RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 DGKEP52429 567 aa18.62■□□□□ 0.57
UBE2D4-209ENST00000454428 PPP2R3AQ06190 1150 aa18.62■□□□□ 0.57
UBE2D4-209ENST00000454428 VEPH1Q14D04 833 aa18.62■□□□□ 0.57
UBE2D4-209ENST00000454428 ANKRD1Q15327 319 aa18.62■□□□□ 0.57
UBE2D4-209ENST00000454428 MMTAG2Q9BU76 263 aaKnown RBP18.62■□□□□ 0.57
UBE2D4-209ENST00000454428 TPSD1Q9BZJ3 242 aa18.62■□□□□ 0.57
UBE2D4-209ENST00000454428 ECT2Q9H8V3 914 aa18.62■□□□□ 0.57
UBE2D4-209ENST00000454428 ZMYM5Q9UJ78 669 aa18.62■□□□□ 0.57
UBE2D4-209ENST00000454428 KLK13Q9UKR3 277 aa18.62■□□□□ 0.57
UBE2D4-209ENST00000454428 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.62■□□□□ 0.57
UBE2D4-209ENST00000454428 TAF4O00268 1085 aa18.61■□□□□ 0.57
UBE2D4-209ENST00000454428 TADA3O75528 432 aa18.61■□□□□ 0.57
UBE2D4-209ENST00000454428 CAPNS1P04632 268 aa18.61■□□□□ 0.57
UBE2D4-209ENST00000454428 PLS3P13797 630 aa18.61■□□□□ 0.57
UBE2D4-209ENST00000454428 GUCY2CP25092 1073 aa18.61■□□□□ 0.57
UBE2D4-209ENST00000454428 CDC25AP30304 524 aa18.61■□□□□ 0.57
UBE2D4-209ENST00000454428 AMPD2Q01433 879 aa18.61■□□□□ 0.57
UBE2D4-209ENST00000454428 RAD51AP2Q09MP3 1159 aa18.61■□□□□ 0.57
UBE2D4-209ENST00000454428 BFSP1Q12934 665 aa18.61■□□□□ 0.57
UBE2D4-209ENST00000454428 ZNF268Q14587 947 aaPredicted RBP18.61■□□□□ 0.57
UBE2D4-209ENST00000454428 PDGFRLQ15198 375 aa18.61■□□□□ 0.57
UBE2D4-209ENST00000454428 IL17AQ16552 155 aa18.61■□□□□ 0.57
UBE2D4-209ENST00000454428 C9orf57Q5W0N0 161 aa18.61■□□□□ 0.57
UBE2D4-209ENST00000454428 RASSF3Q86WH2 238 aa18.61■□□□□ 0.57
UBE2D4-209ENST00000454428 KIF9Q9HAQ2 790 aa18.61■□□□□ 0.57
UBE2D4-209ENST00000454428 NEUROG3Q9Y4Z2 214 aa18.61■□□□□ 0.57
UBE2D4-209ENST00000454428 ANO9A1A5B4 782 aa18.6■□□□□ 0.57
UBE2D4-209ENST00000454428 DDX6P26196 483 aaKnown RBP eCLIP18.6■□□□□ 0.57
UBE2D4-209ENST00000454428 GPR15P49685 360 aa18.6■□□□□ 0.57
UBE2D4-209ENST00000454428 ZNF77Q15935 545 aa18.6■□□□□ 0.57
UBE2D4-209ENST00000454428 UAP1L1Q3KQV9 507 aa18.6■□□□□ 0.57
UBE2D4-209ENST00000454428 JADE1Q6IE81 842 aa18.6■□□□□ 0.57
UBE2D4-209ENST00000454428 CYP2U1Q7Z449 544 aa18.6■□□□□ 0.57
UBE2D4-209ENST00000454428 MON1AQ86VX9 555 aa18.6■□□□□ 0.57
UBE2D4-209ENST00000454428 CD101Q93033 1021 aa18.6■□□□□ 0.57
UBE2D4-209ENST00000454428 ACDQ96AP0 544 aa18.6■□□□□ 0.57
UBE2D4-209ENST00000454428 MSRB2Q9Y3D2 182 aa18.6■□□□□ 0.57
UBE2D4-209ENST00000454428 TCHHQ07283 1943 aa18.6■□□□□ 0.57
UBE2D4-209ENST00000454428 ANAPC1Q9H1A4 1944 aa18.6■□□□□ 0.57
UBE2D4-209ENST00000454428 PI4KAP42356 2102 aa18.59■□□□□ 0.57
UBE2D4-209ENST00000454428 ADAMTS20P59510 1910 aa18.59■□□□□ 0.57
UBE2D4-209ENST00000454428 NFICP08651 508 aa18.59■□□□□ 0.57
UBE2D4-209ENST00000454428 MATR3P43243 847 aaKnown RBP eCLIP18.59■□□□□ 0.57
UBE2D4-209ENST00000454428 MTF1Q14872 753 aa18.59■□□□□ 0.57
UBE2D4-209ENST00000454428 EML3Q32P44 896 aa18.59■□□□□ 0.57
UBE2D4-209ENST00000454428 CC2D1AQ6P1N0 951 aaPredicted RBP18.59■□□□□ 0.57
UBE2D4-209ENST00000454428 CPA6Q8N4T0 437 aa18.59■□□□□ 0.57
UBE2D4-209ENST00000454428 TSTD1Q8NFU3 115 aa18.59■□□□□ 0.57
UBE2D4-209ENST00000454428 SPPL2BQ8TCT7 592 aa18.59■□□□□ 0.57
UBE2D4-209ENST00000454428 USP33Q8TEY7 942 aa18.59■□□□□ 0.57
UBE2D4-209ENST00000454428 C2orf15Q8WU43 125 aaKnown RBP18.59■□□□□ 0.57
UBE2D4-209ENST00000454428 OSCP1Q8WVF1 389 aa18.59■□□□□ 0.57
UBE2D4-209ENST00000454428 SLC22A12Q96S37 553 aa18.59■□□□□ 0.57
UBE2D4-209ENST00000454428 TIPINQ9BVW5 301 aa18.59■□□□□ 0.57
UBE2D4-209ENST00000454428 FOXP1Q9H334 677 aaPredicted RBP18.59■□□□□ 0.57
UBE2D4-209ENST00000454428 TMLHEQ9NVH6 421 aa18.59■□□□□ 0.57
UBE2D4-209ENST00000454428 EVLQ9UI08 416 aaPredicted RBP18.59■□□□□ 0.57
UBE2D4-209ENST00000454428 GON4LQ3T8J9 2241 aa18.59■□□□□ 0.57
UBE2D4-209ENST00000454428 K7EQS6 105 aa18.58■□□□□ 0.56
UBE2D4-209ENST00000454428 XPOTO43592 962 aaKnown RBP18.58■□□□□ 0.56
UBE2D4-209ENST00000454428 CHRM1P11229 460 aaPredicted RBP18.58■□□□□ 0.56
UBE2D4-209ENST00000454428 HNRNPLP14866 589 aaKnown RBP eCLIP18.58■□□□□ 0.56
UBE2D4-209ENST00000454428 TOB1P50616 345 aaPredicted RBP18.58■□□□□ 0.56
UBE2D4-209ENST00000454428 SAFBQ15424 915 aaKnown RBP eCLIP18.58■□□□□ 0.56
UBE2D4-209ENST00000454428 TAF12Q16514 161 aa18.58■□□□□ 0.56
UBE2D4-209ENST00000454428 USP39Q53GS9 565 aaKnown RBP18.58■□□□□ 0.56
UBE2D4-209ENST00000454428 PIP4P1Q86T03 277 aa18.58■□□□□ 0.56
UBE2D4-209ENST00000454428 C11orf74Q86VG3 221 aa18.58■□□□□ 0.56
UBE2D4-209ENST00000454428 MDGA1Q8NFP4 955 aa18.58■□□□□ 0.56
UBE2D4-209ENST00000454428 OLIG1Q8TAK6 271 aa18.58■□□□□ 0.56
UBE2D4-209ENST00000454428 KCNN1Q92952 543 aa18.58■□□□□ 0.56
UBE2D4-209ENST00000454428 CNOT6LQ96LI5 555 aaKnown RBP18.58■□□□□ 0.56
UBE2D4-209ENST00000454428 TSPAN18Q96SJ8 248 aa18.58■□□□□ 0.56
UBE2D4-209ENST00000454428 TMEM74BQ9NUR3 256 aa18.58■□□□□ 0.56
UBE2D4-209ENST00000454428 DUS2Q9NX74 493 aaKnown RBP18.58■□□□□ 0.56
UBE2D4-209ENST00000454428 ABI2Q9NYB9 513 aaPredicted RBP18.58■□□□□ 0.56
UBE2D4-209ENST00000454428 WNT6Q9Y6F9 365 aa18.58■□□□□ 0.56
UBE2D4-209ENST00000454428 NPHP3-ACAD11A0A0J9YXS1 232 aa18.57■□□□□ 0.56
UBE2D4-209ENST00000454428 SPAARA0A1B0GVQ0 90 aa18.57■□□□□ 0.56
UBE2D4-209ENST00000454428 OGTO15294 1046 aa18.57■□□□□ 0.56
UBE2D4-209ENST00000454428 SMTNP53814 917 aa18.57■□□□□ 0.56
UBE2D4-209ENST00000454428 NCKAP1LP55160 1127 aa18.57■□□□□ 0.56
UBE2D4-209ENST00000454428 USP4Q13107 963 aa18.57■□□□□ 0.56
UBE2D4-209ENST00000454428 PSMD2Q13200 908 aa18.57■□□□□ 0.56
UBE2D4-209ENST00000454428 GAB4Q2WGN9 574 aa18.57■□□□□ 0.56
UBE2D4-209ENST00000454428 SDHAF4Q5VUM1 108 aa18.57■□□□□ 0.56
UBE2D4-209ENST00000454428 WSCD1Q658N2 575 aa18.57■□□□□ 0.56
UBE2D4-209ENST00000454428 ANO7Q6IWH7 933 aa18.57■□□□□ 0.56
UBE2D4-209ENST00000454428 SLC39A4Q6P5W5 647 aa18.57■□□□□ 0.56
UBE2D4-209ENST00000454428 PIGKQ92643 395 aa18.57■□□□□ 0.56
UBE2D4-209ENST00000454428 CYP2S1Q96SQ9 504 aa18.57■□□□□ 0.56
UBE2D4-209ENST00000454428 RPF1Q9H9Y2 349 aaKnown RBP18.57■□□□□ 0.56
UBE2D4-209ENST00000454428 CPSF3Q9UKF6 684 aaKnown RBP18.57■□□□□ 0.56
UBE2D4-209ENST00000454428 STK24Q9Y6E0 443 aa18.57■□□□□ 0.56
UBE2D4-209ENST00000454428 ADAMTS9Q9P2N4 1935 aa18.57■□□□□ 0.56
UBE2D4-209ENST00000454428 PLXND1Q9Y4D7 1925 aa18.57■□□□□ 0.56
UBE2D4-209ENST00000454428 CYB561D2O14569 222 aa18.56■□□□□ 0.56
UBE2D4-209ENST00000454428 PAX3P23760 479 aa18.56■□□□□ 0.56
UBE2D4-209ENST00000454428 OPRD1P41143 372 aa18.56■□□□□ 0.56
UBE2D4-209ENST00000454428 TRAPPC10P48553 1259 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms