RNA–Protein interactions for RNA: ENST00000514313.1

NUP54-215, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-215ENST00000514313 CYP2C9P11712 490 aa8.65□□□□□ -1.02
NUP54-215ENST00000514313 TPH1P17752 444 aa8.65□□□□□ -1.02
NUP54-215ENST00000514313 GCSHP23434 173 aa8.65□□□□□ -1.02
NUP54-215ENST00000514313 MGAT1P26572 445 aa8.65□□□□□ -1.02
NUP54-215ENST00000514313 KCNC1P48547 511 aa8.65□□□□□ -1.02
NUP54-215ENST00000514313 PTDSS1P48651 473 aaKnown RBP8.65□□□□□ -1.02
NUP54-215ENST00000514313 EPHB4P54760 987 aa8.65□□□□□ -1.02
NUP54-215ENST00000514313 NPY5RQ15761 445 aa8.65□□□□□ -1.02
NUP54-215ENST00000514313 TMTC4Q5T4D3 741 aa8.65□□□□□ -1.02
NUP54-215ENST00000514313 ZNF648Q5T619 568 aaPredicted RBP8.65□□□□□ -1.02
NUP54-215ENST00000514313 TCERG1LQ5VWI1 586 aa8.65□□□□□ -1.02
NUP54-215ENST00000514313 ARL6IP4Q66PJ3 421 aaKnown RBP8.65□□□□□ -1.02
NUP54-215ENST00000514313 RAP1GAP2Q684P5 730 aa8.65□□□□□ -1.02
NUP54-215ENST00000514313 TANGO2Q6ICL3 276 aa8.65□□□□□ -1.02
NUP54-215ENST00000514313 SULT6B1Q6IMI4 303 aa8.65□□□□□ -1.02
NUP54-215ENST00000514313 TAPT1Q6NXT6 567 aa8.65□□□□□ -1.02
NUP54-215ENST00000514313 USP17L6PQ6QN14 398 aa8.65□□□□□ -1.02
NUP54-215ENST00000514313 CLASRPQ8N2M8 674 aaKnown RBP8.65□□□□□ -1.02
NUP54-215ENST00000514313 MARS2Q96GW9 593 aaKnown RBP8.65□□□□□ -1.02
NUP54-215ENST00000514313 TBATAQ96M53 351 aa8.65□□□□□ -1.02
NUP54-215ENST00000514313 GNRHR2Q96P88 292 aa8.65□□□□□ -1.02
NUP54-215ENST00000514313 MOGAT1Q96PD6 335 aa8.65□□□□□ -1.02
NUP54-215ENST00000514313 NEU1Q99519 415 aa8.65□□□□□ -1.02
NUP54-215ENST00000514313 KATNAL1Q9BW62 490 aa8.65□□□□□ -1.02
NUP54-215ENST00000514313 DHX36Q9H2U1 1008 aaKnown RBP8.65□□□□□ -1.02
NUP54-215ENST00000514313 XPNPEP3Q9NQH7 507 aa8.65□□□□□ -1.02
NUP54-215ENST00000514313 PLA2G3Q9NZ20 509 aa8.65□□□□□ -1.02
NUP54-215ENST00000514313 ZMYND8Q9ULU4 1186 aaPredicted RBP8.65□□□□□ -1.02
NUP54-215ENST00000514313 EIF3FO00303 357 aaPredicted RBP8.64□□□□□ -1.03
NUP54-215ENST00000514313 NUAK1O60285 661 aa8.64□□□□□ -1.03
NUP54-215ENST00000514313 MFAP3LO75121 409 aa8.64□□□□□ -1.03
NUP54-215ENST00000514313 PECAM1P16284 738 aaPredicted RBP8.64□□□□□ -1.03
NUP54-215ENST00000514313 PIGFQ07326 219 aa8.64□□□□□ -1.03
NUP54-215ENST00000514313 LMOD3Q0VAK6 560 aa8.64□□□□□ -1.03
NUP54-215ENST00000514313 FSTL1Q12841 308 aa8.64□□□□□ -1.03
NUP54-215ENST00000514313 KCNAB1Q14722 419 aa8.64□□□□□ -1.03
NUP54-215ENST00000514313 IQCB1Q15051 598 aa8.64□□□□□ -1.03
NUP54-215ENST00000514313 SLC4A8Q2Y0W8 1093 aa8.64□□□□□ -1.03
NUP54-215ENST00000514313 ZIK1Q3SY52 487 aaPredicted RBP8.64□□□□□ -1.03
NUP54-215ENST00000514313 JAKMIP3Q5VZ66 844 aa8.64□□□□□ -1.03
NUP54-215ENST00000514313 SLC30A10Q6XR72 485 aa8.64□□□□□ -1.03
NUP54-215ENST00000514313 KCTD20Q7Z5Y7 419 aa8.64□□□□□ -1.03
NUP54-215ENST00000514313 ZNF280BQ86YH2 543 aa8.64□□□□□ -1.03
NUP54-215ENST00000514313 CCDC28AQ8IWP9 274 aa8.64□□□□□ -1.03
NUP54-215ENST00000514313 PSD4Q8NDX1 1056 aa8.64□□□□□ -1.03
NUP54-215ENST00000514313 TRIB1Q96RU8 372 aa8.64□□□□□ -1.03
NUP54-215ENST00000514313 PRPF18Q99633 342 aaKnown RBP8.64□□□□□ -1.03
NUP54-215ENST00000514313 ZSCAN32Q9NX65 697 aa8.64□□□□□ -1.03
NUP54-215ENST00000514313 RRP9O43818 475 aaKnown RBP8.63□□□□□ -1.03
NUP54-215ENST00000514313 ATICP31939 592 aa8.63□□□□□ -1.03
NUP54-215ENST00000514313 ZNF134P52741 427 aa8.63□□□□□ -1.03
NUP54-215ENST00000514313 LILRA4P59901 499 aa8.63□□□□□ -1.03
NUP54-215ENST00000514313 KRT17Q04695 432 aa8.63□□□□□ -1.03
NUP54-215ENST00000514313 MAPKAPK3Q16644 382 aa8.63□□□□□ -1.03
NUP54-215ENST00000514313 INSCQ1MX18 579 aa8.63□□□□□ -1.03
NUP54-215ENST00000514313 METTL24Q5JXM2 366 aa8.63□□□□□ -1.03
NUP54-215ENST00000514313 METRNLQ641Q3 311 aa8.63□□□□□ -1.03
NUP54-215ENST00000514313 TAF2Q6P1X5 1199 aa8.63□□□□□ -1.03
NUP54-215ENST00000514313 BHLHE22Q8NFJ8 381 aaPredicted RBP8.63□□□□□ -1.03
NUP54-215ENST00000514313 IL17REQ8NFR9 667 aa8.63□□□□□ -1.03
NUP54-215ENST00000514313 LRIG1Q96JA1 1093 aa8.63□□□□□ -1.03
NUP54-215ENST00000514313 DNMT3BQ9UBC3 853 aaKnown RBP8.63□□□□□ -1.03
NUP54-215ENST00000514313 DKK4Q9UBT3 224 aa8.63□□□□□ -1.03
NUP54-215ENST00000514313 RRN3P2A6NIE6 340 aa8.62□□□□□ -1.03
NUP54-215ENST00000514313 PYGLP06737 847 aa8.62□□□□□ -1.03
NUP54-215ENST00000514313 ATXN1LP0C7T5 689 aaKnown RBP8.62□□□□□ -1.03
NUP54-215ENST00000514313 MSX2P35548 267 aaPredicted RBP8.62□□□□□ -1.03
NUP54-215ENST00000514313 FOXL1Q12952 345 aa8.62□□□□□ -1.03
NUP54-215ENST00000514313 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.62□□□□□ -1.03
NUP54-215ENST00000514313 CACHD1Q5VU97 1274 aa8.62□□□□□ -1.03
NUP54-215ENST00000514313 MCTP1Q6DN14 999 aa8.62□□□□□ -1.03
NUP54-215ENST00000514313 GATAD2AQ86YP4 633 aa8.62□□□□□ -1.03
NUP54-215ENST00000514313 SMCR8Q8TEV9 937 aaPredicted RBP8.62□□□□□ -1.03
NUP54-215ENST00000514313 EID2BQ96D98 161 aa8.62□□□□□ -1.03
NUP54-215ENST00000514313 ZSCAN31Q96LW9 406 aaPredicted RBP8.62□□□□□ -1.03
NUP54-215ENST00000514313 MPHOSPH9Q99550 1183 aa8.62□□□□□ -1.03
NUP54-215ENST00000514313 FAM167BQ9BTA0 163 aa8.62□□□□□ -1.03
NUP54-215ENST00000514313 HSFX1Q9UBD0 423 aa8.62□□□□□ -1.03
NUP54-215ENST00000514313 GJD2Q9UKL4 321 aa8.62□□□□□ -1.03
NUP54-215ENST00000514313 SHOC2Q9UQ13 582 aa8.62□□□□□ -1.03
NUP54-215ENST00000514313 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.62□□□□□ -1.03
NUP54-215ENST00000514313 CDY1Q9Y6F8 540 aa8.62□□□□□ -1.03
NUP54-215ENST00000514313 CCDC78A2IDD5 438 aa8.61□□□□□ -1.03
NUP54-215ENST00000514313 HMGB1P1B2RPK0 211 aaPredicted RBP8.61□□□□□ -1.03
NUP54-215ENST00000514313 LEFTY2O00292 366 aa8.61□□□□□ -1.03
NUP54-215ENST00000514313 LAMTOR5O43504 91 aa8.61□□□□□ -1.03
NUP54-215ENST00000514313 NPPBP16860 134 aa8.61□□□□□ -1.03
NUP54-215ENST00000514313 MST1P26927 711 aa8.61□□□□□ -1.03
NUP54-215ENST00000514313 RAP1GAPP47736 663 aa8.61□□□□□ -1.03
NUP54-215ENST00000514313 ZNF844Q08AG5 666 aa8.61□□□□□ -1.03
NUP54-215ENST00000514313 SLC5A9Q2M3M2 681 aa8.61□□□□□ -1.03
NUP54-215ENST00000514313 MGAT5BQ3V5L5 792 aa8.61□□□□□ -1.03
NUP54-215ENST00000514313 DCAF17Q5H9S7 520 aaPredicted RBP8.61□□□□□ -1.03
NUP54-215ENST00000514313 C1QL3Q5VWW1 255 aa8.61□□□□□ -1.03
NUP54-215ENST00000514313 SLFN13Q68D06 897 aa8.61□□□□□ -1.03
NUP54-215ENST00000514313 KRT73Q86Y46 540 aa8.61□□□□□ -1.03
NUP54-215ENST00000514313 D2HGDHQ8N465 521 aa8.61□□□□□ -1.03
NUP54-215ENST00000514313 OR1N1Q8NGS0 311 aa8.61□□□□□ -1.03
NUP54-215ENST00000514313 MPP4Q96JB8 637 aa8.61□□□□□ -1.03
NUP54-215ENST00000514313 SLC46A2Q9BY10 475 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms