RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 NCOA3Q9Y6Q9 1424 aa6.3□□□□□ -1.4
HMGB3P5-201ENST00000428894 TIAM1Q13009 1591 aa6.3□□□□□ -1.4
HMGB3P5-201ENST00000428894 EIF2AK4Q9P2K8 1649 aaKnown RBP6.29□□□□□ -1.4
HMGB3P5-201ENST00000428894 LRRC14BA6NHZ5 514 aa6.29□□□□□ -1.4
HMGB3P5-201ENST00000428894 NT5C1B-RDH14C9J2C7 533 aa6.29□□□□□ -1.4
HMGB3P5-201ENST00000428894 E9PLN8 166 aa6.29□□□□□ -1.4
HMGB3P5-201ENST00000428894 MPPED1O15442 326 aa6.29□□□□□ -1.4
HMGB3P5-201ENST00000428894 PROM1O43490 865 aa6.29□□□□□ -1.4
HMGB3P5-201ENST00000428894 C1RP00736 705 aa6.29□□□□□ -1.4
HMGB3P5-201ENST00000428894 ATF3P18847 181 aa6.29□□□□□ -1.4
HMGB3P5-201ENST00000428894 CYP2C19P33261 490 aa6.29□□□□□ -1.4
HMGB3P5-201ENST00000428894 RECQLP46063 649 aaPredicted RBP6.29□□□□□ -1.4
HMGB3P5-201ENST00000428894 POU6F2P78424 691 aaPredicted RBP6.29□□□□□ -1.4
HMGB3P5-201ENST00000428894 ARHGEF5Q12774 1597 aa6.29□□□□□ -1.4
HMGB3P5-201ENST00000428894 TAPT1Q6NXT6 567 aa6.29□□□□□ -1.4
HMGB3P5-201ENST00000428894 MICALCLQ6ZW33 695 aa6.29□□□□□ -1.4
HMGB3P5-201ENST00000428894 PDSS2Q86YH6 399 aa6.29□□□□□ -1.4
HMGB3P5-201ENST00000428894 C3orf20Q8ND61 904 aa6.29□□□□□ -1.4
HMGB3P5-201ENST00000428894 ZNF384Q8TF68 577 aa6.29□□□□□ -1.4
HMGB3P5-201ENST00000428894 TFAP2BQ92481 460 aa6.29□□□□□ -1.4
HMGB3P5-201ENST00000428894 TRIB1Q96RU8 372 aa6.29□□□□□ -1.4
HMGB3P5-201ENST00000428894 SMOQ99835 787 aa6.29□□□□□ -1.4
HMGB3P5-201ENST00000428894 VKORC1Q9BQB6 163 aa6.29□□□□□ -1.4
HMGB3P5-201ENST00000428894 KLK15Q9H2R5 256 aa6.29□□□□□ -1.4
HMGB3P5-201ENST00000428894 BRD9Q9H8M2 597 aa6.29□□□□□ -1.4
HMGB3P5-201ENST00000428894 IL17RBQ9NRM6 502 aa6.29□□□□□ -1.4
HMGB3P5-201ENST00000428894 SIDT1Q9NXL6 827 aaKnown RBP6.29□□□□□ -1.4
HMGB3P5-201ENST00000428894 KDM5AP29375 1690 aaKnown RBP6.29□□□□□ -1.4
HMGB3P5-201ENST00000428894 MAP3K1Q13233 1512 aa6.29□□□□□ -1.4
HMGB3P5-201ENST00000428894 EHBP1L1Q8N3D4 1523 aa6.29□□□□□ -1.4
HMGB3P5-201ENST00000428894 E7ENX8 843 aa6.28□□□□□ -1.4
HMGB3P5-201ENST00000428894 POLRMTO00411 1230 aaKnown RBP6.28□□□□□ -1.4
HMGB3P5-201ENST00000428894 ORC4O43929 436 aa6.28□□□□□ -1.4
HMGB3P5-201ENST00000428894 SNUPNO95149 360 aaKnown RBP6.28□□□□□ -1.4
HMGB3P5-201ENST00000428894 MATN4O95460 622 aa6.28□□□□□ -1.4
HMGB3P5-201ENST00000428894 GNAI3P08754 354 aa6.28□□□□□ -1.4
HMGB3P5-201ENST00000428894 PSMC1P62191 440 aaKnown RBP6.28□□□□□ -1.4
HMGB3P5-201ENST00000428894 GNAI1P63096 354 aa6.28□□□□□ -1.4
HMGB3P5-201ENST00000428894 TAP2Q03519 686 aa6.28□□□□□ -1.4
HMGB3P5-201ENST00000428894 IDI1Q13907 227 aa6.28□□□□□ -1.4
HMGB3P5-201ENST00000428894 HLXQ14774 488 aaPredicted RBP6.28□□□□□ -1.4
HMGB3P5-201ENST00000428894 AKNAD1Q5T1N1 836 aa6.28□□□□□ -1.4
HMGB3P5-201ENST00000428894 SLC30A10Q6XR72 485 aa6.28□□□□□ -1.4
HMGB3P5-201ENST00000428894 SCAMP4Q969E2 229 aa6.28□□□□□ -1.4
HMGB3P5-201ENST00000428894 PGBD1Q96JS3 809 aa6.28□□□□□ -1.4
HMGB3P5-201ENST00000428894 SLAMF7Q9NQ25 335 aa6.28□□□□□ -1.4
HMGB3P5-201ENST00000428894 GNL3LQ9NVN8 582 aaKnown RBP6.28□□□□□ -1.4
HMGB3P5-201ENST00000428894 SLC52A1Q9NWF4 448 aa6.28□□□□□ -1.4
HMGB3P5-201ENST00000428894 ASB6Q9NWX5 421 aa6.28□□□□□ -1.4
HMGB3P5-201ENST00000428894 POLHQ9Y253 713 aa6.28□□□□□ -1.4
HMGB3P5-201ENST00000428894 PCDHA3Q9Y5H8 950 aa6.28□□□□□ -1.4
HMGB3P5-201ENST00000428894 TET3O43151 1660 aa6.28□□□□□ -1.4
HMGB3P5-201ENST00000428894 COL16A1Q07092 1604 aaPredicted RBP6.28□□□□□ -1.4
HMGB3P5-201ENST00000428894 CAMSAP2Q08AD1 1489 aa6.28□□□□□ -1.4
HMGB3P5-201ENST00000428894 CEP152O94986 1710 aa6.28□□□□□ -1.4
HMGB3P5-201ENST00000428894 SHPRHQ149N8 1683 aa6.27□□□□□ -1.41
HMGB3P5-201ENST00000428894 EFCAB6Q5THR3 1501 aa6.27□□□□□ -1.41
HMGB3P5-201ENST00000428894 CCDC151A5D8V7 595 aa6.27□□□□□ -1.41
HMGB3P5-201ENST00000428894 ZNF785A8K8V0 405 aa6.27□□□□□ -1.41
HMGB3P5-201ENST00000428894 GJB1P08034 283 aa6.27□□□□□ -1.41
HMGB3P5-201ENST00000428894 CHRM2P08172 466 aa6.27□□□□□ -1.41
HMGB3P5-201ENST00000428894 PPP3CBP16298 524 aa6.27□□□□□ -1.41
HMGB3P5-201ENST00000428894 PDCP20941 246 aa6.27□□□□□ -1.41
HMGB3P5-201ENST00000428894 IL12RB1P42701 662 aa6.27□□□□□ -1.41
HMGB3P5-201ENST00000428894 MAPK10P53779 464 aa6.27□□□□□ -1.41
HMGB3P5-201ENST00000428894 PTPRRQ15256 657 aa6.27□□□□□ -1.41
HMGB3P5-201ENST00000428894 NBPF8Q3BBV2 869 aa6.27□□□□□ -1.41
HMGB3P5-201ENST00000428894 COLEC12Q5KU26 742 aa6.27□□□□□ -1.41
HMGB3P5-201ENST00000428894 TMPRSS9Q7Z410 1059 aa6.27□□□□□ -1.41
HMGB3P5-201ENST00000428894 PEG10Q86TG7 708 aaKnown RBP6.27□□□□□ -1.41
HMGB3P5-201ENST00000428894 MYCBPAPQ8TBZ2 947 aa6.27□□□□□ -1.41
HMGB3P5-201ENST00000428894 LRRC59Q96AG4 307 aaKnown RBP6.27□□□□□ -1.41
HMGB3P5-201ENST00000428894 HOMER2Q9NSB8 354 aa6.27□□□□□ -1.41
HMGB3P5-201ENST00000428894 CFAP97Q9P2B7 532 aa6.27□□□□□ -1.41
HMGB3P5-201ENST00000428894 KANK1Q14678 1352 aa6.27□□□□□ -1.41
HMGB3P5-201ENST00000428894 CHD2O14647 1828 aaKnown RBP6.27□□□□□ -1.41
HMGB3P5-201ENST00000428894 AFF2P51816 1311 aa6.26□□□□□ -1.41
HMGB3P5-201ENST00000428894 PIK3C2BO00750 1634 aa6.26□□□□□ -1.41
HMGB3P5-201ENST00000428894 LRP6O75581 1613 aa6.26□□□□□ -1.41
HMGB3P5-201ENST00000428894 LRRC3CA6NJW4 275 aa6.26□□□□□ -1.41
HMGB3P5-201ENST00000428894 C1QL1O75973 258 aa6.26□□□□□ -1.41
HMGB3P5-201ENST00000428894 ARIH2O95376 493 aa6.26□□□□□ -1.41
HMGB3P5-201ENST00000428894 LPOP22079 712 aaPredicted RBP6.26□□□□□ -1.41
HMGB3P5-201ENST00000428894 GRIA3P42263 894 aa6.26□□□□□ -1.41
HMGB3P5-201ENST00000428894 NPTX2P47972 431 aa6.26□□□□□ -1.41
HMGB3P5-201ENST00000428894 THEMIS2Q5TEJ8 643 aa6.26□□□□□ -1.41
HMGB3P5-201ENST00000428894 GRASPQ7Z6J2 395 aaPredicted RBP6.26□□□□□ -1.41
HMGB3P5-201ENST00000428894 B3GALNT2Q8NCR0 500 aa6.26□□□□□ -1.41
HMGB3P5-201ENST00000428894 ZCRB1Q8TBF4 217 aaKnown RBP6.26□□□□□ -1.41
HMGB3P5-201ENST00000428894 POC1BQ8TC44 478 aa6.26□□□□□ -1.41
HMGB3P5-201ENST00000428894 C1orf43Q9BWL3 253 aa6.26□□□□□ -1.41
HMGB3P5-201ENST00000428894 RLIMQ9NVW2 624 aa6.26□□□□□ -1.41
HMGB3P5-201ENST00000428894 NWD1Q149M9 1564 aa6.26□□□□□ -1.41
HMGB3P5-201ENST00000428894 MAST1Q9Y2H9 1570 aa6.26□□□□□ -1.41
HMGB3P5-201ENST00000428894 DUOX2Q9NRD8 1548 aa6.25□□□□□ -1.41
HMGB3P5-201ENST00000428894 AHDC1Q5TGY3 1603 aaPredicted RBP6.25□□□□□ -1.41
HMGB3P5-201ENST00000428894 PRSS29PA6NIE9 313 aa6.25□□□□□ -1.41
HMGB3P5-201ENST00000428894 ADM5C9JUS6 153 aa6.25□□□□□ -1.41
HMGB3P5-201ENST00000428894 F5H697 171 aa6.25□□□□□ -1.41
HMGB3P5-201ENST00000428894 PRDX5P30044 214 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms