RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 RHPN2Q8IUC4 686 aa6.87□□□□□ -1.31
SDC2-208ENST00000523877 TRMT44Q8IYL2 757 aaKnown RBP6.87□□□□□ -1.31
SDC2-208ENST00000523877 TCAIMQ8N3R3 496 aa6.87□□□□□ -1.31
SDC2-208ENST00000523877 AFAP1L2Q8N4X5 818 aa6.87□□□□□ -1.31
SDC2-208ENST00000523877 OR10Z1Q8NGY1 313 aa6.87□□□□□ -1.31
SDC2-208ENST00000523877 SCFD2Q8WU76 684 aa6.87□□□□□ -1.31
SDC2-208ENST00000523877 ASZ1Q8WWH4 475 aa6.87□□□□□ -1.31
SDC2-208ENST00000523877 GATA6Q92908 595 aa6.87□□□□□ -1.31
SDC2-208ENST00000523877 NINJ1Q92982 152 aa6.87□□□□□ -1.31
SDC2-208ENST00000523877 ZNF775Q96BV0 537 aaPredicted RBP6.87□□□□□ -1.31
SDC2-208ENST00000523877 EGLN2Q96KS0 407 aa6.87□□□□□ -1.31
SDC2-208ENST00000523877 CEP170P1Q96L14 293 aa6.87□□□□□ -1.31
SDC2-208ENST00000523877 TUBGCP5Q96RT8 1024 aa6.87□□□□□ -1.31
SDC2-208ENST00000523877 CCDC28BQ9BUN5 200 aa6.87□□□□□ -1.31
SDC2-208ENST00000523877 MIS12Q9H081 205 aa6.87□□□□□ -1.31
SDC2-208ENST00000523877 ZCWPW1Q9H0M4 648 aa6.87□□□□□ -1.31
SDC2-208ENST00000523877 SNX25Q9H3E2 840 aa6.87□□□□□ -1.31
SDC2-208ENST00000523877 TMEM134Q9H6X4 195 aa6.87□□□□□ -1.31
SDC2-208ENST00000523877 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.87□□□□□ -1.31
SDC2-208ENST00000523877 OLA1Q9NTK5 396 aaKnown RBP6.87□□□□□ -1.31
SDC2-208ENST00000523877 FAM217BQ9NTX9 383 aaPredicted RBP6.87□□□□□ -1.31
SDC2-208ENST00000523877 NUDT15Q9NV35 164 aa6.87□□□□□ -1.31
SDC2-208ENST00000523877 PCMTD2Q9NV79 361 aa6.87□□□□□ -1.31
SDC2-208ENST00000523877 ARHGEF38Q9NXL2 777 aa6.87□□□□□ -1.31
SDC2-208ENST00000523877 TAS2R3Q9NYW6 316 aa6.87□□□□□ -1.31
SDC2-208ENST00000523877 ACTR3BQ9P1U1 418 aa6.87□□□□□ -1.31
SDC2-208ENST00000523877 DBF4Q9UBU7 674 aaPredicted RBP6.87□□□□□ -1.31
SDC2-208ENST00000523877 VAV3Q9UKW4 847 aa6.87□□□□□ -1.31
SDC2-208ENST00000523877 STX8Q9UNK0 236 aa6.87□□□□□ -1.31
SDC2-208ENST00000523877 TRIM33Q9UPN9 1127 aa6.87□□□□□ -1.31
SDC2-208ENST00000523877 GAB2Q9UQC2 676 aa6.87□□□□□ -1.31
SDC2-208ENST00000523877 INVSQ9Y283 1065 aa6.87□□□□□ -1.31
SDC2-208ENST00000523877 USP20Q9Y2K6 914 aa6.87□□□□□ -1.31
SDC2-208ENST00000523877 LRCH1Q9Y2L9 728 aa6.87□□□□□ -1.31
SDC2-208ENST00000523877 MSRB2Q9Y3D2 182 aa6.87□□□□□ -1.31
SDC2-208ENST00000523877 ASB3Q9Y575 518 aa6.87□□□□□ -1.31
SDC2-208ENST00000523877 PCDHGA1Q9Y5H4 931 aa6.87□□□□□ -1.31
SDC2-208ENST00000523877 PCDHA5Q9Y5H7 936 aa6.87□□□□□ -1.31
SDC2-208ENST00000523877 GPC6Q9Y625 555 aaPredicted RBP6.87□□□□□ -1.31
SDC2-208ENST00000523877 FAM169AQ9Y6X4 670 aa6.87□□□□□ -1.31
SDC2-208ENST00000523877 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.86□□□□□ -1.31
SDC2-208ENST00000523877 LOC102724428A0A0B4J2F2 783 aa6.86□□□□□ -1.31
SDC2-208ENST00000523877 PMS2P1A4D2B8 440 aa6.86□□□□□ -1.31
SDC2-208ENST00000523877 DCDC2CA8MYV0 355 aa6.86□□□□□ -1.31
SDC2-208ENST00000523877 TMEM114B3SHH9 223 aa6.86□□□□□ -1.31
SDC2-208ENST00000523877 B8ZZF3 427 aa6.86□□□□□ -1.31
SDC2-208ENST00000523877 F8W8V4 182 aa6.86□□□□□ -1.31
SDC2-208ENST00000523877 M0R2N6 131 aa6.86□□□□□ -1.31
SDC2-208ENST00000523877 NPC1O15118 1278 aa6.86□□□□□ -1.31
SDC2-208ENST00000523877 PPM1BO75688 479 aa6.86□□□□□ -1.31
SDC2-208ENST00000523877 DGAT1O75907 488 aa6.86□□□□□ -1.31
SDC2-208ENST00000523877 ASS1P00966 412 aaKnown RBP6.86□□□□□ -1.31
SDC2-208ENST00000523877 CYP1A1P04798 512 aaPredicted RBP6.86□□□□□ -1.31
SDC2-208ENST00000523877 NFICP08651 508 aa6.86□□□□□ -1.31
SDC2-208ENST00000523877 RPS17P08708 135 aaKnown RBP6.86□□□□□ -1.31
SDC2-208ENST00000523877 HMOX1P09601 288 aa6.86□□□□□ -1.31
SDC2-208ENST00000523877 RARBP10826 455 aa6.86□□□□□ -1.31
SDC2-208ENST00000523877 KRT5P13647 590 aa6.86□□□□□ -1.31
SDC2-208ENST00000523877 CHN1P15882 459 aa6.86□□□□□ -1.31
SDC2-208ENST00000523877 GUCY1A2P33402 732 aa6.86□□□□□ -1.31
SDC2-208ENST00000523877 NUP62P37198 522 aaPredicted RBP6.86□□□□□ -1.31
SDC2-208ENST00000523877 POU3F4P49335 361 aa6.86□□□□□ -1.31
SDC2-208ENST00000523877 TMED10P49755 219 aaKnown RBP6.86□□□□□ -1.31
SDC2-208ENST00000523877 FXR1P51114 621 aaKnown RBP eCLIP6.86□□□□□ -1.31
SDC2-208ENST00000523877 ADCY7P51828 1080 aa6.86□□□□□ -1.31
SDC2-208ENST00000523877 CASP5P51878 434 aa6.86□□□□□ -1.31
SDC2-208ENST00000523877 ATP12AP54707 1039 aa6.86□□□□□ -1.31
SDC2-208ENST00000523877 SIK1P57059 783 aa6.86□□□□□ -1.31
SDC2-208ENST00000523877 RNF4P78317 190 aa6.86□□□□□ -1.31
SDC2-208ENST00000523877 ARF5P84085 180 aa6.86□□□□□ -1.31
SDC2-208ENST00000523877 CTDSPL2Q05D32 466 aa6.86□□□□□ -1.31
SDC2-208ENST00000523877 CDC20Q12834 499 aa6.86□□□□□ -1.31
SDC2-208ENST00000523877 BMPR2Q13873 1038 aa6.86□□□□□ -1.31
SDC2-208ENST00000523877 PPP2R5EQ16537 467 aa6.86□□□□□ -1.31
SDC2-208ENST00000523877 TMEM266Q2M3C6 531 aa6.86□□□□□ -1.31
SDC2-208ENST00000523877 ABCB5Q2M3G0 1257 aa6.86□□□□□ -1.31
SDC2-208ENST00000523877 ZNF674Q2M3X9 581 aa6.86□□□□□ -1.31
SDC2-208ENST00000523877 FSCBQ5H9T9 825 aa6.86□□□□□ -1.31
SDC2-208ENST00000523877 HEATR6Q6AI08 1181 aaKnown RBP6.86□□□□□ -1.31
SDC2-208ENST00000523877 CENPPQ6IPU0 288 aa6.86□□□□□ -1.31
SDC2-208ENST00000523877 CRELD2Q6UXH1 353 aaPredicted RBP6.86□□□□□ -1.31
SDC2-208ENST00000523877 TMC5Q6UXY8 1006 aa6.86□□□□□ -1.31
SDC2-208ENST00000523877 PTCHD4Q6ZW05 846 aa6.86□□□□□ -1.31
SDC2-208ENST00000523877 R3HCC1LQ7Z5L2 792 aaKnown RBP6.86□□□□□ -1.31
SDC2-208ENST00000523877 SH3RF1Q7Z6J0 888 aa6.86□□□□□ -1.31
SDC2-208ENST00000523877 RNF180Q86T96 592 aa6.86□□□□□ -1.31
SDC2-208ENST00000523877 FAM160B2Q86V87 743 aa6.86□□□□□ -1.31
SDC2-208ENST00000523877 MICU3Q86XE3 530 aa6.86□□□□□ -1.31
SDC2-208ENST00000523877 CCNJLQ8IV13 435 aa6.86□□□□□ -1.31
SDC2-208ENST00000523877 MAML2Q8IZL2 1156 aaPredicted RBP6.86□□□□□ -1.31
SDC2-208ENST00000523877 ZNF321PQ8N8H1 164 aa6.86□□□□□ -1.31
SDC2-208ENST00000523877 CFAP61Q8NHU2 1237 aa6.86□□□□□ -1.31
SDC2-208ENST00000523877 NEDD1Q8NHV4 660 aa6.86□□□□□ -1.31
SDC2-208ENST00000523877 FANK1Q8TC84 345 aa6.86□□□□□ -1.31
SDC2-208ENST00000523877 ZNF507Q8TCN5 953 aa6.86□□□□□ -1.31
SDC2-208ENST00000523877 TMIGD2Q96BF3 282 aa6.86□□□□□ -1.31
SDC2-208ENST00000523877 SLC10A4Q96EP9 437 aa6.86□□□□□ -1.31
SDC2-208ENST00000523877 NUP88Q99567 741 aaPredicted RBP6.86□□□□□ -1.31
SDC2-208ENST00000523877 RUSC1Q9BVN2 902 aa6.86□□□□□ -1.31
SDC2-208ENST00000523877 PINK1Q9BXM7 581 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms