RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 SPTLC1O15269 473 aa17.82■□□□□ 0.44
SREK1-212ENST00000522912 OAS2P29728 719 aaKnown RBP17.82■□□□□ 0.44
SREK1-212ENST00000522912 CHRNA3P32297 505 aa17.82■□□□□ 0.44
SREK1-212ENST00000522912 PTGIRP43119 386 aa17.82■□□□□ 0.44
SREK1-212ENST00000522912 PSMC1P62191 440 aaKnown RBP17.82■□□□□ 0.44
SREK1-212ENST00000522912 DR1Q01658 176 aa17.82■□□□□ 0.44
SREK1-212ENST00000522912 NNTQ13423 1086 aa17.82■□□□□ 0.44
SREK1-212ENST00000522912 SOWAHAQ2M3V2 549 aa17.82■□□□□ 0.44
SREK1-212ENST00000522912 CD99L2Q8TCZ2 262 aa17.82■□□□□ 0.44
SREK1-212ENST00000522912 TSPAN18Q96SJ8 248 aa17.82■□□□□ 0.44
SREK1-212ENST00000522912 PLVAPQ9BX97 442 aa17.82■□□□□ 0.44
SREK1-212ENST00000522912 SIGLEC16A6NMB1 481 aa17.81■□□□□ 0.44
SREK1-212ENST00000522912 PTGESO14684 152 aa17.81■□□□□ 0.44
SREK1-212ENST00000522912 DAPK3O43293 454 aa17.81■□□□□ 0.44
SREK1-212ENST00000522912 TRPA1O75762 1119 aa17.81■□□□□ 0.44
SREK1-212ENST00000522912 PFKMP08237 780 aa17.81■□□□□ 0.44
SREK1-212ENST00000522912 CST5P28325 142 aaPredicted RBP17.81■□□□□ 0.44
SREK1-212ENST00000522912 RFC1P35251 1148 aaPredicted RBP17.81■□□□□ 0.44
SREK1-212ENST00000522912 SSR1P43307 286 aaKnown RBP17.81■□□□□ 0.44
SREK1-212ENST00000522912 GABRB2P47870 512 aa17.81■□□□□ 0.44
SREK1-212ENST00000522912 GSCP56915 257 aaPredicted RBP17.81■□□□□ 0.44
SREK1-212ENST00000522912 NFX1Q12986 1120 aaKnown RBP17.81■□□□□ 0.44
SREK1-212ENST00000522912 PDCLQ13371 301 aa17.81■□□□□ 0.44
SREK1-212ENST00000522912 CUL1Q13616 776 aa17.81■□□□□ 0.44
SREK1-212ENST00000522912 DHX34Q14147 1143 aaKnown RBP17.81■□□□□ 0.44
SREK1-212ENST00000522912 FBXO47Q5MNV8 452 aa17.81■□□□□ 0.44
SREK1-212ENST00000522912 ACOT1Q86TX2 421 aa17.81■□□□□ 0.44
SREK1-212ENST00000522912 RPAINQ86UA6 219 aa17.81■□□□□ 0.44
SREK1-212ENST00000522912 REM2Q8IYK8 340 aaPredicted RBP17.81■□□□□ 0.44
SREK1-212ENST00000522912 KATNAL2Q8IYT4 538 aa17.81■□□□□ 0.44
SREK1-212ENST00000522912 EIF1ADQ8N9N8 165 aaKnown RBP17.81■□□□□ 0.44
SREK1-212ENST00000522912 TSEN2Q8NCE0 465 aaKnown RBP17.81■□□□□ 0.44
SREK1-212ENST00000522912 JOSD2Q8TAC2 188 aa17.81■□□□□ 0.44
SREK1-212ENST00000522912 TSPAN16Q9UKR8 245 aa17.81■□□□□ 0.44
SREK1-212ENST00000522912 MTUS1Q9ULD2 1270 aa17.81■□□□□ 0.44
SREK1-212ENST00000522912 HTTP42858 3142 aa17.81■□□□□ 0.44
SREK1-212ENST00000522912 MEIS3P2A8K0S8 358 aa17.81■□□□□ 0.44
SREK1-212ENST00000522912 ATF7P17544 494 aaPredicted RBP17.81■□□□□ 0.44
SREK1-212ENST00000522912 GJC1P36383 396 aa17.81■□□□□ 0.44
SREK1-212ENST00000522912 ZNF268Q14587 947 aaPredicted RBP17.81■□□□□ 0.44
SREK1-212ENST00000522912 ATP13A4Q4VNC1 1196 aa17.81■□□□□ 0.44
SREK1-212ENST00000522912 PPP1R26Q5T8A7 1209 aaPredicted RBP17.81■□□□□ 0.44
SREK1-212ENST00000522912 NEUROG2Q9H2A3 272 aa17.81■□□□□ 0.44
SREK1-212ENST00000522912 PCYOX1Q9UHG3 505 aa17.81■□□□□ 0.44
SREK1-212ENST00000522912 FAM187AA6NFU0 413 aa17.8■□□□□ 0.44
SREK1-212ENST00000522912 XPOTO43592 962 aaKnown RBP17.8■□□□□ 0.44
SREK1-212ENST00000522912 HCRTO43612 131 aa17.8■□□□□ 0.44
SREK1-212ENST00000522912 KRT3P12035 628 aa17.8■□□□□ 0.44
SREK1-212ENST00000522912 PIGHQ14442 188 aaPredicted RBP17.8■□□□□ 0.44
SREK1-212ENST00000522912 HLTFQ14527 1009 aaKnown RBP eCLIP17.8■□□□□ 0.443e-7■□□□□ 8.9
SREK1-212ENST00000522912 PTGISQ16647 500 aa17.8■□□□□ 0.44
SREK1-212ENST00000522912 MAP3K21Q5TCX8 1036 aa17.8■□□□□ 0.44
SREK1-212ENST00000522912 ANKS1BQ7Z6G8 1248 aa17.8■□□□□ 0.44
SREK1-212ENST00000522912 JAMLQ86YT9 394 aa17.8■□□□□ 0.44
SREK1-212ENST00000522912 NIPA2Q8N8Q9 360 aa17.8■□□□□ 0.44
SREK1-212ENST00000522912 C12orf50Q8NA57 414 aaPredicted RBP17.8■□□□□ 0.44
SREK1-212ENST00000522912 ZFP42Q96MM3 310 aa17.8■□□□□ 0.44
SREK1-212ENST00000522912 LPIN3Q9BQK8 851 aa17.8■□□□□ 0.44
SREK1-212ENST00000522912 CFHR5Q9BXR6 569 aa17.8■□□□□ 0.44
SREK1-212ENST00000522912 DPH5Q9H2P9 285 aa17.8■□□□□ 0.44
SREK1-212ENST00000522912 SYNCQ9H7C4 482 aa17.8■□□□□ 0.44
SREK1-212ENST00000522912 AGO3Q9H9G7 860 aaKnown RBP17.8■□□□□ 0.44
SREK1-212ENST00000522912 GDAP2Q9NXN4 497 aa17.8■□□□□ 0.44
SREK1-212ENST00000522912 WDR35Q9P2L0 1181 aa17.8■□□□□ 0.44
SREK1-212ENST00000522912 UTP11Q9Y3A2 253 aaKnown RBP17.8■□□□□ 0.44
SREK1-212ENST00000522912 KPNA7A9QM74 516 aa17.79■□□□□ 0.44
SREK1-212ENST00000522912 FGFR1P11362 822 aa17.79■□□□□ 0.44
SREK1-212ENST00000522912 COILP38432 576 aaPredicted RBP17.79■□□□□ 0.44
SREK1-212ENST00000522912 AARSP49588 968 aaKnown RBP eCLIP17.79■□□□□ 0.44
SREK1-212ENST00000522912 GOLGA7BQ2TAP0 167 aa17.79■□□□□ 0.44
SREK1-212ENST00000522912 DUPD1Q68J44 220 aa17.79■□□□□ 0.44
SREK1-212ENST00000522912 CCDC137Q6PK04 289 aaKnown RBP17.79■□□□□ 0.44
SREK1-212ENST00000522912 OR6B3Q8NGW1 331 aa17.79■□□□□ 0.44
SREK1-212ENST00000522912 EXD1Q8NHP7 514 aa17.79■□□□□ 0.44
SREK1-212ENST00000522912 KBTBD7Q8WVZ9 684 aa17.79■□□□□ 0.44
SREK1-212ENST00000522912 MCRS1Q96EZ8 462 aa17.79■□□□□ 0.44
SREK1-212ENST00000522912 ZNF560Q96MR9 790 aa17.79■□□□□ 0.44
SREK1-212ENST00000522912 PPP1R10Q96QC0 940 aaKnown RBP17.79■□□□□ 0.44
SREK1-212ENST00000522912 ERP44Q9BS26 406 aa17.79■□□□□ 0.44
SREK1-212ENST00000522912 DPEP3Q9H4B8 488 aa17.79■□□□□ 0.44
SREK1-212ENST00000522912 METTL5Q9NRN9 209 aaKnown RBP17.79■□□□□ 0.44
SREK1-212ENST00000522912 FAM105AQ9NUU6 356 aa17.79■□□□□ 0.44
SREK1-212ENST00000522912 LCMT1Q9UIC8 334 aa17.79■□□□□ 0.44
SREK1-212ENST00000522912 RALAP11233 206 aa17.79■□□□□ 0.44
SREK1-212ENST00000522912 THPOP40225 353 aa17.79■□□□□ 0.44
SREK1-212ENST00000522912 PKDCCQ504Y2 493 aa17.79■□□□□ 0.44
SREK1-212ENST00000522912 ZNF618Q5T7W0 954 aa17.79■□□□□ 0.44
SREK1-212ENST00000522912 TXNRD3NBQ6F5E7 133 aa17.79■□□□□ 0.44
SREK1-212ENST00000522912 LIMS2Q7Z4I7 341 aa17.79■□□□□ 0.44
SREK1-212ENST00000522912 UNC93AQ86WB7 457 aa17.79■□□□□ 0.44
SREK1-212ENST00000522912 TTC30AQ86WT1 665 aa17.79■□□□□ 0.44
SREK1-212ENST00000522912 CCDC50Q8IVM0 306 aa17.79■□□□□ 0.44
SREK1-212ENST00000522912 C1orf54Q8WWF1 131 aa17.79■□□□□ 0.44
SREK1-212ENST00000522912 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.79■□□□□ 0.44
SREK1-212ENST00000522912 TRIM31Q9BZY9 425 aa17.79■□□□□ 0.44
SREK1-212ENST00000522912 RAB17Q9H0T7 212 aa17.79■□□□□ 0.44
SREK1-212ENST00000522912 ACBD3Q9H3P7 528 aa17.79■□□□□ 0.44
SREK1-212ENST00000522912 LRRC19Q9H756 370 aa17.79■□□□□ 0.44
SREK1-212ENST00000522912 FAM49BQ9NUQ9 324 aa17.79■□□□□ 0.44
SREK1-212ENST00000522912 KLHL11Q9NVR0 708 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms