RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 SGSM1Q2NKQ1 1148 aa12.97□□□□□ -0.33
USP11-206ENST00000469080 EEF1DP3Q658K8 133 aa12.97□□□□□ -0.33
USP11-206ENST00000469080 SLC39A4Q6P5W5 647 aa12.97□□□□□ -0.33
USP11-206ENST00000469080 ZC3H18Q86VM9 953 aaKnown RBP12.97□□□□□ -0.33
USP11-206ENST00000469080 RBBP8NLQ8NC74 664 aaPredicted RBP12.97□□□□□ -0.33
USP11-206ENST00000469080 FBXO25Q8TCJ0 367 aa12.97□□□□□ -0.33
USP11-206ENST00000469080 HSPH1Q92598 858 aa12.97□□□□□ -0.33
USP11-206ENST00000469080 ZMAT2Q96NC0 199 aaKnown RBP12.97□□□□□ -0.33
USP11-206ENST00000469080 FDXACB1Q9BRP7 624 aaPredicted RBP12.97□□□□□ -0.33
USP11-206ENST00000469080 MIS12Q9H081 205 aa12.97□□□□□ -0.33
USP11-206ENST00000469080 PFDN4Q9NQP4 134 aa12.97□□□□□ -0.33
USP11-206ENST00000469080 CPA4Q9UI42 421 aa12.97□□□□□ -0.33
USP11-206ENST00000469080 TRIM33Q9UPN9 1127 aa12.97□□□□□ -0.33
USP11-206ENST00000469080 SNCAIPQ9Y6H5 919 aa12.97□□□□□ -0.33
USP11-206ENST00000469080 TNS1Q9HBL0 1735 aaKnown RBP12.97□□□□□ -0.33
USP11-206ENST00000469080 GSTA1P08263 222 aa12.97□□□□□ -0.33
USP11-206ENST00000469080 ZNF699Q32M78 642 aa12.97□□□□□ -0.33
USP11-206ENST00000469080 SMUG1Q53HV7 270 aa12.97□□□□□ -0.33
USP11-206ENST00000469080 TMEM53Q6P2H8 277 aa12.97□□□□□ -0.33
USP11-206ENST00000469080 KCNN1Q92952 543 aa12.97□□□□□ -0.33
USP11-206ENST00000469080 GPRASP2Q96D09 838 aa12.97□□□□□ -0.33
USP11-206ENST00000469080 HEXIM2Q96MH2 286 aaKnown RBP12.97□□□□□ -0.33
USP11-206ENST00000469080 MCEEQ96PE7 176 aa12.97□□□□□ -0.33
USP11-206ENST00000469080 NKX1-2Q9UD57 310 aaPredicted RBP12.97□□□□□ -0.33
USP11-206ENST00000469080 DBR1Q9UK59 544 aaKnown RBP12.97□□□□□ -0.33
USP11-206ENST00000469080 PFASO15067 1338 aa12.96□□□□□ -0.33
USP11-206ENST00000469080 POLR2AP24928 1970 aaKnown RBP12.96□□□□□ -0.33
USP11-206ENST00000469080 SOWAHBA6NEL2 793 aa12.96□□□□□ -0.33
USP11-206ENST00000469080 CSPG5O95196 566 aa12.96□□□□□ -0.33
USP11-206ENST00000469080 PDGFRBP09619 1106 aa12.96□□□□□ -0.33
USP11-206ENST00000469080 DRD4P21917 467 aa12.96□□□□□ -0.33
USP11-206ENST00000469080 PPP2R2AP63151 447 aa12.96□□□□□ -0.33
USP11-206ENST00000469080 PLOD1Q02809 727 aaPredicted RBP12.96□□□□□ -0.33
USP11-206ENST00000469080 CCDC6Q16204 474 aa12.96□□□□□ -0.33
USP11-206ENST00000469080 FOXB2Q5VYV0 432 aa12.96□□□□□ -0.33
USP11-206ENST00000469080 ILDR2Q71H61 639 aa12.96□□□□□ -0.33
USP11-206ENST00000469080 C9orf72Q96LT7 481 aa12.96□□□□□ -0.33
USP11-206ENST00000469080 TMEM8AQ9HCN3 771 aa12.96□□□□□ -0.33
USP11-206ENST00000469080 POC1B-GALNT4F8VUJ3 575 aa12.96□□□□□ -0.33
USP11-206ENST00000469080 ABLIM1O14639 778 aa12.96□□□□□ -0.33
USP11-206ENST00000469080 EPHX2P34913 555 aa12.96□□□□□ -0.33
USP11-206ENST00000469080 MAGOHP61326 146 aaKnown RBP12.96□□□□□ -0.33
USP11-206ENST00000469080 CAPSQ13938 189 aa12.96□□□□□ -0.33
USP11-206ENST00000469080 TDRD10Q5VZ19 366 aaKnown RBP12.96□□□□□ -0.33
USP11-206ENST00000469080 SLC15A3Q8IY34 581 aa12.96□□□□□ -0.33
USP11-206ENST00000469080 PBKQ96KB5 322 aa12.96□□□□□ -0.33
USP11-206ENST00000469080 INPP4AQ96PE3 977 aaPredicted RBP12.96□□□□□ -0.33
USP11-206ENST00000469080 DDX50Q9BQ39 737 aaKnown RBP12.96□□□□□ -0.33
USP11-206ENST00000469080 RNPEPQ9H4A4 650 aa12.96□□□□□ -0.33
USP11-206ENST00000469080 PARP2Q9UGN5 583 aa12.96□□□□□ -0.33
USP11-206ENST00000469080 RASAL2Q9UJF2 1139 aa12.96□□□□□ -0.33
USP11-206ENST00000469080 PTPRJQ12913 1337 aa12.96□□□□□ -0.34
USP11-206ENST00000469080 CCDC166P0CW27 439 aa12.96□□□□□ -0.34
USP11-206ENST00000469080 PEX5P50542 639 aa12.96□□□□□ -0.34
USP11-206ENST00000469080 LIN9Q5TKA1 542 aa12.96□□□□□ -0.34
USP11-206ENST00000469080 EXOC3L1Q86VI1 746 aa12.96□□□□□ -0.34
USP11-206ENST00000469080 GPC2Q8N158 579 aa12.96□□□□□ -0.34
USP11-206ENST00000469080 MKNK1Q9BUB5 465 aa12.96□□□□□ -0.34
USP11-206ENST00000469080 FAM114A2Q9NRY5 505 aa12.96□□□□□ -0.34
USP11-206ENST00000469080 ANKEF1Q9NU02 776 aa12.96□□□□□ -0.34
USP11-206ENST00000469080 SLC12A4Q9UP95 1085 aa12.96□□□□□ -0.34
USP11-206ENST00000469080 CCL15-CCL14A0A0B4J2E2 113 aa12.95□□□□□ -0.34
USP11-206ENST00000469080 TMEM247A6NEH6 219 aa12.95□□□□□ -0.34
USP11-206ENST00000469080 CTSHP09668 335 aa12.95□□□□□ -0.34
USP11-206ENST00000469080 ZCCHC18P0CG32 403 aa12.95□□□□□ -0.34
USP11-206ENST00000469080 NAT2P11245 290 aa12.95□□□□□ -0.34
USP11-206ENST00000469080 MYCLP1P12525 358 aaPredicted RBP12.95□□□□□ -0.34
USP11-206ENST00000469080 HDAC4P56524 1084 aa12.95□□□□□ -0.34
USP11-206ENST00000469080 ZNF280AP59817 542 aaPredicted RBP12.95□□□□□ -0.34
USP11-206ENST00000469080 NCALDP61601 193 aa12.95□□□□□ -0.34
USP11-206ENST00000469080 RPL7AP62424 266 aaKnown RBP12.95□□□□□ -0.34
USP11-206ENST00000469080 GTF2BQ00403 316 aa12.95□□□□□ -0.34
USP11-206ENST00000469080 CCL15Q16663 113 aa12.95□□□□□ -0.34
USP11-206ENST00000469080 THOC7Q6I9Y2 204 aaKnown RBP12.95□□□□□ -0.34
USP11-206ENST00000469080 ZNF554Q86TJ5 538 aa12.95□□□□□ -0.34
USP11-206ENST00000469080 CCDC125Q86Z20 511 aa12.95□□□□□ -0.34
USP11-206ENST00000469080 ZNF516Q92618 1163 aa12.95□□□□□ -0.34
USP11-206ENST00000469080 GMEB1Q9Y692 573 aa12.95□□□□□ -0.34
USP11-206ENST00000469080 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.95□□□□□ -0.34
USP11-206ENST00000469080 FZD9O00144 591 aa12.95□□□□□ -0.34
USP11-206ENST00000469080 TNNC2P02585 160 aa12.95□□□□□ -0.34
USP11-206ENST00000469080 KRT1P04264 644 aa12.95□□□□□ -0.34
USP11-206ENST00000469080 UBTFL6P0CB48 400 aaPredicted RBP12.95□□□□□ -0.34
USP11-206ENST00000469080 FMO1Q01740 532 aa12.95□□□□□ -0.34
USP11-206ENST00000469080 LAMTOR4Q0VGL1 99 aa12.95□□□□□ -0.34
USP11-206ENST00000469080 MAP7Q14244 749 aa12.95□□□□□ -0.34
USP11-206ENST00000469080 ANKRD13AQ8IZ07 590 aa12.95□□□□□ -0.34
USP11-206ENST00000469080 MMGT1Q8N4V1 131 aa12.95□□□□□ -0.34
USP11-206ENST00000469080 GDAP1Q8TB36 358 aa12.95□□□□□ -0.34
USP11-206ENST00000469080 SPATA17Q96L03 361 aa12.95□□□□□ -0.34
USP11-206ENST00000469080 MPHOSPH6Q99547 160 aaKnown RBP12.95□□□□□ -0.34
USP11-206ENST00000469080 PJA2O43164 708 aa12.94□□□□□ -0.34
USP11-206ENST00000469080 ITGB3P05106 788 aa12.94□□□□□ -0.34
USP11-206ENST00000469080 TMEM253P0C7T8 217 aa12.94□□□□□ -0.34
USP11-206ENST00000469080 INSRRP14616 1297 aa12.94□□□□□ -0.34
USP11-206ENST00000469080 ZNF131P52739 623 aa12.94□□□□□ -0.34
USP11-206ENST00000469080 RNASELQ05823 741 aaKnown RBP12.94□□□□□ -0.34
USP11-206ENST00000469080 ITGA7Q13683 1181 aa12.94□□□□□ -0.34
USP11-206ENST00000469080 RCN1Q15293 331 aa12.94□□□□□ -0.34
USP11-206ENST00000469080 CNPY1Q3B7I2 92 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms