RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 GH1P01241 217 aa15.61■□□□□ 0.09
CHTOP-206ENST00000495554 TCF4P15884 667 aa15.61■□□□□ 0.09
CHTOP-206ENST00000495554 KLRC2P26717 231 aa15.61■□□□□ 0.09
CHTOP-206ENST00000495554 ATP5DP30049 168 aa15.61■□□□□ 0.09
CHTOP-206ENST00000495554 LIG3P49916 1009 aa15.61■□□□□ 0.09
CHTOP-206ENST00000495554 GPR162Q16538 588 aa15.61■□□□□ 0.09
CHTOP-206ENST00000495554 QPCTQ16769 361 aa15.61■□□□□ 0.09
CHTOP-206ENST00000495554 LONRF1Q17RB8 773 aa15.61■□□□□ 0.09
CHTOP-206ENST00000495554 GKAP1Q5VSY0 366 aaPredicted RBP15.61■□□□□ 0.09
CHTOP-206ENST00000495554 RELL1Q8IUW5 271 aa15.61■□□□□ 0.09
CHTOP-206ENST00000495554 MICALL1Q8N3F8 863 aa15.61■□□□□ 0.09
CHTOP-206ENST00000495554 ATXN2LQ8WWM7 1075 aaKnown RBP15.61■□□□□ 0.09
CHTOP-206ENST00000495554 FAXDC2Q96IV6 333 aa15.61■□□□□ 0.09
CHTOP-206ENST00000495554 PTPN18Q99952 460 aa15.61■□□□□ 0.09
CHTOP-206ENST00000495554 CDT1Q9H211 546 aa15.61■□□□□ 0.09
CHTOP-206ENST00000495554 LHX5Q9H2C1 402 aa15.61■□□□□ 0.09
CHTOP-206ENST00000495554 INTS9Q9NV88 658 aaKnown RBP15.61■□□□□ 0.09
CHTOP-206ENST00000495554 KLHL11Q9NVR0 708 aa15.61■□□□□ 0.09
CHTOP-206ENST00000495554 DDX56Q9NY93 547 aaKnown RBP15.61■□□□□ 0.09
CHTOP-206ENST00000495554 MGAMO43451 1857 aa15.61■□□□□ 0.09
CHTOP-206ENST00000495554 GPR25O00155 361 aa15.6■□□□□ 0.09
CHTOP-206ENST00000495554 MED7O43513 233 aa15.6■□□□□ 0.09
CHTOP-206ENST00000495554 LIASO43766 372 aa15.6■□□□□ 0.09
CHTOP-206ENST00000495554 KRT10P13645 584 aa15.6■□□□□ 0.09
CHTOP-206ENST00000495554 ATF7P17544 494 aaPredicted RBP15.6■□□□□ 0.09
CHTOP-206ENST00000495554 POLR2BP30876 1174 aaKnown RBP15.6■□□□□ 0.09
CHTOP-206ENST00000495554 PTPN7P35236 360 aa15.6■□□□□ 0.09
CHTOP-206ENST00000495554 OGDHQ02218 1023 aa15.6■□□□□ 0.09
CHTOP-206ENST00000495554 IFT88Q13099 833 aa15.6■□□□□ 0.09
CHTOP-206ENST00000495554 AMHR2Q16671 573 aa15.6■□□□□ 0.09
CHTOP-206ENST00000495554 KYNUQ16719 465 aa15.6■□□□□ 0.09
CHTOP-206ENST00000495554 IZUMO3Q5VZ72 239 aa15.6■□□□□ 0.09
CHTOP-206ENST00000495554 KAZNQ674X7 775 aa15.6■□□□□ 0.09
CHTOP-206ENST00000495554 MFSD7Q6UXD7 560 aa15.6■□□□□ 0.09
CHTOP-206ENST00000495554 CEP128Q6ZU80 1094 aa15.6■□□□□ 0.09
CHTOP-206ENST00000495554 PPTC7Q8NI37 304 aa15.6■□□□□ 0.09
CHTOP-206ENST00000495554 EMID1Q96A84 441 aaPredicted RBP15.6■□□□□ 0.09
CHTOP-206ENST00000495554 SEC16BQ96JE7 1060 aa15.6■□□□□ 0.09
CHTOP-206ENST00000495554 FOXP3Q9BZS1 431 aa15.6■□□□□ 0.09
CHTOP-206ENST00000495554 NXF1Q9UBU9 619 aaKnown RBP15.6■□□□□ 0.09
CHTOP-206ENST00000495554 PLXNB2O15031 1838 aa15.6■□□□□ 0.09
CHTOP-206ENST00000495554 KLHL33A6NCF5 533 aa15.6■□□□□ 0.09
CHTOP-206ENST00000495554 TCEA3O75764 348 aa15.6■□□□□ 0.09
CHTOP-206ENST00000495554 POU5F1BQ06416 359 aa15.6■□□□□ 0.09
CHTOP-206ENST00000495554 ZNF467Q7Z7K2 595 aaPredicted RBP15.6■□□□□ 0.09
CHTOP-206ENST00000495554 CACNA2D3Q8IZS8 1091 aa15.6■□□□□ 0.09
CHTOP-206ENST00000495554 PRMT7Q9NVM4 692 aaPredicted RBP15.6■□□□□ 0.09
CHTOP-206ENST00000495554 RPS6KL1Q9Y6S9 549 aa15.6■□□□□ 0.09
CHTOP-206ENST00000495554 PCNTO95613 3336 aa15.59■□□□□ 0.09
CHTOP-206ENST00000495554 A0A087WZ62 844 aa15.59■□□□□ 0.09
CHTOP-206ENST00000495554 KRT19P08727 400 aa15.59■□□□□ 0.09
CHTOP-206ENST00000495554 CXCL8P10145 99 aa15.59■□□□□ 0.09
CHTOP-206ENST00000495554 DRD4P21917 467 aa15.59■□□□□ 0.09
CHTOP-206ENST00000495554 GCLCP48506 637 aaPredicted RBP15.59■□□□□ 0.09
CHTOP-206ENST00000495554 TFDP3Q5H9I0 405 aa15.59■□□□□ 0.09
CHTOP-206ENST00000495554 ZNF667Q5HYK9 610 aa15.59■□□□□ 0.09
CHTOP-206ENST00000495554 SPOCD1Q6ZMY3 1216 aa15.59■□□□□ 0.09
CHTOP-206ENST00000495554 GPR142Q7Z601 462 aa15.59■□□□□ 0.09
CHTOP-206ENST00000495554 EXOC3L1Q86VI1 746 aa15.59■□□□□ 0.09
CHTOP-206ENST00000495554 TMEM130Q8N3G9 435 aa15.59■□□□□ 0.09
CHTOP-206ENST00000495554 CABS1Q96KC9 395 aa15.59■□□□□ 0.09
CHTOP-206ENST00000495554 ZNF317Q96PQ6 595 aaPredicted RBP15.59■□□□□ 0.09
CHTOP-206ENST00000495554 FDXACB1Q9BRP7 624 aaPredicted RBP15.59■□□□□ 0.09
CHTOP-206ENST00000495554 BCO2Q9BYV7 579 aa15.59■□□□□ 0.09
CHTOP-206ENST00000495554 CCDC134Q9H6E4 229 aa15.59■□□□□ 0.09
CHTOP-206ENST00000495554 ANK1P16157 1881 aa15.59■□□□□ 0.09
CHTOP-206ENST00000495554 ZNF286BP0CG31 522 aa15.59■□□□□ 0.09
CHTOP-206ENST00000495554 CD19P15391 556 aa15.59■□□□□ 0.09
CHTOP-206ENST00000495554 PHKA2P46019 1235 aa15.59■□□□□ 0.09
CHTOP-206ENST00000495554 BIRC2Q13490 618 aa15.59■□□□□ 0.09
CHTOP-206ENST00000495554 FAM187BQ17R55 369 aa15.59■□□□□ 0.09
CHTOP-206ENST00000495554 WDR72Q3MJ13 1102 aa15.59■□□□□ 0.09
CHTOP-206ENST00000495554 CYP4A22Q5TCH4 519 aa15.59■□□□□ 0.09
CHTOP-206ENST00000495554 HIBCHQ6NVY1 386 aaPredicted RBP15.59■□□□□ 0.09
CHTOP-206ENST00000495554 POLNQ7Z5Q5 900 aa15.59■□□□□ 0.09
CHTOP-206ENST00000495554 IFNLR1Q8IU57 520 aaPredicted RBP15.59■□□□□ 0.09
CHTOP-206ENST00000495554 DNAJC17Q9NVM6 304 aaKnown RBP15.59■□□□□ 0.09
CHTOP-206ENST00000495554 NINJ2Q9NZG7 142 aa15.59■□□□□ 0.09
CHTOP-206ENST00000495554 DNPEPQ9ULA0 475 aa15.59■□□□□ 0.09
CHTOP-206ENST00000495554 ZNF148Q9UQR1 794 aa15.59■□□□□ 0.09
CHTOP-206ENST00000495554 DRG1Q9Y295 367 aaKnown RBP15.59■□□□□ 0.09
CHTOP-206ENST00000495554 P3H1Q32P28 736 aa15.58■□□□□ 0.09
CHTOP-206ENST00000495554 TTC31Q49AM3 519 aaPredicted RBP15.58■□□□□ 0.09
CHTOP-206ENST00000495554 C1QTNF12Q5T7M4 302 aa15.58■□□□□ 0.09
CHTOP-206ENST00000495554 RNF187Q5TA31 235 aaPredicted RBP15.58■□□□□ 0.09
CHTOP-206ENST00000495554 DENND1BQ6P3S1 775 aa15.58■□□□□ 0.09
CHTOP-206ENST00000495554 ZCCHC9Q8N567 271 aaKnown RBP15.58■□□□□ 0.09
CHTOP-206ENST00000495554 ARHGEF2Q92974 986 aaKnown RBP15.58■□□□□ 0.09
CHTOP-206ENST00000495554 PPP1R16BQ96T49 567 aa15.58■□□□□ 0.09
CHTOP-206ENST00000495554 SIX4Q9UIU6 781 aa15.58■□□□□ 0.09
CHTOP-206ENST00000495554 SUFUQ9UMX1 484 aa15.58■□□□□ 0.09
CHTOP-206ENST00000495554 POLIQ9UNA4 740 aa15.58■□□□□ 0.09
CHTOP-206ENST00000495554 hCG_1818297A0A087WSY0 165 aa15.58■□□□□ 0.08
CHTOP-206ENST00000495554 SIGLEC16A6NMB1 481 aa15.58■□□□□ 0.08
CHTOP-206ENST00000495554 PPP1R12AO14974 1030 aaPredicted RBP15.58■□□□□ 0.08
CHTOP-206ENST00000495554 KRT3P12035 628 aa15.58■□□□□ 0.08
CHTOP-206ENST00000495554 SMPD1P17405 629 aa15.58■□□□□ 0.08
CHTOP-206ENST00000495554 TNFAIP2Q03169 654 aa15.58■□□□□ 0.08
CHTOP-206ENST00000495554 GRB14Q14449 540 aa15.58■□□□□ 0.08
CHTOP-206ENST00000495554 PTPN20Q4JDL3 420 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms