RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	OR5B17	Q8NGF7	314 aa		13.65	□□□□□ -0.22
FDPS-204	ENST00000461507	OR10T2	Q8NGX3	314 aa		13.65	□□□□□ -0.22
FDPS-204	ENST00000461507	SHKBP1	Q8TBC3	707 aa		13.65	□□□□□ -0.22
FDPS-204	ENST00000461507	DEPDC1B	Q8WUY9	529 aa		13.65	□□□□□ -0.22
FDPS-204	ENST00000461507	CLDN23	Q96B33	292 aa		13.65	□□□□□ -0.22
FDPS-204	ENST00000461507	EEF2KMT	Q96G04	330 aa		13.65	□□□□□ -0.22
FDPS-204	ENST00000461507	BORCS6	Q96GS4	357 aa		13.65	□□□□□ -0.22
FDPS-204	ENST00000461507	GPR88	Q9GZN0	384 aa		13.65	□□□□□ -0.22
FDPS-204	ENST00000461507	ZFP14	Q9HCL3	533 aa		13.65	□□□□□ -0.22
FDPS-204	ENST00000461507	INTS13	Q9NVM9	706 aa		13.65	□□□□□ -0.22
FDPS-204	ENST00000461507	DSE	Q9UL01	958 aa		13.65	□□□□□ -0.22
FDPS-204	ENST00000461507	ASB3	Q9Y575	518 aa		13.65	□□□□□ -0.22
FDPS-204	ENST00000461507	NCAN	O14594	1321 aa		13.64	□□□□□ -0.23
FDPS-204	ENST00000461507	PTPRJ	Q12913	1337 aa		13.64	□□□□□ -0.23
FDPS-204	ENST00000461507	VPS13A	Q96RL7	3174 aa		13.64	□□□□□ -0.23
FDPS-204	ENST00000461507	KPNA7	A9QM74	516 aa		13.64	□□□□□ -0.23
FDPS-204	ENST00000461507	PSMA7	O14818	248 aa		13.64	□□□□□ -0.23
FDPS-204	ENST00000461507	LRRN2	O75325	713 aa		13.64	□□□□□ -0.23
FDPS-204	ENST00000461507	TARS	P26639	723 aa	Known RBP	13.64	□□□□□ -0.23
FDPS-204	ENST00000461507	RPS9	P46781	194 aa	Known RBP	13.64	□□□□□ -0.23
FDPS-204	ENST00000461507	DUSP4	Q13115	394 aa		13.64	□□□□□ -0.23
FDPS-204	ENST00000461507	ADAM9	Q13443	819 aa		13.64	□□□□□ -0.23
FDPS-204	ENST00000461507	VIT	Q6UXI7	678 aa		13.64	□□□□□ -0.23
FDPS-204	ENST00000461507	FAM186B	Q8IYM0	893 aa		13.64	□□□□□ -0.23
FDPS-204	ENST00000461507	MAML2	Q8IZL2	1156 aa	Predicted RBP	13.64	□□□□□ -0.23
FDPS-204	ENST00000461507	PSMG2	Q969U7	264 aa		13.64	□□□□□ -0.23
FDPS-204	ENST00000461507	ZSWIM3	Q96MP5	696 aa		13.64	□□□□□ -0.23
FDPS-204	ENST00000461507	PGLYRP2	Q96PD5	576 aa		13.64	□□□□□ -0.23
FDPS-204	ENST00000461507	NELL2	Q99435	816 aa		13.64	□□□□□ -0.23
FDPS-204	ENST00000461507	GTPBP4	Q9BZE4	634 aa	Known RBP	13.64	□□□□□ -0.23
FDPS-204	ENST00000461507	ZCWPW1	Q9H0M4	648 aa		13.64	□□□□□ -0.23
FDPS-204	ENST00000461507	NUP62CL	Q9H1M0	184 aa		13.64	□□□□□ -0.23
FDPS-204	ENST00000461507	CTNND2	Q9UQB3	1225 aa		13.64	□□□□□ -0.23
FDPS-204	ENST00000461507	SNX9	Q9Y5X1	595 aa		13.64	□□□□□ -0.23
FDPS-204	ENST00000461507	CFAP54	Q96N23	3096 aa		13.63	□□□□□ -0.23
FDPS-204	ENST00000461507	GPR179	Q6PRD1	2367 aa		13.63	□□□□□ -0.23
FDPS-204	ENST00000461507	TRIM49B	A6NDI0	452 aa		13.63	□□□□□ -0.23
FDPS-204	ENST00000461507	ARNTL	O00327	626 aa		13.63	□□□□□ -0.23
FDPS-204	ENST00000461507	CETN3	O15182	167 aa		13.63	□□□□□ -0.23
FDPS-204	ENST00000461507	HUS1	O60921	280 aa		13.63	□□□□□ -0.23
FDPS-204	ENST00000461507	SP9	P0CG40	484 aa		13.63	□□□□□ -0.23
FDPS-204	ENST00000461507	EPB41	P11171	864 aa	Known RBP	13.63	□□□□□ -0.23
FDPS-204	ENST00000461507	MYL4	P12829	197 aa		13.63	□□□□□ -0.23
FDPS-204	ENST00000461507	PSMC3	P17980	439 aa		13.63	□□□□□ -0.23
FDPS-204	ENST00000461507	CDR1	P51861	262 aa		13.63	□□□□□ -0.23
FDPS-204	ENST00000461507	EPHB3	P54753	998 aa		13.63	□□□□□ -0.23
FDPS-204	ENST00000461507	FZD5	Q13467	585 aa		13.63	□□□□□ -0.23
FDPS-204	ENST00000461507	TEAD2	Q15562	447 aa		13.63	□□□□□ -0.23
FDPS-204	ENST00000461507	ZNF528	Q3MIS6	628 aa		13.63	□□□□□ -0.23
FDPS-204	ENST00000461507	TCERG1L	Q5VWI1	586 aa		13.63	□□□□□ -0.23
FDPS-204	ENST00000461507	TPRG1	Q6ZUI0	275 aa		13.63	□□□□□ -0.23
FDPS-204	ENST00000461507	TRAPPC11	Q7Z392	1133 aa		13.63	□□□□□ -0.23
FDPS-204	ENST00000461507	THEM5	Q8N1Q8	247 aa		13.63	□□□□□ -0.23
FDPS-204	ENST00000461507	TTC9B	Q8N6N2	239 aa		13.63	□□□□□ -0.23
FDPS-204	ENST00000461507	ATAD1	Q8NBU5	361 aa		13.63	□□□□□ -0.23
FDPS-204	ENST00000461507	CXorf38	Q8TB03	319 aa		13.63	□□□□□ -0.23
FDPS-204	ENST00000461507	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	13.63	□□□□□ -0.23
FDPS-204	ENST00000461507	C2orf15	Q8WU43	125 aa	Known RBP	13.63	□□□□□ -0.23
FDPS-204	ENST00000461507	E2F7	Q96AV8	911 aa		13.63	□□□□□ -0.23
FDPS-204	ENST00000461507	HPDL	Q96IR7	371 aa		13.63	□□□□□ -0.23
FDPS-204	ENST00000461507	TMEM209	Q96SK2	561 aa		13.63	□□□□□ -0.23
FDPS-204	ENST00000461507	MMS19	Q96T76	1030 aa		13.63	□□□□□ -0.23
FDPS-204	ENST00000461507	MKNK1	Q9BUB5	465 aa		13.63	□□□□□ -0.23
FDPS-204	ENST00000461507	TRMT61B	Q9BVS5	477 aa	Known RBP	13.63	□□□□□ -0.23
FDPS-204	ENST00000461507	BCO2	Q9BYV7	579 aa		13.63	□□□□□ -0.23
FDPS-204	ENST00000461507	FBXO4	Q9UKT5	387 aa		13.63	□□□□□ -0.23
FDPS-204	ENST00000461507	TRAF3IP3	Q9Y228	551 aa		13.63	□□□□□ -0.23
FDPS-204	ENST00000461507	MTF2	Q9Y483	593 aa	Predicted RBP	13.63	□□□□□ -0.23
FDPS-204	ENST00000461507	LRRIQ3	A6PVS8	624 aa	Predicted RBP	13.62	□□□□□ -0.23
FDPS-204	ENST00000461507	FGF19	O95750	216 aa		13.62	□□□□□ -0.23
FDPS-204	ENST00000461507	TRIM49	P0CI25	452 aa		13.62	□□□□□ -0.23
FDPS-204	ENST00000461507	TRIM49C	P0CI26	452 aa		13.62	□□□□□ -0.23
FDPS-204	ENST00000461507	GJA1	P17302	382 aa		13.62	□□□□□ -0.23
FDPS-204	ENST00000461507	WEE1	P30291	646 aa		13.62	□□□□□ -0.23
FDPS-204	ENST00000461507	PSMC2	P35998	433 aa	Known RBP	13.62	□□□□□ -0.23
FDPS-204	ENST00000461507	PPP1R2	P41236	205 aa		13.62	□□□□□ -0.23
FDPS-204	ENST00000461507	PIK3CA	P42336	1068 aa		13.62	□□□□□ -0.23
FDPS-204	ENST00000461507	ALDH1A3	P47895	512 aa		13.62	□□□□□ -0.23
FDPS-204	ENST00000461507	MLLT6	P55198	1093 aa	Predicted RBP	13.62	□□□□□ -0.23
FDPS-204	ENST00000461507	STX17	P56962	302 aa		13.62	□□□□□ -0.23
FDPS-204	ENST00000461507	TNNC1	P63316	161 aa		13.62	□□□□□ -0.23
FDPS-204	ENST00000461507	FCHO2	Q0JRZ9	810 aa		13.62	□□□□□ -0.23
FDPS-204	ENST00000461507	SMARCB1	Q12824	385 aa		13.62	□□□□□ -0.23
FDPS-204	ENST00000461507	GRM2	Q14416	872 aa		13.62	□□□□□ -0.23
FDPS-204	ENST00000461507	UBXN2B	Q14CS0	331 aa		13.62	□□□□□ -0.23
FDPS-204	ENST00000461507	DCAF17	Q5H9S7	520 aa	Predicted RBP	13.62	□□□□□ -0.23
FDPS-204	ENST00000461507	WSCD1	Q658N2	575 aa		13.62	□□□□□ -0.23
FDPS-204	ENST00000461507	ZC3H14	Q6PJT7	736 aa	Known RBP	13.62	□□□□□ -0.23
FDPS-204	ENST00000461507	GAREM2	Q75VX8	874 aa		13.62	□□□□□ -0.23
FDPS-204	ENST00000461507	SLC9A9	Q8IVB4	645 aa		13.62	□□□□□ -0.23
FDPS-204	ENST00000461507	MFSD6L	Q8IWD5	586 aa		13.62	□□□□□ -0.23
FDPS-204	ENST00000461507	ELOA2	Q8IYF1	753 aa	Predicted RBP	13.62	□□□□□ -0.23
FDPS-204	ENST00000461507	LRRC52	Q8N7C0	313 aa		13.62	□□□□□ -0.23
FDPS-204	ENST00000461507	NELFB	Q8WX92	580 aa		13.62	□□□□□ -0.23
FDPS-204	ENST00000461507	NELL1	Q92832	810 aa		13.62	□□□□□ -0.23
FDPS-204	ENST00000461507	IRF7	Q92985	503 aa		13.62	□□□□□ -0.23
FDPS-204	ENST00000461507	CLSTN2	Q9H4D0	955 aa		13.62	□□□□□ -0.23
FDPS-204	ENST00000461507	BRD9	Q9H8M2	597 aa		13.62	□□□□□ -0.23
FDPS-204	ENST00000461507	ZNF334	Q9HCZ1	680 aa	Predicted RBP	13.62	□□□□□ -0.23
FDPS-204	ENST00000461507	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	13.62	□□□□□ -0.23	6e-8	■■■■■ 108.4

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms