RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 ENOX2Q16206 610 aaKnown RBP16.91■□□□□ 0.3
HDAC6-236ENST00000498808 SPATA1Q5VX52 437 aa16.91■□□□□ 0.3
HDAC6-236ENST00000498808 CC2D1AQ6P1N0 951 aaPredicted RBP16.91■□□□□ 0.3
HDAC6-236ENST00000498808 KCNK18Q7Z418 384 aa16.91■□□□□ 0.3
HDAC6-236ENST00000498808 LRRTM3Q86VH5 581 aa16.91■□□□□ 0.3
HDAC6-236ENST00000498808 CPA6Q8N4T0 437 aa16.91■□□□□ 0.3
HDAC6-236ENST00000498808 STKLD1Q8NE28 680 aa16.91■□□□□ 0.3
HDAC6-236ENST00000498808 SPIRE2Q8WWL2 714 aa16.91■□□□□ 0.3
HDAC6-236ENST00000498808 PIGKQ92643 395 aa16.91■□□□□ 0.3
HDAC6-236ENST00000498808 EVLQ9UI08 416 aaPredicted RBP16.91■□□□□ 0.3
HDAC6-236ENST00000498808 DNM3Q9UQ16 869 aa16.91■□□□□ 0.3
HDAC6-236ENST00000498808 PI4KAP42356 2102 aa16.91■□□□□ 0.3
HDAC6-236ENST00000498808 LAMA5O15230 3695 aa16.9■□□□□ 0.3
HDAC6-236ENST00000498808 ADAMTS20P59510 1910 aa16.9■□□□□ 0.3
HDAC6-236ENST00000498808 SPAARA0A1B0GVQ0 90 aa16.9■□□□□ 0.3
HDAC6-236ENST00000498808 ANTXRLA6NF34 631 aa16.9■□□□□ 0.3
HDAC6-236ENST00000498808 XPOTO43592 962 aaKnown RBP16.9■□□□□ 0.3
HDAC6-236ENST00000498808 FAM189A1O60320 539 aa16.9■□□□□ 0.3
HDAC6-236ENST00000498808 MATR3P43243 847 aaKnown RBP eCLIP16.9■□□□□ 0.3
HDAC6-236ENST00000498808 DHPSP49366 369 aaPredicted RBP16.9■□□□□ 0.3
HDAC6-236ENST00000498808 ZNF268Q14587 947 aaPredicted RBP16.9■□□□□ 0.3
HDAC6-236ENST00000498808 MTF1Q14872 753 aa16.9■□□□□ 0.3
HDAC6-236ENST00000498808 TTC38Q5R3I4 469 aa16.9■□□□□ 0.3
HDAC6-236ENST00000498808 ANO7Q6IWH7 933 aa16.9■□□□□ 0.3
HDAC6-236ENST00000498808 MON1AQ86VX9 555 aa16.9■□□□□ 0.3
HDAC6-236ENST00000498808 IGSF22Q8N9C0 903 aa16.9■□□□□ 0.3
HDAC6-236ENST00000498808 SPPL2BQ8TCT7 592 aa16.9■□□□□ 0.3
HDAC6-236ENST00000498808 EXOC4Q96A65 974 aa16.9■□□□□ 0.3
HDAC6-236ENST00000498808 CNOT6LQ96LI5 555 aaKnown RBP16.9■□□□□ 0.3
HDAC6-236ENST00000498808 NBEAQ8NFP9 2946 aa16.9■□□□□ 0.3
HDAC6-236ENST00000498808 PP2D1A8MPX8 630 aa16.89■□□□□ 0.29
HDAC6-236ENST00000498808 TADA3O75528 432 aa16.89■□□□□ 0.29
HDAC6-236ENST00000498808 CAPNS1P04632 268 aa16.89■□□□□ 0.29
HDAC6-236ENST00000498808 ADRB2P07550 413 aa16.89■□□□□ 0.29
HDAC6-236ENST00000498808 GUCY2CP25092 1073 aa16.89■□□□□ 0.29
HDAC6-236ENST00000498808 GPR15P49685 360 aa16.89■□□□□ 0.29
HDAC6-236ENST00000498808 RAD51AP2Q09MP3 1159 aa16.89■□□□□ 0.29
HDAC6-236ENST00000498808 NBR1Q14596 966 aa16.89■□□□□ 0.29
HDAC6-236ENST00000498808 ANKRD1Q15327 319 aa16.89■□□□□ 0.29
HDAC6-236ENST00000498808 ZNF77Q15935 545 aa16.89■□□□□ 0.29
HDAC6-236ENST00000498808 TRIM61Q5EBN2 209 aa16.89■□□□□ 0.29
HDAC6-236ENST00000498808 C9orf57Q5W0N0 161 aa16.89■□□□□ 0.29
HDAC6-236ENST00000498808 PIP4P1Q86T03 277 aa16.89■□□□□ 0.29
HDAC6-236ENST00000498808 MDGA1Q8NFP4 955 aa16.89■□□□□ 0.29
HDAC6-236ENST00000498808 USP33Q8TEY7 942 aa16.89■□□□□ 0.29
HDAC6-236ENST00000498808 OSCP1Q8WVF1 389 aa16.89■□□□□ 0.29
HDAC6-236ENST00000498808 MRPS31Q92665 395 aaKnown RBP16.89■□□□□ 0.29
HDAC6-236ENST00000498808 SLC32A1Q9H598 525 aa16.89■□□□□ 0.29
HDAC6-236ENST00000498808 ABI2Q9NYB9 513 aaPredicted RBP16.89■□□□□ 0.29
HDAC6-236ENST00000498808 WNT6Q9Y6F9 365 aa16.89■□□□□ 0.29
HDAC6-236ENST00000498808 SMG1Q96Q15 3661 aaKnown RBP16.89■□□□□ 0.29
HDAC6-236ENST00000498808 FREM2Q5SZK8 3169 aa16.88■□□□□ 0.29
HDAC6-236ENST00000498808 PIRO00625 290 aa16.88■□□□□ 0.29
HDAC6-236ENST00000498808 PLS3P13797 630 aa16.88■□□□□ 0.29
HDAC6-236ENST00000498808 MAPK8P45983 427 aa16.88■□□□□ 0.29
HDAC6-236ENST00000498808 SIM1P81133 766 aaPredicted RBP16.88■□□□□ 0.29
HDAC6-236ENST00000498808 FAM160A1Q05DH4 1040 aa16.88■□□□□ 0.29
HDAC6-236ENST00000498808 ST3GAL1Q11201 340 aa16.88■□□□□ 0.29
HDAC6-236ENST00000498808 LMAN2Q12907 356 aa16.88■□□□□ 0.29
HDAC6-236ENST00000498808 USP4Q13107 963 aa16.88■□□□□ 0.29
HDAC6-236ENST00000498808 PDIA5Q14554 519 aa16.88■□□□□ 0.29
HDAC6-236ENST00000498808 SAFBQ15424 915 aaKnown RBP eCLIP16.88■□□□□ 0.29
HDAC6-236ENST00000498808 EML3Q32P44 896 aa16.88■□□□□ 0.29
HDAC6-236ENST00000498808 JADE1Q6IE81 842 aa16.88■□□□□ 0.29
HDAC6-236ENST00000498808 PROSER1Q86XN7 944 aa16.88■□□□□ 0.29
HDAC6-236ENST00000498808 C2orf15Q8WU43 125 aaKnown RBP16.88■□□□□ 0.29
HDAC6-236ENST00000498808 TMEM74BQ9NUR3 256 aa16.88■□□□□ 0.29
HDAC6-236ENST00000498808 DUS2Q9NX74 493 aaKnown RBP16.88■□□□□ 0.29
HDAC6-236ENST00000498808 ITPR1Q14643 2758 aa16.87■□□□□ 0.29
HDAC6-236ENST00000498808 ANO9A1A5B4 782 aa16.87■□□□□ 0.29
HDAC6-236ENST00000498808 NFICP08651 508 aa16.87■□□□□ 0.29
HDAC6-236ENST00000498808 HNRNPLP14866 589 aaKnown RBP eCLIP16.87■□□□□ 0.29
HDAC6-236ENST00000498808 ENGP17813 658 aa16.87■□□□□ 0.29
HDAC6-236ENST00000498808 PAX3P23760 479 aa16.87■□□□□ 0.29
HDAC6-236ENST00000498808 CDC25AP30304 524 aa16.87■□□□□ 0.29
HDAC6-236ENST00000498808 SMTNP53814 917 aa16.87■□□□□ 0.29
HDAC6-236ENST00000498808 SMARCB1Q12824 385 aa16.87■□□□□ 0.29
HDAC6-236ENST00000498808 SEMA3BQ13214 749 aa16.87■□□□□ 0.29
HDAC6-236ENST00000498808 SOWAHCQ53LP3 525 aaPredicted RBP16.87■□□□□ 0.29
HDAC6-236ENST00000498808 C2orf27AQ580R0 203 aa16.87■□□□□ 0.29
HDAC6-236ENST00000498808 SDHAF4Q5VUM1 108 aa16.87■□□□□ 0.29
HDAC6-236ENST00000498808 OLIG1Q8TAK6 271 aa16.87■□□□□ 0.29
HDAC6-236ENST00000498808 ATP2A3Q93084 1043 aa16.87■□□□□ 0.29
HDAC6-236ENST00000498808 SLC22A12Q96S37 553 aa16.87■□□□□ 0.29
HDAC6-236ENST00000498808 TSPAN18Q96SJ8 248 aa16.87■□□□□ 0.29
HDAC6-236ENST00000498808 TIPINQ9BVW5 301 aa16.87■□□□□ 0.29
HDAC6-236ENST00000498808 RPF1Q9H9Y2 349 aaKnown RBP16.87■□□□□ 0.29
HDAC6-236ENST00000498808 TMLHEQ9NVH6 421 aa16.87■□□□□ 0.29
HDAC6-236ENST00000498808 DSEQ9UL01 958 aa16.87■□□□□ 0.29
HDAC6-236ENST00000498808 MAGED2Q9UNF1 606 aaPredicted RBP16.87■□□□□ 0.29
HDAC6-236ENST00000498808 TCHHQ07283 1943 aa16.87■□□□□ 0.29
HDAC6-236ENST00000498808 FAM221BA6H8Z2 402 aa16.86■□□□□ 0.29
HDAC6-236ENST00000498808 K7EQS6 105 aa16.86■□□□□ 0.29
HDAC6-236ENST00000498808 OGTO15294 1046 aa16.86■□□□□ 0.29
HDAC6-236ENST00000498808 PTGER3P43115 390 aa16.86■□□□□ 0.29
HDAC6-236ENST00000498808 IFNAR2P48551 515 aa16.86■□□□□ 0.29
HDAC6-236ENST00000498808 SEC13P55735 322 aa16.86■□□□□ 0.29
HDAC6-236ENST00000498808 CRY1Q16526 586 aa16.86■□□□□ 0.29
HDAC6-236ENST00000498808 WSCD1Q658N2 575 aa16.86■□□□□ 0.29
HDAC6-236ENST00000498808 TMEM92Q6UXU6 159 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms