RNA–Protein interactions for RNA: ENST00000395978.7

BDNF-203, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,988 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-203ENST00000395978 BRWD3Q6RI45 1802 aa6.88□□□□□ -1.31
BDNF-203ENST00000395978 A0A087WZ62 844 aa6.88□□□□□ -1.31
BDNF-203ENST00000395978 A0A0B4J269 797 aa6.88□□□□□ -1.31
BDNF-203ENST00000395978 SRRM3A6NNA2 597 aaPredicted RBP6.88□□□□□ -1.31
BDNF-203ENST00000395978 MAFO75444 373 aaPredicted RBP6.88□□□□□ -1.31
BDNF-203ENST00000395978 CSDE1O75534 798 aaKnown RBP6.88□□□□□ -1.31
BDNF-203ENST00000395978 APRTP07741 180 aa6.88□□□□□ -1.31
BDNF-203ENST00000395978 ADSSP30520 456 aa6.88□□□□□ -1.31
BDNF-203ENST00000395978 CTCFP49711 727 aaPredicted RBP6.88□□□□□ -1.31
BDNF-203ENST00000395978 VCPP55072 806 aaKnown RBP6.88□□□□□ -1.31
BDNF-203ENST00000395978 HADHBP55084 474 aaKnown RBP6.88□□□□□ -1.31
BDNF-203ENST00000395978 OTUD4Q01804 1114 aaKnown RBP6.88□□□□□ -1.31
BDNF-203ENST00000395978 CAPSQ13938 189 aa6.88□□□□□ -1.31
BDNF-203ENST00000395978 MORF4L2Q15014 288 aa6.88□□□□□ -1.31
BDNF-203ENST00000395978 FAM71DQ8N9W8 422 aa6.88□□□□□ -1.31
BDNF-203ENST00000395978 REPS2Q8NFH8 660 aa6.88□□□□□ -1.31
BDNF-203ENST00000395978 DEPDC1BQ8WUY9 529 aa6.88□□□□□ -1.31
BDNF-203ENST00000395978 TRAPPC12Q8WVT3 735 aa6.88□□□□□ -1.31
BDNF-203ENST00000395978 ALKBH8Q96BT7 664 aaKnown RBP6.88□□□□□ -1.31
BDNF-203ENST00000395978 FDXACB1Q9BRP7 624 aaPredicted RBP6.88□□□□□ -1.31
BDNF-203ENST00000395978 TMEM51Q9NW97 253 aa6.88□□□□□ -1.31
BDNF-203ENST00000395978 DPP3Q9NY33 737 aa6.88□□□□□ -1.31
BDNF-203ENST00000395978 RRN3P2A6NIE6 340 aa6.88□□□□□ -1.31
BDNF-203ENST00000395978 TRAPPC3O43617 180 aa6.88□□□□□ -1.31
BDNF-203ENST00000395978 LPXNO60711 386 aa6.88□□□□□ -1.31
BDNF-203ENST00000395978 GJB6O95452 261 aa6.88□□□□□ -1.31
BDNF-203ENST00000395978 NUDT17P0C025 328 aa6.88□□□□□ -1.31
BDNF-203ENST00000395978 ATICP31939 592 aa6.88□□□□□ -1.31
BDNF-203ENST00000395978 NOMO3P69849 1222 aa6.88□□□□□ -1.31
BDNF-203ENST00000395978 TMPRSS15P98073 1019 aa6.88□□□□□ -1.31
BDNF-203ENST00000395978 MTM1Q13496 603 aa6.88□□□□□ -1.31
BDNF-203ENST00000395978 PTK6Q13882 451 aa6.88□□□□□ -1.31
BDNF-203ENST00000395978 PHF13Q86YI8 300 aaPredicted RBP6.88□□□□□ -1.31
BDNF-203ENST00000395978 EMC1Q8N766 993 aa6.88□□□□□ -1.31
BDNF-203ENST00000395978 CNPY3Q9BT09 278 aa6.88□□□□□ -1.31
BDNF-203ENST00000395978 TMEM121Q9BTD3 319 aa6.88□□□□□ -1.31
BDNF-203ENST00000395978 ETNK1Q9HBU6 452 aa6.88□□□□□ -1.31
BDNF-203ENST00000395978 ERVK-5Q9HDB9 667 aa6.88□□□□□ -1.31
BDNF-203ENST00000395978 XPNPEP1Q9NQW7 623 aa6.88□□□□□ -1.31
BDNF-203ENST00000395978 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.88□□□□□ -1.31
BDNF-203ENST00000395978 PAK5Q9P286 719 aa6.88□□□□□ -1.31
BDNF-203ENST00000395978 GGT7Q9UJ14 662 aa6.88□□□□□ -1.31
BDNF-203ENST00000395978 DCTN4Q9UJW0 460 aa6.88□□□□□ -1.31
BDNF-203ENST00000395978 NOCTQ9UK39 431 aaKnown RBP6.88□□□□□ -1.31
BDNF-203ENST00000395978 PIN4Q9Y237 131 aaKnown RBP6.88□□□□□ -1.31
BDNF-203ENST00000395978 NR2E1Q9Y466 385 aa6.88□□□□□ -1.31
BDNF-203ENST00000395978 RPTORQ8N122 1335 aa6.88□□□□□ -1.31
BDNF-203ENST00000395978 GOLGA8RI6L899 631 aa6.87□□□□□ -1.31
BDNF-203ENST00000395978 CD4P01730 458 aa6.87□□□□□ -1.31
BDNF-203ENST00000395978 PDGFRBP09619 1106 aa6.87□□□□□ -1.31
BDNF-203ENST00000395978 MCF2P10911 925 aa6.87□□□□□ -1.31
BDNF-203ENST00000395978 FLT3P36888 993 aa6.87□□□□□ -1.31
BDNF-203ENST00000395978 TMEM62Q0P6H9 643 aa6.87□□□□□ -1.31
BDNF-203ENST00000395978 DGKDQ16760 1214 aa6.87□□□□□ -1.31
BDNF-203ENST00000395978 SDCCAG8Q86SQ7 713 aaPredicted RBP6.87□□□□□ -1.31
BDNF-203ENST00000395978 ZSWIM2Q8NEG5 633 aa6.87□□□□□ -1.31
BDNF-203ENST00000395978 TRPM4Q8TD43 1214 aa6.87□□□□□ -1.31
BDNF-203ENST00000395978 AFG1LQ8WV93 481 aa6.87□□□□□ -1.31
BDNF-203ENST00000395978 BORCS6Q96GS4 357 aa6.87□□□□□ -1.31
BDNF-203ENST00000395978 TMEM176AQ96HP8 235 aa6.87□□□□□ -1.31
BDNF-203ENST00000395978 DDX23Q9BUQ8 820 aaKnown RBP6.87□□□□□ -1.31
BDNF-203ENST00000395978 ASB7Q9H672 318 aa6.87□□□□□ -1.31
BDNF-203ENST00000395978 ECT2Q9H8V3 914 aa6.87□□□□□ -1.31
BDNF-203ENST00000395978 DDX20Q9UHI6 824 aaKnown RBP6.87□□□□□ -1.31
BDNF-203ENST00000395978 CHMP2BQ9UQN3 213 aa6.87□□□□□ -1.31
BDNF-203ENST00000395978 NAALADL1Q9UQQ1 740 aa6.87□□□□□ -1.31
BDNF-203ENST00000395978 STXBP5LQ9Y2K9 1186 aa6.87□□□□□ -1.31
BDNF-203ENST00000395978 ZMYM2Q9UBW7 1377 aa6.87□□□□□ -1.31
BDNF-203ENST00000395978 CCL15-CCL14A0A0B4J2E2 113 aa6.87□□□□□ -1.31
BDNF-203ENST00000395978 ARHGEF37A1IGU5 675 aa6.87□□□□□ -1.31
BDNF-203ENST00000395978 F8VP50 259 aa6.87□□□□□ -1.31
BDNF-203ENST00000395978 IRF6O14896 467 aa6.87□□□□□ -1.31
BDNF-203ENST00000395978 SPAG6O75602 509 aa6.87□□□□□ -1.31
BDNF-203ENST00000395978 ESRRAP11474 423 aaPredicted RBP6.87□□□□□ -1.31
BDNF-203ENST00000395978 CETPP11597 493 aa6.87□□□□□ -1.31
BDNF-203ENST00000395978 LCP1P13796 627 aa6.87□□□□□ -1.31
BDNF-203ENST00000395978 CALRP27797 417 aaKnown RBP6.87□□□□□ -1.31
BDNF-203ENST00000395978 RAP1GAPP47736 663 aa6.87□□□□□ -1.31
BDNF-203ENST00000395978 CNTNAP1P78357 1384 aa6.87□□□□□ -1.31
BDNF-203ENST00000395978 IRX4P78413 519 aa6.87□□□□□ -1.31
BDNF-203ENST00000395978 ZNF200P98182 395 aaPredicted RBP6.87□□□□□ -1.31
BDNF-203ENST00000395978 ZNF268Q14587 947 aaPredicted RBP6.87□□□□□ -1.31
BDNF-203ENST00000395978 TAF12Q16514 161 aa6.87□□□□□ -1.31
BDNF-203ENST00000395978 CCL15Q16663 113 aa6.87□□□□□ -1.31
BDNF-203ENST00000395978 TMCO4Q5TGY1 634 aa6.87□□□□□ -1.31
BDNF-203ENST00000395978 LRRC38Q5VT99 294 aa6.87□□□□□ -1.31
BDNF-203ENST00000395978 PARP9Q8IXQ6 854 aa6.87□□□□□ -1.31
BDNF-203ENST00000395978 MAF1Q9H063 256 aa6.87□□□□□ -1.31
BDNF-203ENST00000395978 PCDH9Q9HC56 1237 aa6.87□□□□□ -1.31
BDNF-203ENST00000395978 KLHL8Q9P2G9 620 aaPredicted RBP6.87□□□□□ -1.31
BDNF-203ENST00000395978 ZC3H7BQ9UGR2 993 aaKnown RBP6.87□□□□□ -1.31
BDNF-203ENST00000395978 ZNF214Q9UL59 606 aaPredicted RBP6.87□□□□□ -1.31
BDNF-203ENST00000395978 TAF1P21675 1872 aa6.87□□□□□ -1.31
BDNF-203ENST00000395978 MYO5AQ9Y4I1 1855 aaKnown RBP6.87□□□□□ -1.31
BDNF-203ENST00000395978 ARHGAP42A6NI28 874 aa6.87□□□□□ -1.31
BDNF-203ENST00000395978 ADM5C9JUS6 153 aa6.87□□□□□ -1.31
BDNF-203ENST00000395978 H3BRB1 525 aa6.87□□□□□ -1.31
BDNF-203ENST00000395978 H3BRJ5 948 aa6.87□□□□□ -1.31
BDNF-203ENST00000395978 CREB3O43889 395 aa6.87□□□□□ -1.31
BDNF-203ENST00000395978 ASS1P00966 412 aaKnown RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms