RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 ZBP1Q9H171 429 aa13.24□□□□□ -0.29
SNX17-208ENST00000493711 SDCBP2Q9H190 292 aa13.24□□□□□ -0.29
SNX17-208ENST00000493711 TLR9Q9NR96 1032 aa13.24□□□□□ -0.29
SNX17-208ENST00000493711 AIPL1Q9NZN9 384 aa13.24□□□□□ -0.29
SNX17-208ENST00000493711 MTRRQ9UBK8 725 aa13.24□□□□□ -0.29
SNX17-208ENST00000493711 TIMM13Q9Y5L4 95 aaPredicted RBP13.24□□□□□ -0.29
SNX17-208ENST00000493711 PRUNE2Q8WUY3 3088 aa13.24□□□□□ -0.29
SNX17-208ENST00000493711 CITO14578 2027 aa13.23□□□□□ -0.29
SNX17-208ENST00000493711 ATP8B3O60423 1300 aa13.23□□□□□ -0.29
SNX17-208ENST00000493711 MED7O43513 233 aa13.23□□□□□ -0.29
SNX17-208ENST00000493711 MFAP3LO75121 409 aa13.23□□□□□ -0.29
SNX17-208ENST00000493711 CXCL14O95715 111 aa13.23□□□□□ -0.29
SNX17-208ENST00000493711 VDRP11473 427 aa13.23□□□□□ -0.29
SNX17-208ENST00000493711 PTPN1P18031 435 aaKnown RBP13.23□□□□□ -0.29
SNX17-208ENST00000493711 HNRNPH3P31942 346 aaKnown RBP13.23□□□□□ -0.29
SNX17-208ENST00000493711 RAP1GAPP47736 663 aa13.23□□□□□ -0.29
SNX17-208ENST00000493711 ZNF132P52740 706 aa13.23□□□□□ -0.29
SNX17-208ENST00000493711 ASIC2Q16515 512 aa13.23□□□□□ -0.29
SNX17-208ENST00000493711 NFE2Q16621 373 aaPredicted RBP13.23□□□□□ -0.29
SNX17-208ENST00000493711 MEA1Q16626 185 aa13.23□□□□□ -0.29
SNX17-208ENST00000493711 RTP2Q5QGT7 225 aa13.23□□□□□ -0.29
SNX17-208ENST00000493711 SLC8B1Q6J4K2 584 aa13.23□□□□□ -0.29
SNX17-208ENST00000493711 C4orf50Q6ZRC1 276 aa13.23□□□□□ -0.29
SNX17-208ENST00000493711 TAS1R1Q7RTX1 841 aa13.23□□□□□ -0.29
SNX17-208ENST00000493711 ZNF677Q86XU0 584 aa13.23□□□□□ -0.29
SNX17-208ENST00000493711 LNX1Q8TBB1 728 aaPredicted RBP13.23□□□□□ -0.29
SNX17-208ENST00000493711 C2orf15Q8WU43 125 aaKnown RBP13.23□□□□□ -0.29
SNX17-208ENST00000493711 POF1BQ8WVV4 589 aa13.23□□□□□ -0.29
SNX17-208ENST00000493711 PPP2R3CQ969Q6 453 aa13.23□□□□□ -0.29
SNX17-208ENST00000493711 ELMO3Q96BJ8 720 aa13.23□□□□□ -0.29
SNX17-208ENST00000493711 HEXIM2Q96MH2 286 aaKnown RBP13.23□□□□□ -0.29
SNX17-208ENST00000493711 PANX2Q96RD6 677 aa13.23□□□□□ -0.29
SNX17-208ENST00000493711 SYT15Q9BQS2 421 aa13.23□□□□□ -0.29
SNX17-208ENST00000493711 RXFP1Q9HBX9 757 aa13.23□□□□□ -0.29
SNX17-208ENST00000493711 ENTPD7Q9NQZ7 604 aa13.23□□□□□ -0.29
SNX17-208ENST00000493711 MTUS1Q9ULD2 1270 aa13.23□□□□□ -0.29
SNX17-208ENST00000493711 MUC3AQ02505 3323 aa13.22□□□□□ -0.29
SNX17-208ENST00000493711 LRRC53A6NM62 1247 aa13.22□□□□□ -0.29
SNX17-208ENST00000493711 NRDCO43847 1150 aa13.22□□□□□ -0.29
SNX17-208ENST00000493711 TBC1D4O60343 1298 aa13.22□□□□□ -0.29
SNX17-208ENST00000493711 ARHGEF15O94989 841 aa13.22□□□□□ -0.29
SNX17-208ENST00000493711 PDGFRBP09619 1106 aa13.22□□□□□ -0.29
SNX17-208ENST00000493711 ANXA13P27216 316 aa13.22□□□□□ -0.29
SNX17-208ENST00000493711 NDUFV1P49821 464 aa13.22□□□□□ -0.29
SNX17-208ENST00000493711 PDE6CP51160 858 aa13.22□□□□□ -0.29
SNX17-208ENST00000493711 RAD23BP54727 409 aa13.22□□□□□ -0.29
SNX17-208ENST00000493711 PTPN14Q15678 1187 aa13.22□□□□□ -0.29
SNX17-208ENST00000493711 PTPN21Q16825 1174 aa13.22□□□□□ -0.29
SNX17-208ENST00000493711 SGO2Q562F6 1265 aa13.22□□□□□ -0.29
SNX17-208ENST00000493711 INTS6LQ5JSJ4 861 aaKnown RBP13.22□□□□□ -0.29
SNX17-208ENST00000493711 TPGS2Q68CL5 300 aa13.22□□□□□ -0.29
SNX17-208ENST00000493711 OSTM1Q86WC4 334 aa13.22□□□□□ -0.29
SNX17-208ENST00000493711 MRPL43Q8N983 215 aaKnown RBP13.22□□□□□ -0.29
SNX17-208ENST00000493711 SLC4A11Q8NBS3 891 aa13.22□□□□□ -0.29
SNX17-208ENST00000493711 B3GALNT2Q8NCR0 500 aa13.22□□□□□ -0.29
SNX17-208ENST00000493711 MYCBPAPQ8TBZ2 947 aa13.22□□□□□ -0.29
SNX17-208ENST00000493711 MICAL1Q8TDZ2 1067 aa13.22□□□□□ -0.29
SNX17-208ENST00000493711 WHAMMQ8TF30 809 aa13.22□□□□□ -0.29
SNX17-208ENST00000493711 ARNTL2Q8WYA1 636 aa13.22□□□□□ -0.29
SNX17-208ENST00000493711 TCF25Q9BQ70 676 aa13.22□□□□□ -0.29
SNX17-208ENST00000493711 GPR88Q9GZN0 384 aa13.22□□□□□ -0.29
SNX17-208ENST00000493711 ELOVL4Q9GZR5 314 aa13.22□□□□□ -0.29
SNX17-208ENST00000493711 ZCWPW1Q9H0M4 648 aa13.22□□□□□ -0.29
SNX17-208ENST00000493711 ZNF576Q9H609 170 aa13.22□□□□□ -0.29
SNX17-208ENST00000493711 ALG13Q9NP73 1137 aaKnown RBP13.22□□□□□ -0.29
SNX17-208ENST00000493711 LMCD1Q9NZU5 365 aa13.22□□□□□ -0.29
SNX17-208ENST00000493711 FSCN2O14926 492 aa13.21□□□□□ -0.29
SNX17-208ENST00000493711 CYP26A1O43174 497 aa13.21□□□□□ -0.29
SNX17-208ENST00000493711 LILRB3O75022 631 aa13.21□□□□□ -0.29
SNX17-208ENST00000493711 GFPT2O94808 682 aa13.21□□□□□ -0.29
SNX17-208ENST00000493711 SERPING1P05155 500 aa13.21□□□□□ -0.29
SNX17-208ENST00000493711 ADH1AP07327 375 aa13.21□□□□□ -0.29
SNX17-208ENST00000493711 CD19P15391 556 aa13.21□□□□□ -0.29
SNX17-208ENST00000493711 LMO2P25791 158 aa13.21□□□□□ -0.29
SNX17-208ENST00000493711 PRKCIP41743 596 aa13.21□□□□□ -0.29
SNX17-208ENST00000493711 SLC8A3P57103 927 aa13.21□□□□□ -0.29
SNX17-208ENST00000493711 CDK17Q00537 523 aa13.21□□□□□ -0.29
SNX17-208ENST00000493711 KLHL30Q0D2K2 578 aa13.21□□□□□ -0.29
SNX17-208ENST00000493711 CCDC173Q0VFZ6 552 aa13.21□□□□□ -0.29
SNX17-208ENST00000493711 GPR17Q13304 367 aa13.21□□□□□ -0.29
SNX17-208ENST00000493711 RAB33AQ14088 237 aa13.21□□□□□ -0.29
SNX17-208ENST00000493711 CNGA2Q16280 664 aa13.21□□□□□ -0.29
SNX17-208ENST00000493711 ARHGAP17Q68EM7 881 aa13.21□□□□□ -0.29
SNX17-208ENST00000493711 FAM171BQ6P995 826 aa13.21□□□□□ -0.29
SNX17-208ENST00000493711 ELMSAN1Q6PJG2 1045 aa13.21□□□□□ -0.29
SNX17-208ENST00000493711 ACOT1Q86TX2 421 aa13.21□□□□□ -0.29
SNX17-208ENST00000493711 VPS36Q86VN1 386 aa13.21□□□□□ -0.29
SNX17-208ENST00000493711 FUBP3Q96I24 572 aaKnown RBP eCLIP13.21□□□□□ -0.29
SNX17-208ENST00000493711 PDLIM2Q96JY6 352 aa13.21□□□□□ -0.29
SNX17-208ENST00000493711 RTP3Q9BQQ7 232 aa13.21□□□□□ -0.29
SNX17-208ENST00000493711 ABCB6Q9NP58 842 aa13.21□□□□□ -0.29
SNX17-208ENST00000493711 ABHD10Q9NUJ1 306 aa13.21□□□□□ -0.29
SNX17-208ENST00000493711 HSFX1Q9UBD0 423 aa13.21□□□□□ -0.29
SNX17-208ENST00000493711 DPP7Q9UHL4 492 aa13.21□□□□□ -0.29
SNX17-208ENST00000493711 AJAP1Q9UKB5 411 aaPredicted RBP13.21□□□□□ -0.29
SNX17-208ENST00000493711 FNDC1Q4ZHG4 1894 aaPredicted RBP13.21□□□□□ -0.3
SNX17-208ENST00000493711 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.2□□□□□ -0.3
SNX17-208ENST00000493711 C2CD2LO14523 706 aa13.2□□□□□ -0.3
SNX17-208ENST00000493711 GRM6O15303 877 aa13.2□□□□□ -0.3
SNX17-208ENST00000493711 CPB1P15086 417 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms