RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 RAP1GAPP47736 663 aa18.91■□□□□ 0.62
GNE-204ENST00000539208 ZFYVE27Q5T4F4 411 aa18.91■□□□□ 0.62
GNE-204ENST00000539208 ZCCHC9Q8N567 271 aaKnown RBP18.91■□□□□ 0.62
GNE-204ENST00000539208 ALLCQ8N6M5 410 aa18.91■□□□□ 0.62
GNE-204ENST00000539208 ATXN2LQ8WWM7 1075 aaKnown RBP18.91■□□□□ 0.62
GNE-204ENST00000539208 SLC10A4Q96EP9 437 aa18.91■□□□□ 0.62
GNE-204ENST00000539208 NINJ2Q9NZG7 142 aa18.91■□□□□ 0.62
GNE-204ENST00000539208 PLXNA1Q9UIW2 1896 aa18.9■□□□□ 0.62
GNE-204ENST00000539208 UTRNP46939 3433 aa18.9■□□□□ 0.62
GNE-204ENST00000539208 STRNO43815 780 aa18.9■□□□□ 0.62
GNE-204ENST00000539208 ITGB3P05106 788 aa18.9■□□□□ 0.62
GNE-204ENST00000539208 ADORA2AP29274 412 aa18.9■□□□□ 0.62
GNE-204ENST00000539208 GABRB2P47870 512 aa18.9■□□□□ 0.62
GNE-204ENST00000539208 CDH8P55286 799 aa18.9■□□□□ 0.62
GNE-204ENST00000539208 PTPN11Q06124 597 aaPredicted RBP18.9■□□□□ 0.62
GNE-204ENST00000539208 KYNUQ16719 465 aa18.9■□□□□ 0.62
GNE-204ENST00000539208 SLC10A6Q3KNW5 377 aa18.9■□□□□ 0.62
GNE-204ENST00000539208 KAZNQ674X7 775 aa18.9■□□□□ 0.62
GNE-204ENST00000539208 TXNRD3NBQ6F5E7 133 aa18.9■□□□□ 0.62
GNE-204ENST00000539208 CHMP6Q96FZ7 201 aa18.9■□□□□ 0.62
GNE-204ENST00000539208 TMEM176AQ96HP8 235 aa18.9■□□□□ 0.62
GNE-204ENST00000539208 SELENOSQ9BQE4 189 aa18.9■□□□□ 0.62
GNE-204ENST00000539208 C16orf70Q9BSU1 422 aa18.9■□□□□ 0.62
GNE-204ENST00000539208 FRMD8P1Q9BZ68 369 aaPredicted RBP18.9■□□□□ 0.62
GNE-204ENST00000539208 KATNBL1Q9H079 304 aa18.9■□□□□ 0.62
GNE-204ENST00000539208 DDX20Q9UHI6 824 aaKnown RBP18.9■□□□□ 0.62
GNE-204ENST00000539208 AKT3Q9Y243 479 aa18.9■□□□□ 0.62
GNE-204ENST00000539208 C3orf70A6NLC5 250 aaPredicted RBP18.89■□□□□ 0.62
GNE-204ENST00000539208 NDC80O14777 642 aa18.89■□□□□ 0.62
GNE-204ENST00000539208 STAU1O95793 577 aaKnown RBP18.89■□□□□ 0.62
GNE-204ENST00000539208 ITGAVP06756 1048 aa18.89■□□□□ 0.62
GNE-204ENST00000539208 KRT7P08729 469 aa18.89■□□□□ 0.62
GNE-204ENST00000539208 ARF4P18085 180 aaPredicted RBP18.89■□□□□ 0.62
GNE-204ENST00000539208 DRD4P21917 467 aa18.89■□□□□ 0.62
GNE-204ENST00000539208 PSMA2P25787 234 aa18.89■□□□□ 0.62
GNE-204ENST00000539208 VPS41P49754 854 aa18.89■□□□□ 0.62
GNE-204ENST00000539208 VCPP55072 806 aaKnown RBP18.89■□□□□ 0.62
GNE-204ENST00000539208 PSMC1P62191 440 aaKnown RBP18.89■□□□□ 0.62
GNE-204ENST00000539208 SLC25A11Q02978 314 aaKnown RBP18.89■□□□□ 0.62
GNE-204ENST00000539208 OASLQ15646 514 aaKnown RBP18.89■□□□□ 0.62
GNE-204ENST00000539208 LONRF1Q17RB8 773 aa18.89■□□□□ 0.62
GNE-204ENST00000539208 P3H1Q32P28 736 aa18.89■□□□□ 0.62
GNE-204ENST00000539208 GJC2Q5T442 439 aaPredicted RBP18.89■□□□□ 0.62
GNE-204ENST00000539208 MTHFD1LQ6UB35 978 aa18.89■□□□□ 0.62
GNE-204ENST00000539208 TADA2BQ86TJ2 420 aa18.89■□□□□ 0.62
GNE-204ENST00000539208 EXOC3L1Q86VI1 746 aa18.89■□□□□ 0.62
GNE-204ENST00000539208 NT5DC4Q86YG4 428 aa18.89■□□□□ 0.62
GNE-204ENST00000539208 AFG1LQ8WV93 481 aa18.89■□□□□ 0.62
GNE-204ENST00000539208 ZNF148Q9UQR1 794 aa18.89■□□□□ 0.62
GNE-204ENST00000539208 DNALI1O14645 258 aaPredicted RBP18.89■□□□□ 0.61
GNE-204ENST00000539208 CPP00450 1065 aa18.89■□□□□ 0.61
GNE-204ENST00000539208 ACAP1Q15027 740 aa18.89■□□□□ 0.61
GNE-204ENST00000539208 XYLT1Q86Y38 959 aa18.89■□□□□ 0.61
GNE-204ENST00000539208 TTC39CQ8N584 583 aa18.89■□□□□ 0.61
GNE-204ENST00000539208 ZNF317Q96PQ6 595 aaPredicted RBP18.89■□□□□ 0.61
GNE-204ENST00000539208 ELOVL4Q9GZR5 314 aa18.89■□□□□ 0.61
GNE-204ENST00000539208 SMYD3Q9H7B4 428 aa18.89■□□□□ 0.61
GNE-204ENST00000539208 C2CD2Q9Y426 696 aa18.89■□□□□ 0.61
GNE-204ENST00000539208 LRRD1A4D1F6 860 aa18.88■□□□□ 0.61
GNE-204ENST00000539208 HMGCRP04035 888 aa18.88■□□□□ 0.61
GNE-204ENST00000539208 ABHD2P08910 425 aa18.88■□□□□ 0.61
GNE-204ENST00000539208 VDRP11473 427 aa18.88■□□□□ 0.61
GNE-204ENST00000539208 CNGA2Q16280 664 aa18.88■□□□□ 0.61
GNE-204ENST00000539208 TAZQ16635 292 aa18.88■□□□□ 0.61
GNE-204ENST00000539208 HADHQ16836 314 aaKnown RBP18.88■□□□□ 0.61
GNE-204ENST00000539208 ILDR2Q71H61 639 aa18.88■□□□□ 0.61
GNE-204ENST00000539208 ARFGAP1Q8N6T3 406 aa18.88■□□□□ 0.61
GNE-204ENST00000539208 CPB2Q96IY4 423 aa18.88■□□□□ 0.61
GNE-204ENST00000539208 TWNKQ96RR1 684 aa18.88■□□□□ 0.61
GNE-204ENST00000539208 CPXM1Q96SM3 734 aa18.88■□□□□ 0.61
GNE-204ENST00000539208 INTS9Q9NV88 658 aaKnown RBP18.88■□□□□ 0.61
GNE-204ENST00000539208 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.88■□□□□ 0.61
GNE-204ENST00000539208 ITGA11Q9UKX5 1188 aa18.88■□□□□ 0.61
GNE-204ENST00000539208 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.88■□□□□ 0.61
GNE-204ENST00000539208 PLXNB2O15031 1838 aa18.88■□□□□ 0.61
GNE-204ENST00000539208 GOLGA8SH3BPF8 625 aa18.88■□□□□ 0.61
GNE-204ENST00000539208 LRCH4O75427 683 aa18.88■□□□□ 0.61
GNE-204ENST00000539208 CSDE1O75534 798 aaKnown RBP18.88■□□□□ 0.61
GNE-204ENST00000539208 TMEM132DQ14C87 1099 aa18.88■□□□□ 0.61
GNE-204ENST00000539208 QPCTQ16769 361 aa18.88■□□□□ 0.61
GNE-204ENST00000539208 OTUD6BQ8N6M0 293 aa18.88■□□□□ 0.61
GNE-204ENST00000539208 JOSD2Q8TAC2 188 aa18.88■□□□□ 0.61
GNE-204ENST00000539208 MCRS1Q96EZ8 462 aa18.88■□□□□ 0.61
GNE-204ENST00000539208 HPDLQ96IR7 371 aa18.88■□□□□ 0.61
GNE-204ENST00000539208 SEC16BQ96JE7 1060 aa18.88■□□□□ 0.61
GNE-204ENST00000539208 MORF4L1Q9UBU8 362 aa18.88■□□□□ 0.61
GNE-204ENST00000539208 LGALS13Q9UHV8 139 aa18.88■□□□□ 0.61
GNE-204ENST00000539208 H3BRB1 525 aa18.87■□□□□ 0.61
GNE-204ENST00000539208 VTNP04004 478 aa18.87■□□□□ 0.61
GNE-204ENST00000539208 HOXD8P13378 290 aaPredicted RBP18.87■□□□□ 0.61
GNE-204ENST00000539208 YBX3P16989 372 aaKnown RBP eCLIP18.87■□□□□ 0.61
GNE-204ENST00000539208 PPARDQ03181 441 aa18.87■□□□□ 0.61
GNE-204ENST00000539208 INCA1Q0VD86 236 aa18.87■□□□□ 0.61
GNE-204ENST00000539208 STAT4Q14765 748 aa18.87■□□□□ 0.61
GNE-204ENST00000539208 GKAP1Q5VSY0 366 aaPredicted RBP18.87■□□□□ 0.61
GNE-204ENST00000539208 CPLX4Q7Z7G2 160 aa18.87■□□□□ 0.61
GNE-204ENST00000539208 SLC35B2Q8TB61 432 aa18.87■□□□□ 0.61
GNE-204ENST00000539208 CCDC77Q9BR77 488 aa18.87■□□□□ 0.61
GNE-204ENST00000539208 TUT1Q9H6E5 874 aaKnown RBP18.87■□□□□ 0.61
GNE-204ENST00000539208 TJP2Q9UDY2 1190 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms