAM81BQ96LP2 452 aa15.57■□□□□ 0.08
DDX55-209ENST00000542286 FDXACB1Q9BRP7 624 aaPredicted RBP15.57■□□□□ 0.08
DDX55-209ENST00000542286 RNF181Q9P0P0 153 aa15.57■□□□□ 0.08
DDX55-209ENST00000542286 CNGA2Q16280 664 aa15.57■□□□□ 0.08
DDX55-209ENST00000542286 ANKMY2Q8IV38 441 aa15.57■□□□□ 0.08
DDX55-209ENST00000542286 C1orf127Q8N9H9 656 aa15.57■□□□□ 0.08
DDX55-209ENST00000542286 RBM15Q96T37 977 aaKnown RBP eCLIP15.57■□□□□ 0.083e-10■■□□□ 13.4
DDX55-209ENST00000542286 MMP19Q99542 508 aa15.57■□□□□ 0.08
DDX55-209ENST00000542286 SAYSD1Q9NPB0 183 aa15.57■□□□□ 0.08
DDX55-209ENST00000542286 C15orf41Q9Y2V0 281 aa15.57■□□□□ 0.08
DDX55-209ENST00000542286 OTOFQ9HC10 1997 aa15.57■□□□□ 0.08
DDX55-209ENST00000542286 A0A0G2JLL6 359 aaPredicted RBP15.56■□□□□ 0.08
DDX55-209ENST00000542286 TCRBV5S1A1TA0A578 114 aa15.56■□□□□ 0.08
DDX55-209ENST00000542286 LACTBL1A8MY62 500 aa15.56■□□□□ 0.08
DDX55-209ENST00000542286 LIASO43766 372 aa15.56■□□□□ 0.08
DDX55-209ENST00000542286 SPAG7O75391 227 aa15.56■□□□□ 0.08
DDX55-209ENST00000542286 AGTP01019 485 aa15.56■□□□□ 0.08
DDX55-209ENST00000542286 KLRC2P26717 231 aa15.56■□□□□ 0.08
DDX55-209ENST00000542286 MCL1Q07820 350 aa15.56■□□□□ 0.08
DDX55-209ENST00000542286 KCTD2Q14681 263 aa15.56■□□□□ 0.08
DDX55-209ENST00000542286 CCNG2Q16589 344 aa15.56■□□□□ 0.08
DDX55-209ENST00000542286 JADE1Q6IE81 842 aa15.56■□□□□ 0.08
DDX55-209ENST00000542286 SPOCD1Q6ZMY3 1216 aa15.56■□□□□ 0.08
DDX55-209ENST00000542286 BZW1Q7L1Q6 419 aaKnown RBP15.56■□□□□ 0.08
DDX55-209ENST00000542286 PRRT2Q7Z6L0 340 aaPredicted RBP15.56■□□□□ 0.08
DDX55-209ENST00000542286 TBC1D1Q86TI0 1168 aaPredicted RBP15.56■□□□□ 0.08
DDX55-209ENST00000542286 EXD1Q8NHP7 514 aa15.56■□□□□ 0.08
DDX55-209ENST00000542286 OPTNQ96CV9 577 aa15.56■□□□□ 0.08
DDX55-209ENST00000542286 TRAIPQ9BWF2 469 aa15.56■□□□□ 0.08
DDX55-209ENST00000542286 IP6K2Q9UHH9 426 aa15.56■□□□□ 0.08
DDX55-209ENST00000542286 SCINQ9Y6U3 715 aa15.56■□□□□ 0.08
DDX55-209ENST00000542286 PECAM1P16284 738 aaPredicted RBP15.56■□□□□ 0.08
DDX55-209ENST00000542286 PSMA2P25787 234 aa15.56■□□□□ 0.08
DDX55-209ENST00000542286 PEX19P40855 299 aa15.56■□□□□ 0.08
DDX55-209ENST00000542286 INHBEP58166 350 aa15.56■□□□□ 0.08
DDX55-209ENST00000542286 MBTD1Q05BQ5 628 aa15.56■□□□□ 0.08
DDX55-209ENST00000542286 SGSM1Q2NKQ1 1148 aa15.56■□□□□ 0.08
DDX55-209ENST00000542286 CDCA2Q69YH5 1023 aaPredicted RBP15.56■□□□□ 0.08
DDX55-209ENST00000542286 MPZL3Q6UWV2 235 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms