RNA–Protein interactions for RNA: ENST00000497171.1

PHC3-216, Transcript of polyhomeotic homolog 3, humanhuman

TSL 2

Gene PHC3, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-216ENST00000497171 ZNF782Q6ZMW2 699 aaPredicted RBP4.12□□□□□ -1.75
PHC3-216ENST00000497171 OVCH2Q7RTZ1 564 aa4.12□□□□□ -1.75
PHC3-216ENST00000497171 YTHDF3Q7Z739 585 aaKnown RBP4.12□□□□□ -1.75
PHC3-216ENST00000497171 CLNKQ7Z7G1 428 aa4.12□□□□□ -1.75
PHC3-216ENST00000497171 DAAM2Q86T65 1068 aa4.12□□□□□ -1.75
PHC3-216ENST00000497171 RASAL3Q86YV0 1011 aa4.12□□□□□ -1.75
PHC3-216ENST00000497171 FAM156AQ8NDB6 213 aa4.12□□□□□ -1.75
PHC3-216ENST00000497171 TTC17Q96AE7 1141 aa4.12□□□□□ -1.75
PHC3-216ENST00000497171 B3GNT5Q9BYG0 378 aa4.12□□□□□ -1.75
PHC3-216ENST00000497171 ARNT2Q9HBZ2 717 aa4.12□□□□□ -1.75
PHC3-216ENST00000497171 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.12□□□□□ -1.75
PHC3-216ENST00000497171 ST3GAL5Q9UNP4 418 aa4.12□□□□□ -1.75
PHC3-216ENST00000497171 PCDHA3Q9Y5H8 950 aa4.12□□□□□ -1.75
PHC3-216ENST00000497171 H3BML4 177 aa4.11□□□□□ -1.75
PHC3-216ENST00000497171 TPP1O14773 563 aa4.11□□□□□ -1.75
PHC3-216ENST00000497171 GPR32O75388 356 aa4.11□□□□□ -1.75
PHC3-216ENST00000497171 DDCP20711 480 aa4.11□□□□□ -1.75
PHC3-216ENST00000497171 SMARCA1P28370 1054 aa4.11□□□□□ -1.75
PHC3-216ENST00000497171 SLC6A9P48067 706 aa4.11□□□□□ -1.75
PHC3-216ENST00000497171 MAP2K6P52564 334 aa4.11□□□□□ -1.75
PHC3-216ENST00000497171 DSC2Q02487 901 aa4.11□□□□□ -1.75
PHC3-216ENST00000497171 BRD3Q15059 726 aa4.11□□□□□ -1.75
PHC3-216ENST00000497171 SAFBQ15424 915 aaKnown RBP eCLIP4.11□□□□□ -1.75
PHC3-216ENST00000497171 KIAA0753Q2KHM9 967 aa4.11□□□□□ -1.75
PHC3-216ENST00000497171 PREPLQ4J6C6 727 aaPredicted RBP4.11□□□□□ -1.75
PHC3-216ENST00000497171 OTUD7BQ6GQQ9 843 aa4.11□□□□□ -1.75
PHC3-216ENST00000497171 NPNTQ6UXI9 565 aa4.11□□□□□ -1.75
PHC3-216ENST00000497171 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.11□□□□□ -1.75
PHC3-216ENST00000497171 SAMD14Q8IZD0 417 aaPredicted RBP4.11□□□□□ -1.75
PHC3-216ENST00000497171 ZGPATQ8N5A5 531 aaKnown RBP4.11□□□□□ -1.75
PHC3-216ENST00000497171 SMRP1Q8NCR6 262 aa4.11□□□□□ -1.75
PHC3-216ENST00000497171 C3orf20Q8ND61 904 aa4.11□□□□□ -1.75
PHC3-216ENST00000497171 KLHDC4Q8TBB5 520 aa4.11□□□□□ -1.75
PHC3-216ENST00000497171 SARGQ9BW04 601 aa4.11□□□□□ -1.75
PHC3-216ENST00000497171 LMBRD1Q9NUN5 540 aa4.11□□□□□ -1.75
PHC3-216ENST00000497171 ELOVL5Q9NYP7 299 aa4.11□□□□□ -1.75
PHC3-216ENST00000497171 ABCF2Q9UG63 623 aa4.11□□□□□ -1.75
PHC3-216ENST00000497171 STAP2Q9UGK3 403 aa4.11□□□□□ -1.75
PHC3-216ENST00000497171 ZNF112Q9UJU3 913 aa4.11□□□□□ -1.75
PHC3-216ENST00000497171 POLHQ9Y253 713 aa4.11□□□□□ -1.75
PHC3-216ENST00000497171 STXBP5LQ9Y2K9 1186 aa4.11□□□□□ -1.75
PHC3-216ENST00000497171 NEU2Q9Y3R4 380 aa4.11□□□□□ -1.75
PHC3-216ENST00000497171 PCDHGB6Q9Y5F9 930 aa4.11□□□□□ -1.75
PHC3-216ENST00000497171 ARID4BQ4LE39 1312 aaPredicted RBP4.11□□□□□ -1.75
PHC3-216ENST00000497171 A0A1W2PS29 197 aa4.1□□□□□ -1.75
PHC3-216ENST00000497171 CFAP69A5D8W1 941 aa4.1□□□□□ -1.75
PHC3-216ENST00000497171 CAPN8A6NHC0 703 aa4.1□□□□□ -1.75
PHC3-216ENST00000497171 A6NNZ2 444 aa4.1□□□□□ -1.75
PHC3-216ENST00000497171 ADM5C9JUS6 153 aa4.1□□□□□ -1.75
PHC3-216ENST00000497171 FAM227AF5H4B4 570 aa4.1□□□□□ -1.75
PHC3-216ENST00000497171 SGTAO43765 313 aa4.1□□□□□ -1.75
PHC3-216ENST00000497171 TUSC2O75896 110 aa4.1□□□□□ -1.75
PHC3-216ENST00000497171 MYL3P08590 195 aa4.1□□□□□ -1.75
PHC3-216ENST00000497171 FPR1P21462 350 aa4.1□□□□□ -1.75
PHC3-216ENST00000497171 ALDH1A3P47895 512 aa4.1□□□□□ -1.75
PHC3-216ENST00000497171 ZNF280AP59817 542 aaPredicted RBP4.1□□□□□ -1.75
PHC3-216ENST00000497171 RPS7P62081 194 aaKnown RBP4.1□□□□□ -1.75
PHC3-216ENST00000497171 CREMQ03060 361 aa4.1□□□□□ -1.75
PHC3-216ENST00000497171 FPGSQ05932 587 aa4.1□□□□□ -1.75
PHC3-216ENST00000497171 TARDBPQ13148 414 aaKnown RBP eCLIP4.1□□□□□ -1.756e-7■■□□□ 12.6
PHC3-216ENST00000497171 NOGQ13253 232 aa4.1□□□□□ -1.75
PHC3-216ENST00000497171 OS9Q13438 667 aaPredicted RBP4.1□□□□□ -1.75
PHC3-216ENST00000497171 HDAC1Q13547 482 aaPredicted RBP4.1□□□□□ -1.75
PHC3-216ENST00000497171 MIDNQ504T8 468 aa4.1□□□□□ -1.75
PHC3-216ENST00000497171 PXDC1Q5TGL8 231 aa4.1□□□□□ -1.75
PHC3-216ENST00000497171 IL31Q6EBC2 164 aa4.1□□□□□ -1.75
PHC3-216ENST00000497171 DARS2Q6PI48 645 aaKnown RBP4.1□□□□□ -1.75
PHC3-216ENST00000497171 HEATR3Q7Z4Q2 680 aa4.1□□□□□ -1.75
PHC3-216ENST00000497171 ADAMTS15Q8TE58 950 aa4.1□□□□□ -1.75
PHC3-216ENST00000497171 HOXB13Q92826 284 aaPredicted RBP4.1□□□□□ -1.75
PHC3-216ENST00000497171 CYFIP2Q96F07 1278 aa4.1□□□□□ -1.75
PHC3-216ENST00000497171 CDK5RAP3Q96JB5 506 aa4.1□□□□□ -1.75
PHC3-216ENST00000497171 MPHOSPH6Q99547 160 aaKnown RBP4.1□□□□□ -1.75
PHC3-216ENST00000497171 FBXO34Q9NWN3 711 aa4.1□□□□□ -1.75
PHC3-216ENST00000497171 HSFX1Q9UBD0 423 aa4.1□□□□□ -1.75
PHC3-216ENST00000497171 FEZ2Q9UHY8 353 aaPredicted RBP4.1□□□□□ -1.75
PHC3-216ENST00000497171 ADAM21Q9UKJ8 722 aa4.1□□□□□ -1.75
PHC3-216ENST00000497171 ACTL7AQ9Y615 435 aa4.1□□□□□ -1.75
PHC3-216ENST00000497171 IGKV2D-30A0A075B6S6 120 aa4.09□□□□□ -1.75
PHC3-216ENST00000497171 PRAMEF33A0A0G2JMD5 474 aa4.09□□□□□ -1.75
PHC3-216ENST00000497171 APAF1O14727 1248 aa4.09□□□□□ -1.75
PHC3-216ENST00000497171 SLC16A6O15403 523 aa4.09□□□□□ -1.75
PHC3-216ENST00000497171 PRAMEF10O60809 474 aa4.09□□□□□ -1.75
PHC3-216ENST00000497171 PRSS23O95084 383 aa4.09□□□□□ -1.75
PHC3-216ENST00000497171 AMY1AP04745 511 aa4.09□□□□□ -1.75
PHC3-216ENST00000497171 IFIT2P09913 472 aaKnown RBP4.09□□□□□ -1.75
PHC3-216ENST00000497171 TRIM27P14373 513 aa4.09□□□□□ -1.75
PHC3-216ENST00000497171 RHCEP18577 417 aa4.09□□□□□ -1.75
PHC3-216ENST00000497171 PCSK1P29120 753 aa4.09□□□□□ -1.75
PHC3-216ENST00000497171 NEK3P51956 506 aa4.09□□□□□ -1.75
PHC3-216ENST00000497171 RHDQ02161 417 aa4.09□□□□□ -1.75
PHC3-216ENST00000497171 PICALMQ13492 652 aa4.09□□□□□ -1.75
PHC3-216ENST00000497171 RAB39AQ14964 217 aa4.09□□□□□ -1.75
PHC3-216ENST00000497171 CNN3Q15417 329 aaKnown RBP4.09□□□□□ -1.75
PHC3-216ENST00000497171 ATP2B3Q16720 1220 aa4.09□□□□□ -1.75
PHC3-216ENST00000497171 TXNRD1Q16881 649 aa4.09□□□□□ -1.75
PHC3-216ENST00000497171 ANO6Q4KMQ2 910 aa4.09□□□□□ -1.75
PHC3-216ENST00000497171 KIAA1161Q6NSJ0 714 aa4.09□□□□□ -1.75
PHC3-216ENST00000497171 SLC18B1Q6NT16 456 aa4.09□□□□□ -1.75
PHC3-216ENST00000497171 SEM1Q6ZVN7 128 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms