RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 ICAM4Q14773 271 aa7.12□□□□□ -1.27
VPS50-212ENST00000476413 IQCB1Q15051 598 aa7.12□□□□□ -1.27
VPS50-212ENST00000476413 PDCD2Q16342 344 aaPredicted RBP7.12□□□□□ -1.27
VPS50-212ENST00000476413 CCDC38Q502W7 563 aa7.12□□□□□ -1.27
VPS50-212ENST00000476413 PLA1AQ53H76 456 aa7.12□□□□□ -1.27
VPS50-212ENST00000476413 GGT6Q6P531 493 aa7.12□□□□□ -1.27
VPS50-212ENST00000476413 SLC30A10Q6XR72 485 aa7.12□□□□□ -1.27
VPS50-212ENST00000476413 KIAA0408Q6ZU52 694 aa7.12□□□□□ -1.27
VPS50-212ENST00000476413 KRTAP19-1Q8IUB9 90 aa7.12□□□□□ -1.27
VPS50-212ENST00000476413 PPM1EQ8WY54 764 aa7.12□□□□□ -1.27
VPS50-212ENST00000476413 TEPSINQ96N21 525 aa7.12□□□□□ -1.27
VPS50-212ENST00000476413 EIF2AQ9BY44 585 aaKnown RBP7.12□□□□□ -1.27
VPS50-212ENST00000476413 DHX36Q9H2U1 1008 aaKnown RBP7.12□□□□□ -1.27
VPS50-212ENST00000476413 OBP2BQ9NPH6 170 aa7.12□□□□□ -1.27
VPS50-212ENST00000476413 TM7SF3Q9NS93 570 aa7.12□□□□□ -1.27
VPS50-212ENST00000476413 IGSF9Q9P2J2 1179 aa7.12□□□□□ -1.27
VPS50-212ENST00000476413 DNMT3BQ9UBC3 853 aaKnown RBP7.12□□□□□ -1.27
VPS50-212ENST00000476413 DKK4Q9UBT3 224 aa7.12□□□□□ -1.27
VPS50-212ENST00000476413 HDAC9Q9UKV0 1011 aa7.12□□□□□ -1.27
VPS50-212ENST00000476413 LOC102723971A0A1B0GUV8 181 aa7.11□□□□□ -1.27
VPS50-212ENST00000476413 GOLGA6L6A8MZA4 724 aa7.11□□□□□ -1.27
VPS50-212ENST00000476413 AHRRA9YTQ3 701 aa7.11□□□□□ -1.27
VPS50-212ENST00000476413 H7C4K7 107 aa7.11□□□□□ -1.27
VPS50-212ENST00000476413 PODXLO00592 558 aa7.11□□□□□ -1.27
VPS50-212ENST00000476413 CCP110O43303 1012 aa7.11□□□□□ -1.27
VPS50-212ENST00000476413 TLR5O60602 858 aa7.11□□□□□ -1.27
VPS50-212ENST00000476413 ZNF623O75123 536 aa7.11□□□□□ -1.27
VPS50-212ENST00000476413 ITGB3P05106 788 aa7.11□□□□□ -1.27
VPS50-212ENST00000476413 XRCC6P12956 609 aaKnown RBP eCLIP7.11□□□□□ -1.27
VPS50-212ENST00000476413 LILRA4P59901 499 aa7.11□□□□□ -1.27
VPS50-212ENST00000476413 HSD11B2P80365 405 aa7.11□□□□□ -1.27
VPS50-212ENST00000476413 ZNF844Q08AG5 666 aa7.11□□□□□ -1.27
VPS50-212ENST00000476413 SLC29A2Q14542 456 aa7.11□□□□□ -1.27
VPS50-212ENST00000476413 RAB30Q15771 203 aa7.11□□□□□ -1.27
VPS50-212ENST00000476413 PFKFB4Q16877 469 aa7.11□□□□□ -1.27
VPS50-212ENST00000476413 ZACNQ401N2 412 aa7.11□□□□□ -1.27
VPS50-212ENST00000476413 PLAG1Q6DJT9 500 aa7.11□□□□□ -1.27
VPS50-212ENST00000476413 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.11□□□□□ -1.27
VPS50-212ENST00000476413 LDHAL6AQ6ZMR3 332 aa7.11□□□□□ -1.27
VPS50-212ENST00000476413 KCTD20Q7Z5Y7 419 aa7.11□□□□□ -1.27
VPS50-212ENST00000476413 IPCEF1Q8WWN9 437 aaPredicted RBP7.11□□□□□ -1.27
VPS50-212ENST00000476413 MUL1Q969V5 352 aa7.11□□□□□ -1.27
VPS50-212ENST00000476413 PPP1R9BQ96SB3 815 aa7.11□□□□□ -1.27
VPS50-212ENST00000476413 MAGEB5Q9BZ81 275 aa7.11□□□□□ -1.27
VPS50-212ENST00000476413 REXO4Q9GZR2 422 aaKnown RBP7.11□□□□□ -1.27
VPS50-212ENST00000476413 RNPEPQ9H4A4 650 aa7.11□□□□□ -1.27
VPS50-212ENST00000476413 ZCCHC4Q9H5U6 513 aa7.11□□□□□ -1.27
VPS50-212ENST00000476413 RGL1Q9NZL6 768 aa7.11□□□□□ -1.27
VPS50-212ENST00000476413 hCG_1642624A0A1W2PR95 340 aa7.1□□□□□ -1.27
VPS50-212ENST00000476413 KRTAP23-1A1A580 65 aa7.1□□□□□ -1.27
VPS50-212ENST00000476413 AQP12BA6NM10 295 aa7.1□□□□□ -1.27
VPS50-212ENST00000476413 LGALS16A8MUM7 142 aa7.1□□□□□ -1.27
VPS50-212ENST00000476413 DIRC3C9JPN6 131 aa7.1□□□□□ -1.27
VPS50-212ENST00000476413 RAB27BO00194 218 aa7.1□□□□□ -1.27
VPS50-212ENST00000476413 SKAP2O75563 359 aaPredicted RBP7.1□□□□□ -1.27
VPS50-212ENST00000476413 ATXN1LP0C7T5 689 aaKnown RBP7.1□□□□□ -1.27
VPS50-212ENST00000476413 KCNA2P16389 499 aa7.1□□□□□ -1.27
VPS50-212ENST00000476413 GCLCP48506 637 aaPredicted RBP7.1□□□□□ -1.27
VPS50-212ENST00000476413 CPT1AP50416 773 aa7.1□□□□□ -1.27
VPS50-212ENST00000476413 COPAP53621 1224 aa7.1□□□□□ -1.27
VPS50-212ENST00000476413 JAG1P78504 1218 aa7.1□□□□□ -1.27
VPS50-212ENST00000476413 ARHGEF7Q14155 803 aa7.1□□□□□ -1.27
VPS50-212ENST00000476413 B3GNTL1Q67FW5 361 aaPredicted RBP7.1□□□□□ -1.27
VPS50-212ENST00000476413 USP49Q70CQ1 688 aa7.1□□□□□ -1.27
VPS50-212ENST00000476413 IPO4Q8TEX9 1081 aaKnown RBP7.1□□□□□ -1.27
VPS50-212ENST00000476413 EDAQ92838 391 aa7.1□□□□□ -1.27
VPS50-212ENST00000476413 MOGAT1Q96PD6 335 aa7.1□□□□□ -1.27
VPS50-212ENST00000476413 RMDN3Q96TC7 470 aa7.1□□□□□ -1.27
VPS50-212ENST00000476413 NECTIN3Q9NQS3 549 aa7.1□□□□□ -1.27
VPS50-212ENST00000476413 GRHPRQ9UBQ7 328 aa7.1□□□□□ -1.27
VPS50-212ENST00000476413 RAD54BQ9Y620 910 aa7.1□□□□□ -1.27
VPS50-212ENST00000476413 DGKBQ9Y6T7 804 aa7.1□□□□□ -1.27
VPS50-212ENST00000476413 MARCH11A6NNE9 402 aa7.09□□□□□ -1.27
VPS50-212ENST00000476413 SYT5O00445 386 aa7.09□□□□□ -1.27
VPS50-212ENST00000476413 RRP9O43818 475 aaKnown RBP7.09□□□□□ -1.27
VPS50-212ENST00000476413 SPATA31D3P0C874 917 aa7.09□□□□□ -1.27
VPS50-212ENST00000476413 PAX3P23760 479 aa7.09□□□□□ -1.27
VPS50-212ENST00000476413 HIBADHP31937 336 aaKnown RBP7.09□□□□□ -1.27
VPS50-212ENST00000476413 RENBPP51606 427 aa7.09□□□□□ -1.27
VPS50-212ENST00000476413 LOXL3P58215 753 aa7.09□□□□□ -1.27
VPS50-212ENST00000476413 SPARCL1Q14515 664 aa7.09□□□□□ -1.27
VPS50-212ENST00000476413 RRP1BQ14684 758 aaKnown RBP7.09□□□□□ -1.27
VPS50-212ENST00000476413 CRTC1Q6UUV9 634 aa7.09□□□□□ -1.27
VPS50-212ENST00000476413 SPATA31D4Q6ZUB0 917 aa7.09□□□□□ -1.27
VPS50-212ENST00000476413 MAPKAPK5Q8IW41 473 aa7.09□□□□□ -1.27
VPS50-212ENST00000476413 FAM89AQ96GI7 184 aa7.09□□□□□ -1.27
VPS50-212ENST00000476413 MED15Q96RN5 788 aa7.09□□□□□ -1.27
VPS50-212ENST00000476413 DCLRE1CQ96SD1 692 aaKnown RBP7.09□□□□□ -1.27
VPS50-212ENST00000476413 ISCA1Q9BUE6 129 aa7.09□□□□□ -1.27
VPS50-212ENST00000476413 KRTAP9-9Q9BYP9 154 aa7.09□□□□□ -1.27
VPS50-212ENST00000476413 KRTAP9-4Q9BYQ2 154 aa7.09□□□□□ -1.27
VPS50-212ENST00000476413 GOLGA2P5Q9HBQ8 144 aa7.09□□□□□ -1.27
VPS50-212ENST00000476413 GPR52Q9Y2T5 361 aa7.09□□□□□ -1.27
VPS50-212ENST00000476413 E7ENX8 843 aa7.08□□□□□ -1.28
VPS50-212ENST00000476413 ACKR2O00590 384 aa7.08□□□□□ -1.28
VPS50-212ENST00000476413 TRIM24O15164 1050 aa7.08□□□□□ -1.28
VPS50-212ENST00000476413 CYP27B1O15528 508 aa7.08□□□□□ -1.28
VPS50-212ENST00000476413 SERPINF1P36955 418 aa7.08□□□□□ -1.28
VPS50-212ENST00000476413 PTDSS1P48651 473 aaKnown RBP7.08□□□□□ -1.28
VPS50-212ENST00000476413 ANXA11P50995 505 aaKnown RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms