RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 GPBP1L1Q9HC44 474 aaPredicted RBP11.86□□□□□ -0.51
SMPD4-218ENST00000482171 POLIQ9UNA4 740 aa11.86□□□□□ -0.51
SMPD4-218ENST00000482171 PRG3Q9Y2Y8 225 aaPredicted RBP11.86□□□□□ -0.51
SMPD4-218ENST00000482171 HAUS5O94927 633 aa11.85□□□□□ -0.51
SMPD4-218ENST00000482171 UPP2O95045 317 aa11.85□□□□□ -0.51
SMPD4-218ENST00000482171 YY1P25490 414 aa11.85□□□□□ -0.51
SMPD4-218ENST00000482171 RFC1P35251 1148 aaPredicted RBP11.85□□□□□ -0.51
SMPD4-218ENST00000482171 SKOR1P84550 965 aa11.85□□□□□ -0.51
SMPD4-218ENST00000482171 BEX3Q00994 111 aa11.85□□□□□ -0.51
SMPD4-218ENST00000482171 ROR1Q01973 937 aa11.85□□□□□ -0.51
SMPD4-218ENST00000482171 PRPSAP1Q14558 356 aa11.85□□□□□ -0.51
SMPD4-218ENST00000482171 AGAP3Q96P47 875 aa11.85□□□□□ -0.51
SMPD4-218ENST00000482171 GANQ9H2C0 597 aa11.85□□□□□ -0.51
SMPD4-218ENST00000482171 SNTG2Q9NY99 539 aa11.85□□□□□ -0.51
SMPD4-218ENST00000482171 ANGPTL2Q9UKU9 493 aa11.85□□□□□ -0.51
SMPD4-218ENST00000482171 MYH13Q9UKX3 1938 aa11.85□□□□□ -0.51
SMPD4-218ENST00000482171 DUOX1Q9NRD9 1551 aa11.85□□□□□ -0.51
SMPD4-218ENST00000482171 CCDC78A2IDD5 438 aa11.85□□□□□ -0.51
SMPD4-218ENST00000482171 RRN3P2A6NIE6 340 aa11.85□□□□□ -0.51
SMPD4-218ENST00000482171 UBOX5O94941 541 aa11.85□□□□□ -0.51
SMPD4-218ENST00000482171 ATP6V1G2O95670 118 aa11.85□□□□□ -0.51
SMPD4-218ENST00000482171 NUMBP49757 651 aa11.85□□□□□ -0.51
SMPD4-218ENST00000482171 GRIK4Q16099 956 aa11.85□□□□□ -0.51
SMPD4-218ENST00000482171 SMC1BQ8NDV3 1235 aa11.85□□□□□ -0.51
SMPD4-218ENST00000482171 PPP4R1Q8TF05 950 aa11.85□□□□□ -0.51
SMPD4-218ENST00000482171 ZNF606Q8WXB4 792 aa11.85□□□□□ -0.51
SMPD4-218ENST00000482171 FAM161BQ96MY7 647 aa11.85□□□□□ -0.51
SMPD4-218ENST00000482171 SYT17Q9BSW7 474 aa11.85□□□□□ -0.51
SMPD4-218ENST00000482171 NUF2Q9BZD4 464 aa11.85□□□□□ -0.51
SMPD4-218ENST00000482171 DDX56Q9NY93 547 aaKnown RBP11.85□□□□□ -0.51
SMPD4-218ENST00000482171 GOLGA8RI6L899 631 aa11.85□□□□□ -0.51
SMPD4-218ENST00000482171 KCNN4O15554 427 aa11.85□□□□□ -0.51
SMPD4-218ENST00000482171 LMNAP02545 664 aaKnown RBP11.85□□□□□ -0.51
SMPD4-218ENST00000482171 APRTP07741 180 aa11.85□□□□□ -0.51
SMPD4-218ENST00000482171 SRGAP2BP0DMP2 458 aa11.85□□□□□ -0.51
SMPD4-218ENST00000482171 MAPTP10636 758 aaKnown RBP11.85□□□□□ -0.51
SMPD4-218ENST00000482171 RBP3P10745 1247 aa11.85□□□□□ -0.51
SMPD4-218ENST00000482171 GZMAP12544 262 aa11.85□□□□□ -0.51
SMPD4-218ENST00000482171 THPOP40225 353 aa11.85□□□□□ -0.51
SMPD4-218ENST00000482171 TPD52P55327 224 aaPredicted RBP11.85□□□□□ -0.51
SMPD4-218ENST00000482171 GTF2BQ00403 316 aa11.85□□□□□ -0.51
SMPD4-218ENST00000482171 AMPD2Q01433 879 aa11.85□□□□□ -0.51
SMPD4-218ENST00000482171 DCAF6Q58WW2 860 aa11.85□□□□□ -0.51
SMPD4-218ENST00000482171 GABPB2Q8TAK5 448 aaPredicted RBP11.85□□□□□ -0.51
SMPD4-218ENST00000482171 CLEC4DQ8WXI8 215 aa11.85□□□□□ -0.51
SMPD4-218ENST00000482171 INPP4AQ96PE3 977 aaPredicted RBP11.85□□□□□ -0.51
SMPD4-218ENST00000482171 RBM15Q96T37 977 aaKnown RBP eCLIP11.85□□□□□ -0.512e-7■■■■□ 19.9
SMPD4-218ENST00000482171 KATNAL1Q9BW62 490 aa11.85□□□□□ -0.51
SMPD4-218ENST00000482171 PORCNQ9H237 461 aa11.85□□□□□ -0.51
SMPD4-218ENST00000482171 PPFIA2O75334 1257 aa11.84□□□□□ -0.51
SMPD4-218ENST00000482171 USP2O75604 605 aaPredicted RBP11.84□□□□□ -0.51
SMPD4-218ENST00000482171 CPB1P15086 417 aa11.84□□□□□ -0.51
SMPD4-218ENST00000482171 NQO1P15559 274 aaKnown RBP11.84□□□□□ -0.51
SMPD4-218ENST00000482171 GNL1P36915 607 aaPredicted RBP11.84□□□□□ -0.51
SMPD4-218ENST00000482171 PIGHQ14442 188 aaPredicted RBP11.84□□□□□ -0.51
SMPD4-218ENST00000482171 AADACL2Q6P093 401 aa11.84□□□□□ -0.51
SMPD4-218ENST00000482171 KDELC2Q7Z4H8 507 aa11.84□□□□□ -0.51
SMPD4-218ENST00000482171 RCOR2Q8IZ40 523 aa11.84□□□□□ -0.51
SMPD4-218ENST00000482171 ST13P4Q8IZP2 240 aaPredicted RBP11.84□□□□□ -0.51
SMPD4-218ENST00000482171 HASPINQ8TF76 798 aa11.84□□□□□ -0.51
SMPD4-218ENST00000482171 CPSF3Q9UKF6 684 aaKnown RBP11.84□□□□□ -0.51
SMPD4-218ENST00000482171 TNFSF9P41273 254 aa11.84□□□□□ -0.51
SMPD4-218ENST00000482171 CTCFP49711 727 aaPredicted RBP11.84□□□□□ -0.51
SMPD4-218ENST00000482171 COPS2P61201 443 aa11.84□□□□□ -0.51
SMPD4-218ENST00000482171 KYAT1Q16773 422 aa11.84□□□□□ -0.51
SMPD4-218ENST00000482171 TMCO4Q5TGY1 634 aa11.84□□□□□ -0.51
SMPD4-218ENST00000482171 NXNQ6DKJ4 435 aa11.84□□□□□ -0.51
SMPD4-218ENST00000482171 USP50Q70EL3 339 aaPredicted RBP11.84□□□□□ -0.51
SMPD4-218ENST00000482171 ZNF677Q86XU0 584 aa11.84□□□□□ -0.51
SMPD4-218ENST00000482171 TTC39CQ8N584 583 aa11.84□□□□□ -0.51
SMPD4-218ENST00000482171 MCUQ8NE86 351 aa11.84□□□□□ -0.51
SMPD4-218ENST00000482171 SPATA18Q8TC71 538 aa11.84□□□□□ -0.51
SMPD4-218ENST00000482171 EPS8L3Q8TE67 593 aaKnown RBP11.84□□□□□ -0.51
SMPD4-218ENST00000482171 MIEF2Q96C03 454 aa11.84□□□□□ -0.51
SMPD4-218ENST00000482171 CENPKQ9BS16 269 aa11.84□□□□□ -0.51
SMPD4-218ENST00000482171 RAB6BQ9NRW1 208 aa11.84□□□□□ -0.51
SMPD4-218ENST00000482171 GPATCH2LQ9NWQ4 482 aa11.84□□□□□ -0.51
SMPD4-218ENST00000482171 WDR35Q9P2L0 1181 aa11.84□□□□□ -0.51
SMPD4-218ENST00000482171 HES2Q9Y543 173 aa11.84□□□□□ -0.51
SMPD4-218ENST00000482171 PJA2O43164 708 aa11.84□□□□□ -0.51
SMPD4-218ENST00000482171 B3GAT3O94766 335 aa11.84□□□□□ -0.51
SMPD4-218ENST00000482171 LGALS2P05162 132 aa11.84□□□□□ -0.51
SMPD4-218ENST00000482171 COILP38432 576 aaPredicted RBP11.84□□□□□ -0.51
SMPD4-218ENST00000482171 CPT1AP50416 773 aa11.84□□□□□ -0.51
SMPD4-218ENST00000482171 TAP1Q03518 808 aa11.84□□□□□ -0.51
SMPD4-218ENST00000482171 EFHC2Q5JST6 749 aa11.84□□□□□ -0.51
SMPD4-218ENST00000482171 FAXCQ5TGI0 409 aa11.84□□□□□ -0.51
SMPD4-218ENST00000482171 PID1Q7Z2X4 250 aa11.84□□□□□ -0.51
SMPD4-218ENST00000482171 FBXO25Q8TCJ0 367 aa11.84□□□□□ -0.51
SMPD4-218ENST00000482171 DEPDC1BQ8WUY9 529 aa11.84□□□□□ -0.51
SMPD4-218ENST00000482171 Q9H521 79 aa11.84□□□□□ -0.51
SMPD4-218ENST00000482171 SLC12A6Q9UHW9 1150 aa11.84□□□□□ -0.51
SMPD4-218ENST00000482171 TIMM13Q9Y5L4 95 aaPredicted RBP11.84□□□□□ -0.51
SMPD4-218ENST00000482171 ARHGEF37A1IGU5 675 aa11.83□□□□□ -0.51
SMPD4-218ENST00000482171 C17orf102A2RUQ5 167 aa11.83□□□□□ -0.51
SMPD4-218ENST00000482171 SULT1E1P49888 294 aa11.83□□□□□ -0.51
SMPD4-218ENST00000482171 SLC26A2P50443 739 aa11.83□□□□□ -0.51
SMPD4-218ENST00000482171 SESN2P58004 480 aaPredicted RBP11.83□□□□□ -0.51
SMPD4-218ENST00000482171 PPIL2Q13356 520 aa11.83□□□□□ -0.51
SMPD4-218ENST00000482171 CAPSQ13938 189 aa11.83□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms