RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 ZSWIM1Q9BR11 485 aa5.25□□□□□ -1.57
HMGB1P16-201ENST00000447155 STK31Q9BXU1 1019 aa5.25□□□□□ -1.57
HMGB1P16-201ENST00000447155 WDR12Q9GZL7 423 aaKnown RBP5.25□□□□□ -1.57
HMGB1P16-201ENST00000447155 TRPM5Q9NZQ8 1165 aa5.25□□□□□ -1.57
HMGB1P16-201ENST00000447155 ITGB1BP2Q9UKP3 347 aa5.25□□□□□ -1.57
HMGB1P16-201ENST00000447155 SORCS3Q9UPU3 1222 aa5.25□□□□□ -1.57
HMGB1P16-201ENST00000447155 FPGT-TNNI3KV9GXZ4 949 aa5.25□□□□□ -1.57
HMGB1P16-201ENST00000447155 AATKQ6ZMQ8 1374 aa5.25□□□□□ -1.57
HMGB1P16-201ENST00000447155 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.25□□□□□ -1.57
HMGB1P16-201ENST00000447155 ARHGAP35Q9NRY4 1499 aa5.25□□□□□ -1.57
HMGB1P16-201ENST00000447155 CCDC144AA2RUR9 1427 aa5.24□□□□□ -1.57
HMGB1P16-201ENST00000447155 UACAQ9BZF9 1416 aa5.24□□□□□ -1.57
HMGB1P16-201ENST00000447155 KIF14Q15058 1648 aa5.24□□□□□ -1.57
HMGB1P16-201ENST00000447155 GAGE12BA1L429 117 aa5.24□□□□□ -1.57
HMGB1P16-201ENST00000447155 CCDC78A2IDD5 438 aa5.24□□□□□ -1.57
HMGB1P16-201ENST00000447155 GAGE12HA6NDE8 117 aa5.24□□□□□ -1.57
HMGB1P16-201ENST00000447155 CLCA1A8K7I4 914 aa5.24□□□□□ -1.57
HMGB1P16-201ENST00000447155 AHRRA9YTQ3 701 aa5.24□□□□□ -1.57
HMGB1P16-201ENST00000447155 E7ENX8 843 aa5.24□□□□□ -1.57
HMGB1P16-201ENST00000447155 AREL1O15033 823 aa5.24□□□□□ -1.57
HMGB1P16-201ENST00000447155 TCEA3O75764 348 aa5.24□□□□□ -1.57
HMGB1P16-201ENST00000447155 RASSF9O75901 435 aa5.24□□□□□ -1.57
HMGB1P16-201ENST00000447155 GPANK1O95872 356 aa5.24□□□□□ -1.57
HMGB1P16-201ENST00000447155 ATXN1LP0C7T5 689 aaKnown RBP5.24□□□□□ -1.57
HMGB1P16-201ENST00000447155 HARSP12081 509 aaKnown RBP5.24□□□□□ -1.57
HMGB1P16-201ENST00000447155 KCNA2P16389 499 aa5.24□□□□□ -1.57
HMGB1P16-201ENST00000447155 IL6STP40189 918 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P16-201ENST00000447155 TOB1P50616 345 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P16-201ENST00000447155 MAPK10P53779 464 aa5.24□□□□□ -1.57
HMGB1P16-201ENST00000447155 TNFAIP2Q03169 654 aa5.24□□□□□ -1.57
HMGB1P16-201ENST00000447155 TAP2Q03519 686 aa5.24□□□□□ -1.57
HMGB1P16-201ENST00000447155 PLP2Q04941 152 aa5.24□□□□□ -1.57
HMGB1P16-201ENST00000447155 CALD1Q05682 793 aaKnown RBP5.24□□□□□ -1.57
HMGB1P16-201ENST00000447155 TOB2Q14106 344 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P16-201ENST00000447155 SLC35G1Q2M3R5 365 aa5.24□□□□□ -1.57
HMGB1P16-201ENST00000447155 RABL3Q5HYI8 236 aa5.24□□□□□ -1.57
HMGB1P16-201ENST00000447155 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P16-201ENST00000447155 CATSPERGQ6ZRH7 1159 aa5.24□□□□□ -1.57
HMGB1P16-201ENST00000447155 LRRC55Q6ZSA7 311 aa5.24□□□□□ -1.57
HMGB1P16-201ENST00000447155 CLNKQ7Z7G1 428 aa5.24□□□□□ -1.57
HMGB1P16-201ENST00000447155 GAS2L3Q86XJ1 694 aa5.24□□□□□ -1.57
HMGB1P16-201ENST00000447155 TMPRSS6Q8IU80 811 aa5.24□□□□□ -1.57
HMGB1P16-201ENST00000447155 MAPKAPK5Q8IW41 473 aa5.24□□□□□ -1.57
HMGB1P16-201ENST00000447155 YAF2Q8IY57 180 aa5.24□□□□□ -1.57
HMGB1P16-201ENST00000447155 FANCBQ8NB91 859 aa5.24□□□□□ -1.57
HMGB1P16-201ENST00000447155 PSD4Q8NDX1 1056 aa5.24□□□□□ -1.57
HMGB1P16-201ENST00000447155 CPT1CQ8TCG5 803 aa5.24□□□□□ -1.57
HMGB1P16-201ENST00000447155 POF1BQ8WVV4 589 aa5.24□□□□□ -1.57
HMGB1P16-201ENST00000447155 TMEM41AQ96HV5 264 aa5.24□□□□□ -1.57
HMGB1P16-201ENST00000447155 SLC46A1Q96NT5 459 aa5.24□□□□□ -1.57
HMGB1P16-201ENST00000447155 MESP1Q9BRJ9 268 aa5.24□□□□□ -1.57
HMGB1P16-201ENST00000447155 SLC46A2Q9BY10 475 aa5.24□□□□□ -1.57
HMGB1P16-201ENST00000447155 EIF2AQ9BY44 585 aaKnown RBP5.24□□□□□ -1.57
HMGB1P16-201ENST00000447155 TTYH3Q9C0H2 523 aa5.24□□□□□ -1.57
HMGB1P16-201ENST00000447155 PTPRHQ9HD43 1115 aa5.24□□□□□ -1.57
HMGB1P16-201ENST00000447155 XPNPEP3Q9NQH7 507 aa5.24□□□□□ -1.57
HMGB1P16-201ENST00000447155 ZSCAN32Q9NX65 697 aa5.24□□□□□ -1.57
HMGB1P16-201ENST00000447155 VSX1Q9NZR4 365 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P16-201ENST00000447155 CTTNBP2NLQ9P2B4 639 aa5.24□□□□□ -1.57
HMGB1P16-201ENST00000447155 ZNF212Q9UDV6 495 aa5.24□□□□□ -1.57
HMGB1P16-201ENST00000447155 ST6GALNAC2Q9UJ37 374 aa5.24□□□□□ -1.57
HMGB1P16-201ENST00000447155 KCNE5Q9UJ90 142 aa5.24□□□□□ -1.57
HMGB1P16-201ENST00000447155 CEP83Q9Y592 693 aa5.24□□□□□ -1.57
HMGB1P16-201ENST00000447155 PCDHGB2Q9Y5G2 931 aa5.24□□□□□ -1.57
HMGB1P16-201ENST00000447155 RAD54BQ9Y620 910 aa5.24□□□□□ -1.57
HMGB1P16-201ENST00000447155 PCF11O94913 1555 aaKnown RBP5.24□□□□□ -1.57
HMGB1P16-201ENST00000447155 EFCAB5A4FU69 1503 aa5.23□□□□□ -1.57
HMGB1P16-201ENST00000447155 ZMYM4Q5VZL5 1548 aa5.23□□□□□ -1.57
HMGB1P16-201ENST00000447155 RNASET2O00584 256 aaKnown RBP5.23□□□□□ -1.57
HMGB1P16-201ENST00000447155 DCLK1O15075 740 aa5.23□□□□□ -1.57
HMGB1P16-201ENST00000447155 MUSKO15146 869 aa5.23□□□□□ -1.57
HMGB1P16-201ENST00000447155 ERN1O75460 977 aaKnown RBP5.23□□□□□ -1.57
HMGB1P16-201ENST00000447155 INMTO95050 263 aa5.23□□□□□ -1.57
HMGB1P16-201ENST00000447155 EEF1GP26641 437 aaKnown RBP5.23□□□□□ -1.57
HMGB1P16-201ENST00000447155 TECP42680 631 aa5.23□□□□□ -1.57
HMGB1P16-201ENST00000447155 GCLCP48506 637 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P16-201ENST00000447155 HSPA7P48741 367 aa5.23□□□□□ -1.57
HMGB1P16-201ENST00000447155 ANXA11P50995 505 aaKnown RBP5.23□□□□□ -1.57
HMGB1P16-201ENST00000447155 LOXL3P58215 753 aa5.23□□□□□ -1.57
HMGB1P16-201ENST00000447155 SATB1Q01826 763 aa5.23□□□□□ -1.57
HMGB1P16-201ENST00000447155 BOP1Q14137 746 aaKnown RBP5.23□□□□□ -1.57
HMGB1P16-201ENST00000447155 ERAP2Q6P179 960 aa5.23□□□□□ -1.57
HMGB1P16-201ENST00000447155 TAF2Q6P1X5 1199 aa5.23□□□□□ -1.57
HMGB1P16-201ENST00000447155 ZNF585AQ6P3V2 769 aa5.23□□□□□ -1.57
HMGB1P16-201ENST00000447155 LAYNQ6UX15 382 aa5.23□□□□□ -1.57
HMGB1P16-201ENST00000447155 TSHZ1Q6ZSZ6 1077 aa5.23□□□□□ -1.57
HMGB1P16-201ENST00000447155 MTERF4Q7Z6M4 381 aaKnown RBP5.23□□□□□ -1.57
HMGB1P16-201ENST00000447155 TXLNBQ8N3L3 684 aa5.23□□□□□ -1.57
HMGB1P16-201ENST00000447155 Q8NA96 180 aa5.23□□□□□ -1.57
HMGB1P16-201ENST00000447155 NSUN7Q8NE18 718 aaKnown RBP5.23□□□□□ -1.57
HMGB1P16-201ENST00000447155 ZNF483Q8TF39 744 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P16-201ENST00000447155 RAPGEF4Q8WZA2 1011 aa5.23□□□□□ -1.57
HMGB1P16-201ENST00000447155 LRIG1Q96JA1 1093 aa5.23□□□□□ -1.57
HMGB1P16-201ENST00000447155 C20orf173Q96LM9 149 aa5.23□□□□□ -1.57
HMGB1P16-201ENST00000447155 PPP1R9BQ96SB3 815 aa5.23□□□□□ -1.57
HMGB1P16-201ENST00000447155 CRB3Q9BUF7 120 aa5.23□□□□□ -1.57
HMGB1P16-201ENST00000447155 TEX101Q9BY14 249 aa5.23□□□□□ -1.57
HMGB1P16-201ENST00000447155 KLC2Q9H0B6 622 aa5.23□□□□□ -1.57
HMGB1P16-201ENST00000447155 DHX36Q9H2U1 1008 aaKnown RBP5.23□□□□□ -1.57
HMGB1P16-201ENST00000447155 CDC23Q9UJX2 597 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 274.1 ms