RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 CACNB2Q08289 660 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P23-201ENST00000518743 CR1LQ2VPA4 569 aa5.53□□□□□ -1.52
HMGB1P23-201ENST00000518743 TIGD5Q53EQ6 642 aa5.53□□□□□ -1.52
HMGB1P23-201ENST00000518743 KANK2Q63ZY3 851 aa5.53□□□□□ -1.52
HMGB1P23-201ENST00000518743 PGBD2Q6P3X8 592 aa5.53□□□□□ -1.52
HMGB1P23-201ENST00000518743 GADL1Q6ZQY3 521 aa5.53□□□□□ -1.52
HMGB1P23-201ENST00000518743 NKAPQ8N5F7 415 aaKnown RBP5.53□□□□□ -1.52
HMGB1P23-201ENST00000518743 AGBL3Q8NEM8 1001 aa5.53□□□□□ -1.52
HMGB1P23-201ENST00000518743 BRIX1Q8TDN6 353 aaKnown RBP5.53□□□□□ -1.52
HMGB1P23-201ENST00000518743 HERVK_113Q902F9 699 aa5.53□□□□□ -1.52
HMGB1P23-201ENST00000518743 BADQ92934 168 aa5.53□□□□□ -1.52
HMGB1P23-201ENST00000518743 GFM2Q969S9 779 aaKnown RBP5.53□□□□□ -1.52
HMGB1P23-201ENST00000518743 SLC35A4Q96G79 324 aa5.53□□□□□ -1.52
HMGB1P23-201ENST00000518743 CLPTM1LQ96KA5 538 aa5.53□□□□□ -1.52
HMGB1P23-201ENST00000518743 WDR92Q96MX6 357 aa5.53□□□□□ -1.52
HMGB1P23-201ENST00000518743 EIF2AQ9BY44 585 aaKnown RBP5.53□□□□□ -1.52
HMGB1P23-201ENST00000518743 C22orf23Q9BZE7 217 aa5.53□□□□□ -1.52
HMGB1P23-201ENST00000518743 AGO4Q9HCK5 861 aaKnown RBP5.53□□□□□ -1.52
HMGB1P23-201ENST00000518743 SERHLQ9NQF3 203 aa5.53□□□□□ -1.52
HMGB1P23-201ENST00000518743 PRDM7Q9NQW5 492 aa5.53□□□□□ -1.52
HMGB1P23-201ENST00000518743 PNPOQ9NVS9 261 aa5.53□□□□□ -1.52
HMGB1P23-201ENST00000518743 C19orf73Q9NVV2 129 aa5.53□□□□□ -1.52
HMGB1P23-201ENST00000518743 PIH1D1Q9NWS0 290 aaKnown RBP5.53□□□□□ -1.52
HMGB1P23-201ENST00000518743 CTNND2Q9UQB3 1225 aa5.53□□□□□ -1.52
HMGB1P23-201ENST00000518743 ATRNL1Q5VV63 1379 aa5.53□□□□□ -1.52
HMGB1P23-201ENST00000518743 MAST2Q6P0Q8 1798 aa5.52□□□□□ -1.53
HMGB1P23-201ENST00000518743 ABCC4O15439 1325 aa5.52□□□□□ -1.53
HMGB1P23-201ENST00000518743 EP300Q09472 2414 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P23-201ENST00000518743 A0A0G2JNJ9 132 aa5.52□□□□□ -1.53
HMGB1P23-201ENST00000518743 SCO2A0A1W2PP80 73 aa5.52□□□□□ -1.53
HMGB1P23-201ENST00000518743 KIAA1324LA8MWY0 1029 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P23-201ENST00000518743 TEX33O43247 280 aa5.52□□□□□ -1.53
HMGB1P23-201ENST00000518743 DCXO43602 365 aa5.52□□□□□ -1.53
HMGB1P23-201ENST00000518743 NBNO60934 754 aa5.52□□□□□ -1.53
HMGB1P23-201ENST00000518743 IL18RAPO95256 599 aa5.52□□□□□ -1.53
HMGB1P23-201ENST00000518743 PFKLP17858 780 aa5.52□□□□□ -1.53
HMGB1P23-201ENST00000518743 CTSSP25774 331 aa5.52□□□□□ -1.53
HMGB1P23-201ENST00000518743 STAT5AP42229 794 aa5.52□□□□□ -1.53
HMGB1P23-201ENST00000518743 PIK3CBP42338 1070 aa5.52□□□□□ -1.53
HMGB1P23-201ENST00000518743 TECP42680 631 aa5.52□□□□□ -1.53
HMGB1P23-201ENST00000518743 ERVFC1P60507 584 aa5.52□□□□□ -1.53
HMGB1P23-201ENST00000518743 NKX6-1P78426 367 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P23-201ENST00000518743 PPP3CAQ08209 521 aa5.52□□□□□ -1.53
HMGB1P23-201ENST00000518743 IL10RAQ13651 578 aa5.52□□□□□ -1.53
HMGB1P23-201ENST00000518743 WDR72Q3MJ13 1102 aa5.52□□□□□ -1.53
HMGB1P23-201ENST00000518743 APOA5Q6Q788 366 aa5.52□□□□□ -1.53
HMGB1P23-201ENST00000518743 LRSAM1Q6UWE0 723 aa5.52□□□□□ -1.53
HMGB1P23-201ENST00000518743 OTOP2Q7RTS6 562 aa5.52□□□□□ -1.53
HMGB1P23-201ENST00000518743 PROSER1Q86XN7 944 aa5.52□□□□□ -1.53
HMGB1P23-201ENST00000518743 FAM129CQ86XR2 697 aa5.52□□□□□ -1.53
HMGB1P23-201ENST00000518743 WFDC3Q8IUB2 231 aa5.52□□□□□ -1.53
HMGB1P23-201ENST00000518743 TP53INP2Q8IXH6 220 aa5.52□□□□□ -1.53
HMGB1P23-201ENST00000518743 SP8Q8IXZ3 490 aa5.52□□□□□ -1.53
HMGB1P23-201ENST00000518743 ZNF480Q8WV37 535 aa5.52□□□□□ -1.53
HMGB1P23-201ENST00000518743 SNX33Q8WV41 574 aa5.52□□□□□ -1.53
HMGB1P23-201ENST00000518743 KAT5Q92993 513 aa5.52□□□□□ -1.53
HMGB1P23-201ENST00000518743 LPPQ93052 612 aa5.52□□□□□ -1.53
HMGB1P23-201ENST00000518743 MSLNLQ96KJ4 702 aa5.52□□□□□ -1.53
HMGB1P23-201ENST00000518743 SAMD11Q96NU1 681 aa5.52□□□□□ -1.53
HMGB1P23-201ENST00000518743 EYA3Q99504 573 aa5.52□□□□□ -1.53
HMGB1P23-201ENST00000518743 TEX13AQ9BXU3 409 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P23-201ENST00000518743 RNF32Q9H0A6 362 aa5.52□□□□□ -1.53
HMGB1P23-201ENST00000518743 BCO1Q9HAY6 547 aa5.52□□□□□ -1.53
HMGB1P23-201ENST00000518743 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.52□□□□□ -1.53
HMGB1P23-201ENST00000518743 KLHL14Q9P2G3 628 aa5.52□□□□□ -1.53
HMGB1P23-201ENST00000518743 Q9UFV3 132 aa5.52□□□□□ -1.53
HMGB1P23-201ENST00000518743 COG5Q9UP83 839 aa5.52□□□□□ -1.53
HMGB1P23-201ENST00000518743 LZTS1Q9Y250 596 aa5.52□□□□□ -1.53
HMGB1P23-201ENST00000518743 ATP11BQ9Y2G3 1177 aa5.52□□□□□ -1.53
HMGB1P23-201ENST00000518743 CEP83Q9Y592 693 aa5.52□□□□□ -1.53
HMGB1P23-201ENST00000518743 OTOFQ9HC10 1997 aa5.52□□□□□ -1.53
HMGB1P23-201ENST00000518743 COL4A6Q14031 1691 aa5.52□□□□□ -1.53
HMGB1P23-201ENST00000518743 WDR87Q6ZQQ6 2873 aa5.52□□□□□ -1.53
HMGB1P23-201ENST00000518743 CEP250Q9BV73 2442 aa5.52□□□□□ -1.53
HMGB1P23-201ENST00000518743 A0A0G2JMZ2 1700 aa5.51□□□□□ -1.53
HMGB1P23-201ENST00000518743 A0A1W2PR48 441 aa5.51□□□□□ -1.53
HMGB1P23-201ENST00000518743 BTBD19C9JJ37 291 aa5.51□□□□□ -1.53
HMGB1P23-201ENST00000518743 TNPO2O14787 897 aaKnown RBP5.51□□□□□ -1.53
HMGB1P23-201ENST00000518743 ADAMTS3O15072 1205 aa5.51□□□□□ -1.53
HMGB1P23-201ENST00000518743 PRAMEF4O60810 478 aa5.51□□□□□ -1.53
HMGB1P23-201ENST00000518743 BBOX1O75936 387 aa5.51□□□□□ -1.53
HMGB1P23-201ENST00000518743 WNT11O96014 354 aa5.51□□□□□ -1.53
HMGB1P23-201ENST00000518743 CETPP11597 493 aa5.51□□□□□ -1.53
HMGB1P23-201ENST00000518743 TYRP14679 529 aa5.51□□□□□ -1.53
HMGB1P23-201ENST00000518743 SPINK2P20155 84 aa5.51□□□□□ -1.53
HMGB1P23-201ENST00000518743 TRHRP34981 398 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P23-201ENST00000518743 PPM1AP35813 382 aa5.51□□□□□ -1.53
HMGB1P23-201ENST00000518743 STT3AP46977 705 aa5.51□□□□□ -1.53
HMGB1P23-201ENST00000518743 SARSP49591 514 aaKnown RBP5.51□□□□□ -1.53
HMGB1P23-201ENST00000518743 IL13RA1P78552 427 aa5.51□□□□□ -1.53
HMGB1P23-201ENST00000518743 BLMHQ13867 455 aa5.51□□□□□ -1.53
HMGB1P23-201ENST00000518743 DAG1Q14118 895 aa5.51□□□□□ -1.53
HMGB1P23-201ENST00000518743 ELF2Q15723 593 aa5.51□□□□□ -1.53
HMGB1P23-201ENST00000518743 CNGA2Q16280 664 aa5.51□□□□□ -1.53
HMGB1P23-201ENST00000518743 MST1LQ2TV78 715 aa5.51□□□□□ -1.53
HMGB1P23-201ENST00000518743 SUPT20HL1Q3ZLR7 823 aa5.51□□□□□ -1.53
HMGB1P23-201ENST00000518743 SLC44A4Q53GD3 710 aa5.51□□□□□ -1.53
HMGB1P23-201ENST00000518743 DACT2Q5SW24 774 aa5.51□□□□□ -1.53
HMGB1P23-201ENST00000518743 TMEM200BQ69YZ2 307 aa5.51□□□□□ -1.53
HMGB1P23-201ENST00000518743 TLDC1Q6P9B6 456 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms