RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 STKLD1Q8NE28 680 aa9.97□□□□□ -0.81
NUP50-206ENST00000422489 TTC16Q8NEE8 873 aa9.97□□□□□ -0.81
NUP50-206ENST00000422489 CXorf38Q8TB03 319 aa9.97□□□□□ -0.81
NUP50-206ENST00000422489 RSPRY1Q96DX4 576 aa9.97□□□□□ -0.81
NUP50-206ENST00000422489 PAGE5Q96GU1 130 aa9.97□□□□□ -0.81
NUP50-206ENST00000422489 SLC46A2Q9BY10 475 aa9.97□□□□□ -0.81
NUP50-206ENST00000422489 OSBPL6Q9BZF3 934 aa9.97□□□□□ -0.81
NUP50-206ENST00000422489 SMG9Q9H0W8 520 aaKnown RBP9.97□□□□□ -0.81
NUP50-206ENST00000422489 TASP1Q9H6P5 420 aa9.97□□□□□ -0.81
NUP50-206ENST00000422489 LMAN1LQ9HAT1 526 aa9.97□□□□□ -0.81
NUP50-206ENST00000422489 TRPV4Q9HBA0 871 aa9.97□□□□□ -0.81
NUP50-206ENST00000422489 EXOC1Q9NV70 894 aa9.97□□□□□ -0.81
NUP50-206ENST00000422489 PIAS3Q9Y6X2 628 aa9.97□□□□□ -0.81
NUP50-206ENST00000422489 PTPRJQ12913 1337 aa9.97□□□□□ -0.81
NUP50-206ENST00000422489 MUC6Q6W4X9 2439 aa9.97□□□□□ -0.81
NUP50-206ENST00000422489 VWA8A3KMH1 1905 aa9.97□□□□□ -0.81
NUP50-206ENST00000422489 TRIOO75962 3097 aa9.97□□□□□ -0.81
NUP50-206ENST00000422489 MYO10Q9HD67 2058 aa9.96□□□□□ -0.81
NUP50-206ENST00000422489 MYBPHLA2RUH7 354 aa9.96□□□□□ -0.82
NUP50-206ENST00000422489 PRR23AA6NEV1 266 aa9.96□□□□□ -0.82
NUP50-206ENST00000422489 CSH1P0DML2 217 aa9.96□□□□□ -0.82
NUP50-206ENST00000422489 CSH2P0DML3 217 aa9.96□□□□□ -0.82
NUP50-206ENST00000422489 PFKFB1P16118 471 aa9.96□□□□□ -0.82
NUP50-206ENST00000422489 CMA1P23946 247 aa9.96□□□□□ -0.82
NUP50-206ENST00000422489 CCNE1P24864 410 aa9.96□□□□□ -0.82
NUP50-206ENST00000422489 LMO2P25791 158 aa9.96□□□□□ -0.82
NUP50-206ENST00000422489 PCSK1P29120 753 aa9.96□□□□□ -0.82
NUP50-206ENST00000422489 SNRPFP62306 86 aaKnown RBP9.96□□□□□ -0.82
NUP50-206ENST00000422489 KRT85P78386 507 aa9.96□□□□□ -0.82
NUP50-206ENST00000422489 CYP24A1Q07973 514 aa9.96□□□□□ -0.82
NUP50-206ENST00000422489 PSMD6Q15008 389 aa9.96□□□□□ -0.82
NUP50-206ENST00000422489 KNOP1Q1ED39 458 aaKnown RBP9.96□□□□□ -0.82
NUP50-206ENST00000422489 KMT5BQ4FZB7 885 aa9.96□□□□□ -0.82
NUP50-206ENST00000422489 DPH6Q7L8W6 267 aa9.96□□□□□ -0.82
NUP50-206ENST00000422489 WDR49Q8IV35 697 aa9.96□□□□□ -0.82
NUP50-206ENST00000422489 ADSSL1Q8N142 457 aa9.96□□□□□ -0.82
NUP50-206ENST00000422489 TOP6BLQ8N6T0 577 aa9.96□□□□□ -0.82
NUP50-206ENST00000422489 MAB21L3Q8N8X9 362 aa9.96□□□□□ -0.82
NUP50-206ENST00000422489 LEO1Q8WVC0 666 aaPredicted RBP9.96□□□□□ -0.82
NUP50-206ENST00000422489 ZFYVE19Q96K21 471 aa9.96□□□□□ -0.82
NUP50-206ENST00000422489 SNX25Q9H3E2 840 aa9.96□□□□□ -0.82
NUP50-206ENST00000422489 IL21Q9HBE4 155 aa9.96□□□□□ -0.82
NUP50-206ENST00000422489 THG1LQ9NWX6 298 aaKnown RBP9.96□□□□□ -0.82
NUP50-206ENST00000422489 MAGEC2Q9UBF1 373 aaPredicted RBP9.96□□□□□ -0.82
NUP50-206ENST00000422489 ZDHHC9Q9Y397 364 aa9.96□□□□□ -0.82
NUP50-206ENST00000422489 MTCL1Q9Y4B5 1905 aaKnown RBP9.95□□□□□ -0.82
NUP50-206ENST00000422489 SLC38A8A6NNN8 435 aa9.95□□□□□ -0.82
NUP50-206ENST00000422489 CHADO15335 359 aa9.95□□□□□ -0.82
NUP50-206ENST00000422489 ACTN4O43707 911 aaKnown RBP9.95□□□□□ -0.82
NUP50-206ENST00000422489 F11P03951 625 aa9.95□□□□□ -0.82
NUP50-206ENST00000422489 HMGA1P17096 107 aaKnown RBP9.95□□□□□ -0.82
NUP50-206ENST00000422489 GNL1P36915 607 aaPredicted RBP9.95□□□□□ -0.82
NUP50-206ENST00000422489 AVPR1AP37288 418 aa9.95□□□□□ -0.82
NUP50-206ENST00000422489 SOX9P48436 509 aa9.95□□□□□ -0.82
NUP50-206ENST00000422489 PSMC1P62191 440 aaKnown RBP9.95□□□□□ -0.82
NUP50-206ENST00000422489 CYP27A1Q02318 531 aa9.95□□□□□ -0.82
NUP50-206ENST00000422489 STK4Q13043 487 aa9.95□□□□□ -0.82
NUP50-206ENST00000422489 PSMD2Q13200 908 aa9.95□□□□□ -0.82
NUP50-206ENST00000422489 BIRC3Q13489 604 aa9.95□□□□□ -0.82
NUP50-206ENST00000422489 CCDC142Q17RM4 750 aa9.95□□□□□ -0.82
NUP50-206ENST00000422489 WDR72Q3MJ13 1102 aa9.95□□□□□ -0.82
NUP50-206ENST00000422489 ARHGAP29Q52LW3 1261 aa9.95□□□□□ -0.82
NUP50-206ENST00000422489 TXNDC8Q6A555 127 aa9.95□□□□□ -0.82
NUP50-206ENST00000422489 TSSK4Q6SA08 328 aa9.95□□□□□ -0.82
NUP50-206ENST00000422489 OR6B3Q8NGW1 331 aa9.95□□□□□ -0.82
NUP50-206ENST00000422489 BPIFB1Q8TDL5 484 aa9.95□□□□□ -0.82
NUP50-206ENST00000422489 ZNF516Q92618 1163 aa9.95□□□□□ -0.82
NUP50-206ENST00000422489 MRPS31Q92665 395 aaKnown RBP9.95□□□□□ -0.82
NUP50-206ENST00000422489 CCDC47Q96A33 483 aaKnown RBP9.95□□□□□ -0.82
NUP50-206ENST00000422489 LRRC3BQ96PB8 259 aa9.95□□□□□ -0.82
NUP50-206ENST00000422489 CGRRF1Q99675 332 aa9.95□□□□□ -0.82
NUP50-206ENST00000422489 SYT15Q9BQS2 421 aa9.95□□□□□ -0.82
NUP50-206ENST00000422489 MRPL45Q9BRJ2 306 aaKnown RBP9.95□□□□□ -0.82
NUP50-206ENST00000422489 MKNK1Q9BUB5 465 aa9.95□□□□□ -0.82
NUP50-206ENST00000422489 TRPC7Q9HCX4 862 aa9.95□□□□□ -0.82
NUP50-206ENST00000422489 GKN1Q9NS71 199 aa9.95□□□□□ -0.82
NUP50-206ENST00000422489 NXF1Q9UBU9 619 aaKnown RBP9.95□□□□□ -0.82
NUP50-206ENST00000422489 CDH9Q9ULB4 789 aa9.95□□□□□ -0.82
NUP50-206ENST00000422489 UBE4BO95155 1302 aa9.95□□□□□ -0.82
NUP50-206ENST00000422489 KMT2EQ8IZD2 1858 aa9.94□□□□□ -0.82
NUP50-206ENST00000422489 NCANO14594 1321 aa9.94□□□□□ -0.82
NUP50-206ENST00000422489 GABRDO14764 452 aa9.94□□□□□ -0.82
NUP50-206ENST00000422489 KLRC4O43908 158 aa9.94□□□□□ -0.82
NUP50-206ENST00000422489 PRAMEF12O95522 483 aa9.94□□□□□ -0.82
NUP50-206ENST00000422489 LMNAP02545 664 aaKnown RBP9.94□□□□□ -0.82
NUP50-206ENST00000422489 WARSP23381 471 aaKnown RBP9.94□□□□□ -0.82
NUP50-206ENST00000422489 BDNFP23560 247 aa9.94□□□□□ -0.82
NUP50-206ENST00000422489 GRIK1P39086 918 aa9.94□□□□□ -0.82
NUP50-206ENST00000422489 MAGEA9P43362 315 aa9.94□□□□□ -0.82
NUP50-206ENST00000422489 SYKP43405 635 aa9.94□□□□□ -0.82
NUP50-206ENST00000422489 CASP4P49662 377 aa9.94□□□□□ -0.82
NUP50-206ENST00000422489 NDUFA8P51970 172 aa9.94□□□□□ -0.82
NUP50-206ENST00000422489 NLRP12P59046 1061 aa9.94□□□□□ -0.82
NUP50-206ENST00000422489 MYL6P60660 151 aa9.94□□□□□ -0.82
NUP50-206ENST00000422489 TNNC1P63316 161 aa9.94□□□□□ -0.82
NUP50-206ENST00000422489 EHHADHQ08426 723 aa9.94□□□□□ -0.82
NUP50-206ENST00000422489 FZD5Q13467 585 aa9.94□□□□□ -0.82
NUP50-206ENST00000422489 BMT2Q1RMZ1 405 aa9.94□□□□□ -0.82
NUP50-206ENST00000422489 C4orf50Q6ZRC1 276 aa9.94□□□□□ -0.82
NUP50-206ENST00000422489 MAML2Q8IZL2 1156 aaPredicted RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms