RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-208ENST00000436638 GPNMBQ14956 572 aa6.67□□□□□ -1.34
ECHDC1-208ENST00000436638 KYAT1Q16773 422 aa6.67□□□□□ -1.34
ECHDC1-208ENST00000436638 KNOP1Q1ED39 458 aaKnown RBP6.67□□□□□ -1.34
ECHDC1-208ENST00000436638 TMEM240Q5SV17 173 aa6.67□□□□□ -1.34
ECHDC1-208ENST00000436638 NT5DC1Q5TFE4 455 aa6.67□□□□□ -1.34
ECHDC1-208ENST00000436638 ARMCX5Q6P1M9 558 aa6.67□□□□□ -1.34
ECHDC1-208ENST00000436638 SLC27A1Q6PCB7 646 aa6.67□□□□□ -1.34
ECHDC1-208ENST00000436638 MPZL3Q6UWV2 235 aa6.67□□□□□ -1.34
ECHDC1-208ENST00000436638 SLC24A5Q71RS6 500 aa6.67□□□□□ -1.34
ECHDC1-208ENST00000436638 TAX1BP1Q86VP1 789 aa6.67□□□□□ -1.34
ECHDC1-208ENST00000436638 ABI1Q8IZP0 508 aa6.67□□□□□ -1.34
ECHDC1-208ENST00000436638 TMEM102Q8N9M5 508 aaPredicted RBP6.67□□□□□ -1.34
ECHDC1-208ENST00000436638 GOLGA5Q8TBA6 731 aa6.67□□□□□ -1.34
ECHDC1-208ENST00000436638 ZNF507Q8TCN5 953 aa6.67□□□□□ -1.34
ECHDC1-208ENST00000436638 NOC3LQ8WTT2 800 aaKnown RBP6.67□□□□□ -1.34
ECHDC1-208ENST00000436638 WFDC12Q8WWY7 111 aa6.67□□□□□ -1.34
ECHDC1-208ENST00000436638 POMGNT1Q8WZA1 660 aa6.67□□□□□ -1.34
ECHDC1-208ENST00000436638 HERVK_113Q902F9 699 aa6.67□□□□□ -1.34
ECHDC1-208ENST00000436638 KCNN1Q92952 543 aa6.67□□□□□ -1.34
ECHDC1-208ENST00000436638 NXPE3Q969Y0 559 aa6.67□□□□□ -1.34
ECHDC1-208ENST00000436638 CENPTQ96BT3 561 aa6.67□□□□□ -1.34
ECHDC1-208ENST00000436638 ERP27Q96DN0 273 aa6.67□□□□□ -1.34
ECHDC1-208ENST00000436638 FIZ1Q96SL8 496 aa6.67□□□□□ -1.34
ECHDC1-208ENST00000436638 SLC9A7Q96T83 725 aa6.67□□□□□ -1.34
ECHDC1-208ENST00000436638 ACO2Q99798 780 aaKnown RBP6.67□□□□□ -1.34
ECHDC1-208ENST00000436638 TSG101Q99816 390 aa6.67□□□□□ -1.34
ECHDC1-208ENST00000436638 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.67□□□□□ -1.347e-6■■■■□ 21.2
ECHDC1-208ENST00000436638 APOL6Q9BWW8 343 aa6.67□□□□□ -1.34
ECHDC1-208ENST00000436638 OSBPL7Q9BZF2 842 aa6.67□□□□□ -1.34
ECHDC1-208ENST00000436638 NIF3L1Q9GZT8 377 aa6.67□□□□□ -1.34
ECHDC1-208ENST00000436638 ADAM19Q9H013 955 aa6.67□□□□□ -1.34
ECHDC1-208ENST00000436638 CCDC113Q9H0I3 377 aa6.67□□□□□ -1.34
ECHDC1-208ENST00000436638 GBP3Q9H0R5 595 aa6.67□□□□□ -1.34
ECHDC1-208ENST00000436638 RMI1Q9H9A7 625 aa6.67□□□□□ -1.34
ECHDC1-208ENST00000436638 TPSG1Q9NRR2 321 aa6.67□□□□□ -1.34
ECHDC1-208ENST00000436638 RGS18Q9NS28 235 aa6.67□□□□□ -1.34
ECHDC1-208ENST00000436638 FAM105AQ9NUU6 356 aa6.67□□□□□ -1.34
ECHDC1-208ENST00000436638 ANKFY1Q9P2R3 1169 aa6.67□□□□□ -1.34
ECHDC1-208ENST00000436638 PARP2Q9UGN5 583 aa6.67□□□□□ -1.34
ECHDC1-208ENST00000436638 RABL2BQ9UNT1 228 aa6.67□□□□□ -1.34
ECHDC1-208ENST00000436638 MAPK8IP1Q9UQF2 711 aa6.67□□□□□ -1.34
ECHDC1-208ENST00000436638 GDAQ9Y2T3 454 aa6.67□□□□□ -1.34
ECHDC1-208ENST00000436638 SLC4A7Q9Y6M7 1214 aa6.67□□□□□ -1.34
ECHDC1-208ENST00000436638 ALPK3Q96L96 1907 aa6.67□□□□□ -1.34
ECHDC1-208ENST00000436638 TANC1Q9C0D5 1861 aa6.66□□□□□ -1.34
ECHDC1-208ENST00000436638 MYH11P35749 1972 aa6.66□□□□□ -1.34
ECHDC1-208ENST00000436638 A0A0U1RQF3 1178 aa6.66□□□□□ -1.34
ECHDC1-208ENST00000436638 A0A1B0GUA9 196 aa6.66□□□□□ -1.34
ECHDC1-208ENST00000436638 FSCN2O14926 492 aa6.66□□□□□ -1.34
ECHDC1-208ENST00000436638 KIAA0391O15091 583 aaKnown RBP6.66□□□□□ -1.34
ECHDC1-208ENST00000436638 MGEA5O60502 916 aa6.66□□□□□ -1.34
ECHDC1-208ENST00000436638 RNASEH2AO75792 299 aaKnown RBP6.66□□□□□ -1.34
ECHDC1-208ENST00000436638 EOMESO95936 686 aa6.66□□□□□ -1.34
ECHDC1-208ENST00000436638 PIGRP01833 764 aa6.66□□□□□ -1.34
ECHDC1-208ENST00000436638 MCF2P10911 925 aa6.66□□□□□ -1.34
ECHDC1-208ENST00000436638 RPL13P26373 211 aaKnown RBP6.66□□□□□ -1.34
ECHDC1-208ENST00000436638 BMP8BP34820 402 aa6.66□□□□□ -1.34
ECHDC1-208ENST00000436638 CASP5P51878 434 aa6.66□□□□□ -1.34
ECHDC1-208ENST00000436638 EPHB4P54760 987 aa6.66□□□□□ -1.34
ECHDC1-208ENST00000436638 NLRP12P59046 1061 aa6.66□□□□□ -1.34
ECHDC1-208ENST00000436638 WDR5P61964 334 aaKnown RBP6.66□□□□□ -1.34
ECHDC1-208ENST00000436638 MORC3Q14149 939 aa6.66□□□□□ -1.34
ECHDC1-208ENST00000436638 DSC3Q14574 896 aa6.66□□□□□ -1.34
ECHDC1-208ENST00000436638 NOLC1Q14978 699 aaKnown RBP eCLIP6.66□□□□□ -1.34
ECHDC1-208ENST00000436638 SHHQ15465 462 aa6.66□□□□□ -1.34
ECHDC1-208ENST00000436638 TAF11Q15544 211 aa6.66□□□□□ -1.34
ECHDC1-208ENST00000436638 TPD52L1Q16890 204 aaPredicted RBP6.66□□□□□ -1.34
ECHDC1-208ENST00000436638 EEF1DP3Q658K8 133 aa6.66□□□□□ -1.34
ECHDC1-208ENST00000436638 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.66□□□□□ -1.34
ECHDC1-208ENST00000436638 EPM2AIP1Q7L775 607 aaPredicted RBP6.66□□□□□ -1.34
ECHDC1-208ENST00000436638 JAZF1Q86VZ6 243 aa6.66□□□□□ -1.34
ECHDC1-208ENST00000436638 CDR2LQ86X02 465 aaPredicted RBP6.66□□□□□ -1.34
ECHDC1-208ENST00000436638 ECHDC2Q86YB7 292 aa6.66□□□□□ -1.34
ECHDC1-208ENST00000436638 THNSL1Q8IYQ7 743 aa6.66□□□□□ -1.34
ECHDC1-208ENST00000436638 GUF1Q8N442 669 aaKnown RBP6.66□□□□□ -1.34
ECHDC1-208ENST00000436638 TEX19Q8NA77 164 aa6.66□□□□□ -1.34
ECHDC1-208ENST00000436638 MLKLQ8NB16 471 aa6.66□□□□□ -1.34
ECHDC1-208ENST00000436638 KIAA0895Q8NCT3 520 aa6.66□□□□□ -1.34
ECHDC1-208ENST00000436638 GALNT11Q8NCW6 608 aa6.66□□□□□ -1.34
ECHDC1-208ENST00000436638 SPATA20Q8TB22 786 aa6.66□□□□□ -1.34
ECHDC1-208ENST00000436638 PHOSPHO2Q8TCD6 241 aa6.66□□□□□ -1.34
ECHDC1-208ENST00000436638 URGCPQ8TCY9 931 aa6.66□□□□□ -1.34
ECHDC1-208ENST00000436638 SCFD1Q8WVM8 642 aa6.66□□□□□ -1.34
ECHDC1-208ENST00000436638 C17orf50Q8WW18 174 aa6.66□□□□□ -1.34
ECHDC1-208ENST00000436638 FAM129BQ96TA1 746 aa6.66□□□□□ -1.34
ECHDC1-208ENST00000436638 GDF15Q99988 308 aa6.66□□□□□ -1.34
ECHDC1-208ENST00000436638 MSTO1Q9BUK6 570 aa6.66□□□□□ -1.34
ECHDC1-208ENST00000436638 FGFBP2Q9BYJ0 223 aa6.66□□□□□ -1.34
ECHDC1-208ENST00000436638 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.66□□□□□ -1.34
ECHDC1-208ENST00000436638 MRPL18Q9H0U6 180 aaKnown RBP6.66□□□□□ -1.34
ECHDC1-208ENST00000436638 CDT1Q9H211 546 aa6.66□□□□□ -1.34
ECHDC1-208ENST00000436638 TMX1Q9H3N1 280 aa6.66□□□□□ -1.34
ECHDC1-208ENST00000436638 TSPY26PQ9H489 355 aa6.66□□□□□ -1.34
ECHDC1-208ENST00000436638 PDZD7Q9H5P4 517 aa6.66□□□□□ -1.34
ECHDC1-208ENST00000436638 ELAC1Q9H777 363 aaKnown RBP6.66□□□□□ -1.34
ECHDC1-208ENST00000436638 UBN1Q9NPG3 1134 aa6.66□□□□□ -1.34
ECHDC1-208ENST00000436638 MED4Q9NPJ6 270 aa6.66□□□□□ -1.34
ECHDC1-208ENST00000436638 TOPORSQ9NS56 1045 aaPredicted RBP6.66□□□□□ -1.34
ECHDC1-208ENST00000436638 TYW1Q9NV66 732 aaKnown RBP6.66□□□□□ -1.34
ECHDC1-208ENST00000436638 ANO10Q9NW15 660 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms