RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 ABI2Q9NYB9 513 aaPredicted RBP18.42■□□□□ 0.54
SFSWAP-205ENST00000537164 GTF3C4Q9UKN8 822 aa18.42■□□□□ 0.54
SFSWAP-205ENST00000537164 FBXL21Q9UKT6 434 aa18.42■□□□□ 0.54
SFSWAP-205ENST00000537164 CDH9Q9ULB4 789 aa18.42■□□□□ 0.54
SFSWAP-205ENST00000537164 A0A1W2PRU2 124 aa18.41■□□□□ 0.54
SFSWAP-205ENST00000537164 AKAP3O75969 853 aa18.41■□□□□ 0.54
SFSWAP-205ENST00000537164 VNN1O95497 513 aa18.41■□□□□ 0.54
SFSWAP-205ENST00000537164 ACAT1P24752 427 aaKnown RBP18.41■□□□□ 0.54
SFSWAP-205ENST00000537164 LMO2P25791 158 aa18.41■□□□□ 0.54
SFSWAP-205ENST00000537164 RPL13P26373 211 aaKnown RBP18.41■□□□□ 0.54
SFSWAP-205ENST00000537164 WEE1P30291 646 aa18.41■□□□□ 0.54
SFSWAP-205ENST00000537164 TEAD2Q15562 447 aa18.41■□□□□ 0.54
SFSWAP-205ENST00000537164 CWF19L1Q69YN2 538 aaKnown RBP18.41■□□□□ 0.54
SFSWAP-205ENST00000537164 TANGO2Q6ICL3 276 aa18.41■□□□□ 0.54
SFSWAP-205ENST00000537164 INTS8Q75QN2 995 aaKnown RBP18.41■□□□□ 0.54
SFSWAP-205ENST00000537164 SIX5Q8N196 739 aa18.41■□□□□ 0.54
SFSWAP-205ENST00000537164 ST13P5Q8NFI4 369 aaPredicted RBP18.41■□□□□ 0.54
SFSWAP-205ENST00000537164 MMS19Q96T76 1030 aa18.41■□□□□ 0.54
SFSWAP-205ENST00000537164 KXD1Q9BQD3 176 aa18.41■□□□□ 0.54
SFSWAP-205ENST00000537164 LPIN3Q9BQK8 851 aa18.41■□□□□ 0.54
SFSWAP-205ENST00000537164 MKNK1Q9BUB5 465 aa18.41■□□□□ 0.54
SFSWAP-205ENST00000537164 IL21Q9HBE4 155 aa18.41■□□□□ 0.54
SFSWAP-205ENST00000537164 ZFP14Q9HCL3 533 aa18.41■□□□□ 0.54
SFSWAP-205ENST00000537164 HOOK1Q9UJC3 728 aaKnown RBP18.41■□□□□ 0.54
SFSWAP-205ENST00000537164 PCDHA5Q9Y5H7 936 aa18.41■□□□□ 0.54
SFSWAP-205ENST00000537164 CACNA1HO95180 2353 aa18.41■□□□□ 0.54
SFSWAP-205ENST00000537164 MYBPHLA2RUH7 354 aa18.4■□□□□ 0.54
SFSWAP-205ENST00000537164 HCRTO43612 131 aa18.4■□□□□ 0.54
SFSWAP-205ENST00000537164 SMC2O95347 1197 aa18.4■□□□□ 0.54
SFSWAP-205ENST00000537164 HMGA1P17096 107 aaKnown RBP18.4■□□□□ 0.54
SFSWAP-205ENST00000537164 GJA1P17302 382 aa18.4■□□□□ 0.54
SFSWAP-205ENST00000537164 AOC1P19801 751 aa18.4■□□□□ 0.54
SFSWAP-205ENST00000537164 MAGEA11P43364 429 aa18.4■□□□□ 0.54
SFSWAP-205ENST00000537164 ADAM9Q13443 819 aa18.4■□□□□ 0.54
SFSWAP-205ENST00000537164 NCOA4Q13772 614 aa18.4■□□□□ 0.54
SFSWAP-205ENST00000537164 MAPRE1Q15691 268 aaKnown RBP18.4■□□□□ 0.54
SFSWAP-205ENST00000537164 IER5LQ5T953 404 aa18.4■□□□□ 0.54
SFSWAP-205ENST00000537164 CEP135Q66GS9 1140 aa18.4■□□□□ 0.54
SFSWAP-205ENST00000537164 PHLDB3Q6NSJ2 640 aa18.4■□□□□ 0.54
SFSWAP-205ENST00000537164 SMYD4Q8IYR2 804 aaPredicted RBP18.4■□□□□ 0.54
SFSWAP-205ENST00000537164 SYT15Q9BQS2 421 aa18.4■□□□□ 0.54
SFSWAP-205ENST00000537164 MRPL45Q9BRJ2 306 aaKnown RBP18.4■□□□□ 0.54
SFSWAP-205ENST00000537164 PI4K2AQ9BTU6 479 aa18.4■□□□□ 0.54
SFSWAP-205ENST00000537164 PLA2G2FQ9BZM2 168 aa18.4■□□□□ 0.54
SFSWAP-205ENST00000537164 MFSD1Q9H3U5 465 aa18.4■□□□□ 0.54
SFSWAP-205ENST00000537164 CRTAC1Q9NQ79 661 aa18.4■□□□□ 0.54
SFSWAP-205ENST00000537164 NME7Q9Y5B8 376 aa18.4■□□□□ 0.54
SFSWAP-205ENST00000537164 COL4A2P08572 1712 aa18.4■□□□□ 0.54
SFSWAP-205ENST00000537164 PHACTR2O75167 634 aa18.39■□□□□ 0.53
SFSWAP-205ENST00000537164 ATP2C2O75185 946 aa18.39■□□□□ 0.53
SFSWAP-205ENST00000537164 CSH1P0DML2 217 aa18.39■□□□□ 0.53
SFSWAP-205ENST00000537164 CSH2P0DML3 217 aa18.39■□□□□ 0.53
SFSWAP-205ENST00000537164 CYP2F1P24903 491 aa18.39■□□□□ 0.53
SFSWAP-205ENST00000537164 GABRR2P28476 465 aa18.39■□□□□ 0.53
SFSWAP-205ENST00000537164 PSMC2P35998 433 aaKnown RBP18.39■□□□□ 0.53
SFSWAP-205ENST00000537164 GNL1P36915 607 aaPredicted RBP18.39■□□□□ 0.53
SFSWAP-205ENST00000537164 PLA2G5P39877 138 aa18.39■□□□□ 0.53
SFSWAP-205ENST00000537164 PRCPP42785 496 aa18.39■□□□□ 0.53
SFSWAP-205ENST00000537164 VAMP7P51809 220 aa18.39■□□□□ 0.53
SFSWAP-205ENST00000537164 RPL10AP62906 217 aaKnown RBP18.39■□□□□ 0.53
SFSWAP-205ENST00000537164 TNNC1P63316 161 aa18.39■□□□□ 0.53
SFSWAP-205ENST00000537164 PFKPQ01813 784 aa18.39■□□□□ 0.53
SFSWAP-205ENST00000537164 BIRC3Q13489 604 aa18.39■□□□□ 0.53
SFSWAP-205ENST00000537164 CCDC142Q17RM4 750 aa18.39■□□□□ 0.53
SFSWAP-205ENST00000537164 C4orf50Q6ZRC1 276 aa18.39■□□□□ 0.53
SFSWAP-205ENST00000537164 SV2AQ7L0J3 742 aa18.39■□□□□ 0.53
SFSWAP-205ENST00000537164 ZC3H3Q8IXZ2 948 aaKnown RBP18.39■□□□□ 0.53
SFSWAP-205ENST00000537164 TMEM105Q8N8V8 129 aa18.39■□□□□ 0.53
SFSWAP-205ENST00000537164 ZSCAN18Q8TBC5 510 aaPredicted RBP18.39■□□□□ 0.53
SFSWAP-205ENST00000537164 MYCBPAPQ8TBZ2 947 aa18.39■□□□□ 0.53
SFSWAP-205ENST00000537164 TAF4BQ92750 862 aa18.39■□□□□ 0.53
SFSWAP-205ENST00000537164 SMARCE1Q969G3 411 aa18.39■□□□□ 0.53
SFSWAP-205ENST00000537164 E2F7Q96AV8 911 aa18.39■□□□□ 0.53
SFSWAP-205ENST00000537164 TRMT2BQ96GJ1 504 aaKnown RBP18.39■□□□□ 0.53
SFSWAP-205ENST00000537164 MYRFLQ96LU7 910 aa18.39■□□□□ 0.53
SFSWAP-205ENST00000537164 CEP295NLQ96MC4 621 aa18.39■□□□□ 0.53
SFSWAP-205ENST00000537164 ARHGEF3Q9NR81 526 aa18.39■□□□□ 0.53
SFSWAP-205ENST00000537164 ZMYM5Q9UJ78 669 aa18.39■□□□□ 0.53
SFSWAP-205ENST00000537164 SOBPA7XYQ1 873 aa18.38■□□□□ 0.53
SFSWAP-205ENST00000537164 CDC25CP30307 473 aa18.38■□□□□ 0.53
SFSWAP-205ENST00000537164 CDR1P51861 262 aa18.38■□□□□ 0.53
SFSWAP-205ENST00000537164 STARD6P59095 220 aa18.38■□□□□ 0.53
SFSWAP-205ENST00000537164 SGSM1Q2NKQ1 1148 aa18.38■□□□□ 0.53
SFSWAP-205ENST00000537164 ZNF699Q32M78 642 aa18.38■□□□□ 0.53
SFSWAP-205ENST00000537164 VSTM1Q6UX27 236 aa18.38■□□□□ 0.53
SFSWAP-205ENST00000537164 TMEM150AQ86TG1 271 aa18.38■□□□□ 0.53
SFSWAP-205ENST00000537164 SPATA2LQ8IUW3 424 aaPredicted RBP18.38■□□□□ 0.53
SFSWAP-205ENST00000537164 FAM186BQ8IYM0 893 aa18.38■□□□□ 0.53
SFSWAP-205ENST00000537164 FAM200AQ8TCP9 573 aa18.38■□□□□ 0.53
SFSWAP-205ENST00000537164 GIPC2Q8TF65 315 aa18.38■□□□□ 0.53
SFSWAP-205ENST00000537164 DEPDC1BQ8WUY9 529 aa18.38■□□□□ 0.53
SFSWAP-205ENST00000537164 DDX23Q9BUQ8 820 aaKnown RBP18.38■□□□□ 0.53
SFSWAP-205ENST00000537164 ATXN3LQ9H3M9 355 aa18.38■□□□□ 0.53
SFSWAP-205ENST00000537164 TRPV5Q9NQA5 729 aa18.38■□□□□ 0.53
SFSWAP-205ENST00000537164 CHMP5Q9NZZ3 219 aa18.38■□□□□ 0.53
SFSWAP-205ENST00000537164 KIF26AQ9ULI4 1882 aaPredicted RBP18.37■□□□□ 0.53
SFSWAP-205ENST00000537164 ANAPC1Q9H1A4 1944 aa18.37■□□□□ 0.53
SFSWAP-205ENST00000537164 VPS13AQ96RL7 3174 aa18.37■□□□□ 0.53
SFSWAP-205ENST00000537164 KINO60870 393 aaKnown RBP18.37■□□□□ 0.53
SFSWAP-205ENST00000537164 GADD45BO75293 160 aaPredicted RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms