RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 ZC3H11AO75152 810 aaKnown RBP eCLIP16.86■□□□□ 0.291e-6■■■■■ 33.1
HMGXB3-202ENST00000503427 POLBP06746 335 aa16.86■□□□□ 0.29
HMGXB3-202ENST00000503427 RSPH10BP0C881 870 aa16.86■□□□□ 0.29
HMGXB3-202ENST00000503427 TMEM62Q0P6H9 643 aa16.86■□□□□ 0.29
HMGXB3-202ENST00000503427 PRUNE1Q86TP1 453 aa16.86■□□□□ 0.29
HMGXB3-202ENST00000503427 HPDLQ96IR7 371 aa16.86■□□□□ 0.29
HMGXB3-202ENST00000503427 KLF6Q99612 283 aaPredicted RBP16.86■□□□□ 0.29
HMGXB3-202ENST00000503427 FRMD8P1Q9BZ68 369 aaPredicted RBP16.86■□□□□ 0.29
HMGXB3-202ENST00000503427 GAKO14976 1311 aa16.86■□□□□ 0.29
HMGXB3-202ENST00000503427 STIP1P31948 543 aaKnown RBP16.86■□□□□ 0.29
HMGXB3-202ENST00000503427 LBRQ14739 615 aaKnown RBP16.86■□□□□ 0.29
HMGXB3-202ENST00000503427 EPC2Q52LR7 807 aa16.86■□□□□ 0.29
HMGXB3-202ENST00000503427 BTNL9Q6UXG8 535 aa16.86■□□□□ 0.29
HMGXB3-202ENST00000503427 NOP9Q86U38 636 aaKnown RBP16.86■□□□□ 0.29
HMGXB3-202ENST00000503427 SCFD1Q8WVM8 642 aa16.86■□□□□ 0.29
HMGXB3-202ENST00000503427 GFM2Q969S9 779 aaKnown RBP16.86■□□□□ 0.29
HMGXB3-202ENST00000503427 AGO4Q9HCK5 861 aaKnown RBP16.86■□□□□ 0.29
HMGXB3-202ENST00000503427 AURKCQ9UQB9 309 aa16.86■□□□□ 0.29
HMGXB3-202ENST00000503427 UBR1Q8IWV7 1749 aa16.86■□□□□ 0.29
HMGXB3-202ENST00000503427 GZMAP12544 262 aa16.86■□□□□ 0.29
HMGXB3-202ENST00000503427 KCNA1Q09470 495 aa16.86■□□□□ 0.29
HMGXB3-202ENST00000503427 RBBP7Q16576 425 aa16.86■□□□□ 0.29
HMGXB3-202ENST00000503427 PTPRN2Q92932 1015 aa16.86■□□□□ 0.29
HMGXB3-202ENST00000503427 CAVIN3Q969G5 261 aa16.86■□□□□ 0.29
HMGXB3-202ENST00000503427 RMDN1Q96DB5 314 aa16.86■□□□□ 0.29
HMGXB3-202ENST00000503427 PPP1R2P1Q96PQ5 205 aa16.86■□□□□ 0.29
HMGXB3-202ENST00000503427 KIF17Q9P2E2 1029 aa16.86■□□□□ 0.29
HMGXB3-202ENST00000503427 TJP2Q9UDY2 1190 aa16.86■□□□□ 0.29
HMGXB3-202ENST00000503427 UBQLN1Q9UMX0 589 aaKnown RBP16.86■□□□□ 0.29
HMGXB3-202ENST00000503427 NEMP1O14524 444 aa16.85■□□□□ 0.29
HMGXB3-202ENST00000503427 MYL2P10916 166 aa16.85■□□□□ 0.29
HMGXB3-202ENST00000503427 DSG3P32926 999 aa16.85■□□□□ 0.29
HMGXB3-202ENST00000503427 NPTX2P47972 431 aa16.85■□□□□ 0.29
HMGXB3-202ENST00000503427 NIPA1Q7RTP0 329 aa16.85■□□□□ 0.29
HMGXB3-202ENST00000503427 TAS2R42Q7RTR8 314 aa16.85■□□□□ 0.29
HMGXB3-202ENST00000503427 SH3TC2Q8TF17 1288 aa16.85■□□□□ 0.29
HMGXB3-202ENST00000503427 WHRNQ9P202 907 aa16.85■□□□□ 0.29
HMGXB3-202ENST00000503427 ARHGAP20Q9P2F6 1191 aa16.85■□□□□ 0.29
HMGXB3-202ENST00000503427 CDY2AQ9Y6F7 541 aa16.85■□□□□ 0.29
HMGXB3-202ENST00000503427 CDY1Q9Y6F8 540 aa16.85■□□□□ 0.29
HMGXB3-202ENST00000503427 CXCL11O14625 94 aa16.85■□□□□ 0.29
HMGXB3-202ENST00000503427 ESRRBO95718 433 aa16.85■□□□□ 0.29
HMGXB3-202ENST00000503427 ANO4Q32M45 955 aa16.85■□□□□ 0.29
HMGXB3-202ENST00000503427 SETD3Q86TU7 594 aaPredicted RBP16.85■□□□□ 0.29
HMGXB3-202ENST00000503427 RNF217Q8TC41 542 aa16.85■□□□□ 0.29
HMGXB3-202ENST00000503427 RMDN2Q96LZ7 410 aa16.85■□□□□ 0.29
HMGXB3-202ENST00000503427 SH3GL3Q99963 347 aa16.85■□□□□ 0.29
HMGXB3-202ENST00000503427 TASP1Q9H6P5 420 aa16.85■□□□□ 0.29
HMGXB3-202ENST00000503427 DDX4Q9NQI0 724 aaKnown RBP16.85■□□□□ 0.29
HMGXB3-202ENST00000503427 OLFML3Q9NRN5 406 aa16.85■□□□□ 0.29
HMGXB3-202ENST00000503427 AIPL1Q9NZN9 384 aa16.85■□□□□ 0.29
HMGXB3-202ENST00000503427 EEF2KO00418 725 aaKnown RBP16.85■□□□□ 0.29
HMGXB3-202ENST00000503427 WNT10BO00744 389 aa16.85■□□□□ 0.29
HMGXB3-202ENST00000503427 MYO1DO94832 1006 aa16.85■□□□□ 0.29
HMGXB3-202ENST00000503427 TGFB3P10600 412 aa16.85■□□□□ 0.29
HMGXB3-202ENST00000503427 ENO3P13929 434 aaPredicted RBP16.85■□□□□ 0.29
HMGXB3-202ENST00000503427 RAD51Q06609 339 aa16.85■□□□□ 0.29
HMGXB3-202ENST00000503427 DCP1BQ8IZD4 617 aaKnown RBP16.85■□□□□ 0.29
HMGXB3-202ENST00000503427 ASIC4Q96FT7 647 aa16.85■□□□□ 0.29
HMGXB3-202ENST00000503427 DMGDHQ9UI17 866 aaKnown RBP16.85■□□□□ 0.29
HMGXB3-202ENST00000503427 KCNA3P22001 575 aa16.85■□□□□ 0.29
HMGXB3-202ENST00000503427 YY1P25490 414 aa16.85■□□□□ 0.29
HMGXB3-202ENST00000503427 DNAJC3Q13217 504 aa16.85■□□□□ 0.29
HMGXB3-202ENST00000503427 CUL2Q13617 745 aa16.85■□□□□ 0.29
HMGXB3-202ENST00000503427 NT5DC1Q5TFE4 455 aa16.85■□□□□ 0.29
HMGXB3-202ENST00000503427 MEI1Q5TIA1 1274 aa16.85■□□□□ 0.29
HMGXB3-202ENST00000503427 CYB5D1Q6P9G0 228 aa16.85■□□□□ 0.29
HMGXB3-202ENST00000503427 ANKZF1Q9H8Y5 726 aa16.85■□□□□ 0.29
HMGXB3-202ENST00000503427 NOD2Q9HC29 1040 aa16.85■□□□□ 0.29
HMGXB3-202ENST00000503427 CHORDC1Q9UHD1 332 aaPredicted RBP16.85■□□□□ 0.29
HMGXB3-202ENST00000503427 AK9Q5TCS8 1911 aa16.85■□□□□ 0.29
HMGXB3-202ENST00000503427 C17orf102A2RUQ5 167 aa16.84■□□□□ 0.29
HMGXB3-202ENST00000503427 RPLP2P05387 115 aaKnown RBP16.84■□□□□ 0.29
HMGXB3-202ENST00000503427 PDGFRBP09619 1106 aa16.84■□□□□ 0.29
HMGXB3-202ENST00000503427 MRPS35P82673 323 aaKnown RBP16.84■□□□□ 0.29
HMGXB3-202ENST00000503427 CYTH1Q15438 398 aa16.84■□□□□ 0.29
HMGXB3-202ENST00000503427 BOLA3Q53S33 107 aa16.84■□□□□ 0.29
HMGXB3-202ENST00000503427 TMC2Q8TDI7 906 aa16.84■□□□□ 0.29
HMGXB3-202ENST00000503427 ERFP50548 548 aa16.84■□□□□ 0.29
HMGXB3-202ENST00000503427 LAMB3Q13751 1172 aa16.84■□□□□ 0.29
HMGXB3-202ENST00000503427 KRT33BQ14525 404 aa16.84■□□□□ 0.29
HMGXB3-202ENST00000503427 ZNF720Q7Z2F6 126 aa16.84■□□□□ 0.29
HMGXB3-202ENST00000503427 PACSIN1Q9BY11 444 aa16.84■□□□□ 0.29
HMGXB3-202ENST00000503427 CXorf56Q9H5V9 222 aa16.84■□□□□ 0.29
HMGXB3-202ENST00000503427 NDFIP2Q9NV92 336 aa16.84■□□□□ 0.29
HMGXB3-202ENST00000503427 ARHGEF38Q9NXL2 777 aa16.84■□□□□ 0.29
HMGXB3-202ENST00000503427 NPTXRO95502 500 aa16.84■□□□□ 0.29
HMGXB3-202ENST00000503427 SARSP49591 514 aaKnown RBP16.84■□□□□ 0.29
HMGXB3-202ENST00000503427 TAF6P49848 677 aa16.84■□□□□ 0.29
HMGXB3-202ENST00000503427 SMTNL2Q2TAL5 461 aa16.84■□□□□ 0.29
HMGXB3-202ENST00000503427 RNF180Q86T96 592 aa16.84■□□□□ 0.29
HMGXB3-202ENST00000503427 ATPAF2Q8N5M1 289 aa16.84■□□□□ 0.29
HMGXB3-202ENST00000503427 CCDC134Q9H6E4 229 aa16.84■□□□□ 0.29
HMGXB3-202ENST00000503427 GBA2Q9HCG7 927 aaPredicted RBP16.84■□□□□ 0.29
HMGXB3-202ENST00000503427 MAPTP10636 758 aaKnown RBP16.84■□□□□ 0.29
HMGXB3-202ENST00000503427 EFHC1Q5JVL4 640 aa16.84■□□□□ 0.29
HMGXB3-202ENST00000503427 FAM71DQ8N9W8 422 aa16.84■□□□□ 0.29
HMGXB3-202ENST00000503427 TMA16Q96EY4 203 aaKnown RBP16.84■□□□□ 0.29
HMGXB3-202ENST00000503427 PPP1R36Q96LQ0 422 aa16.84■□□□□ 0.29
HMGXB3-202ENST00000503427 MTIF3Q9H2K0 278 aaKnown RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms