RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 FAM153CQ494X1 144 aa17.93■□□□□ 0.46
SIN3A-203ENST00000394949 EFL1Q7Z2Z2 1120 aaKnown RBP17.93■□□□□ 0.46
SIN3A-203ENST00000394949 URGCPQ8TCY9 931 aa17.93■□□□□ 0.46
SIN3A-203ENST00000394949 CNDP1Q96KN2 507 aa17.93■□□□□ 0.46
SIN3A-203ENST00000394949 FAM153AQ9UHL3 310 aa17.93■□□□□ 0.46
SIN3A-203ENST00000394949 PPP1R36Q96LQ0 422 aa17.92■□□□□ 0.46
SIN3A-203ENST00000394949 TRAPPC9Q96Q05 1148 aa17.92■□□□□ 0.46
SIN3A-203ENST00000394949 ZBED2Q9BTP6 218 aa17.92■□□□□ 0.46
SIN3A-203ENST00000394949 SCN3BQ9NY72 215 aa17.92■□□□□ 0.46
SIN3A-203ENST00000394949 ALBP02768 609 aa17.92■□□□□ 0.46
SIN3A-203ENST00000394949 CNTFP26441 200 aa17.92■□□□□ 0.46
SIN3A-203ENST00000394949 CDC42EP1Q00587 391 aa17.92■□□□□ 0.46
SIN3A-203ENST00000394949 PLOD1Q02809 727 aaPredicted RBP17.92■□□□□ 0.46
SIN3A-203ENST00000394949 MFSD14CQ5VZR4 134 aa17.92■□□□□ 0.46
SIN3A-203ENST00000394949 NAALADL1Q9UQQ1 740 aa17.92■□□□□ 0.46
SIN3A-203ENST00000394949 ATXN2Q99700 1313 aaKnown RBP17.92■□□□□ 0.46
SIN3A-203ENST00000394949 SALL1Q9NSC2 1324 aa17.92■□□□□ 0.46
SIN3A-203ENST00000394949 MKRN4PQ13434 485 aaPredicted RBP17.92■□□□□ 0.46
SIN3A-203ENST00000394949 TTMPQ5BVD1 217 aa17.92■□□□□ 0.46
SIN3A-203ENST00000394949 TSEN2Q8NCE0 465 aaKnown RBP17.92■□□□□ 0.46
SIN3A-203ENST00000394949 FAR2Q96K12 515 aa17.92■□□□□ 0.46
SIN3A-203ENST00000394949 PTPRMP28827 1452 aa17.92■□□□□ 0.46
SIN3A-203ENST00000394949 HNRNPCL2B2RXH8 293 aa17.91■□□□□ 0.46
SIN3A-203ENST00000394949 GRK2P25098 689 aa17.91■□□□□ 0.46
SIN3A-203ENST00000394949 SSTR3P32745 418 aaPredicted RBP17.91■□□□□ 0.46
SIN3A-203ENST00000394949 PDK1Q15118 436 aa17.91■□□□□ 0.46
SIN3A-203ENST00000394949 MROH9Q5TGP6 573 aa17.91■□□□□ 0.46
SIN3A-203ENST00000394949 BNC2Q6ZN30 1099 aaPredicted RBP17.91■□□□□ 0.46
SIN3A-203ENST00000394949 TNIP3Q96KP6 325 aa17.91■□□□□ 0.46
SIN3A-203ENST00000394949 BNIP3LO60238 219 aa17.91■□□□□ 0.46
SIN3A-203ENST00000394949 CALML6Q8TD86 181 aa17.91■□□□□ 0.46
SIN3A-203ENST00000394949 PTPRN2Q92932 1015 aa17.91■□□□□ 0.46
SIN3A-203ENST00000394949 PAFAH2Q99487 392 aa17.91■□□□□ 0.46
SIN3A-203ENST00000394949 ZC3H11AO75152 810 aaKnown RBP eCLIP17.91■□□□□ 0.46
SIN3A-203ENST00000394949 ALDH5A1P51649 535 aaPredicted RBP17.91■□□□□ 0.46
SIN3A-203ENST00000394949 TPI1P60174 286 aa17.91■□□□□ 0.46
SIN3A-203ENST00000394949 KRR1Q13601 381 aaKnown RBP17.91■□□□□ 0.46
SIN3A-203ENST00000394949 FAM71DQ8N9W8 422 aa17.91■□□□□ 0.46
SIN3A-203ENST00000394949 FBXO36Q8NEA4 188 aa17.91■□□□□ 0.46
SIN3A-203ENST00000394949 ZFRQ96KR1 1074 aaKnown RBP17.91■□□□□ 0.46
SIN3A-203ENST00000394949 CAMSAP1Q5T5Y3 1602 aa17.91■□□□□ 0.46
SIN3A-203ENST00000394949 MTSS1O43312 755 aa17.91■□□□□ 0.46
SIN3A-203ENST00000394949 MYO1DO94832 1006 aa17.91■□□□□ 0.46
SIN3A-203ENST00000394949 PDIA6Q15084 440 aa17.91■□□□□ 0.46
SIN3A-203ENST00000394949 RBBP7Q16576 425 aa17.91■□□□□ 0.46
SIN3A-203ENST00000394949 RNF219Q5W0B1 726 aaPredicted RBP17.91■□□□□ 0.46
SIN3A-203ENST00000394949 EXD1Q8NHP7 514 aa17.91■□□□□ 0.46
SIN3A-203ENST00000394949 JMJD4Q9H9V9 463 aa17.91■□□□□ 0.46
SIN3A-203ENST00000394949 TCN1P20061 433 aaPredicted RBP17.9■□□□□ 0.46
SIN3A-203ENST00000394949 KCNA1Q09470 495 aa17.9■□□□□ 0.46
SIN3A-203ENST00000394949 MRPL28Q13084 256 aaKnown RBP17.9■□□□□ 0.46
SIN3A-203ENST00000394949 BOLA3Q53S33 107 aa17.9■□□□□ 0.46
SIN3A-203ENST00000394949 FBXO33Q7Z6M2 555 aa17.9■□□□□ 0.46
SIN3A-203ENST00000394949 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.9■□□□□ 0.46
SIN3A-203ENST00000394949 KANSL1LA0AUZ9 987 aa17.9■□□□□ 0.46
SIN3A-203ENST00000394949 EXTL3O43909 919 aa17.9■□□□□ 0.46
SIN3A-203ENST00000394949 NME3Q13232 169 aa17.9■□□□□ 0.46
SIN3A-203ENST00000394949 MYBPC2Q14324 1141 aa17.9■□□□□ 0.46
SIN3A-203ENST00000394949 ILDR1Q86SU0 546 aaPredicted RBP17.9■□□□□ 0.46
SIN3A-203ENST00000394949 SLC26A11Q86WA9 606 aa17.9■□□□□ 0.46
SIN3A-203ENST00000394949 RNF149Q8NC42 400 aa17.9■□□□□ 0.46
SIN3A-203ENST00000394949 ATG4AQ8WYN0 398 aa17.9■□□□□ 0.46
SIN3A-203ENST00000394949 ARHGEF38Q9NXL2 777 aa17.9■□□□□ 0.46
SIN3A-203ENST00000394949 FRMPD1Q5SYB0 1578 aa17.9■□□□□ 0.46
SIN3A-203ENST00000394949 ZSCAN5CA6NGD5 496 aaPredicted RBP17.9■□□□□ 0.46
SIN3A-203ENST00000394949 TXNP10599 105 aaKnown RBP17.9■□□□□ 0.46
SIN3A-203ENST00000394949 FDFT1P37268 417 aa17.9■□□□□ 0.46
SIN3A-203ENST00000394949 ZNF786Q8N393 782 aa17.9■□□□□ 0.46
SIN3A-203ENST00000394949 TNIP2Q8NFZ5 429 aa17.9■□□□□ 0.46
SIN3A-203ENST00000394949 FAM151AQ8WW52 585 aa17.9■□□□□ 0.46
SIN3A-203ENST00000394949 NAT9Q9BTE0 207 aa17.9■□□□□ 0.46
SIN3A-203ENST00000394949 WDR47O94967 919 aa17.9■□□□□ 0.46
SIN3A-203ENST00000394949 PSMA4P25789 261 aaKnown RBP17.9■□□□□ 0.46
SIN3A-203ENST00000394949 GTF2H1P32780 548 aa17.9■□□□□ 0.46
SIN3A-203ENST00000394949 NUP93Q8N1F7 819 aa17.9■□□□□ 0.46
SIN3A-203ENST00000394949 EGFL8Q99944 293 aa17.9■□□□□ 0.46
SIN3A-203ENST00000394949 NIF3L1Q9GZT8 377 aa17.9■□□□□ 0.46
SIN3A-203ENST00000394949 C17orf75Q9HAS0 396 aa17.9■□□□□ 0.46
SIN3A-203ENST00000394949 OLA1Q9NTK5 396 aaKnown RBP17.9■□□□□ 0.46
SIN3A-203ENST00000394949 SKAP2O75563 359 aaPredicted RBP17.89■□□□□ 0.46
SIN3A-203ENST00000394949 CLK1P49759 484 aaKnown RBP17.89■□□□□ 0.46
SIN3A-203ENST00000394949 SYCP2LQ5T4T6 812 aa17.89■□□□□ 0.46
SIN3A-203ENST00000394949 B4GALNT2Q8NHY0 566 aa17.89■□□□□ 0.46
SIN3A-203ENST00000394949 KIF12Q96FN5 646 aa17.89■□□□□ 0.46
SIN3A-203ENST00000394949 RNPEPL1Q9HAU8 725 aa17.89■□□□□ 0.46
SIN3A-203ENST00000394949 SP110Q9HB58 689 aa17.89■□□□□ 0.46
SIN3A-203ENST00000394949 SHOC2Q9UQ13 582 aa17.89■□□□□ 0.46
SIN3A-203ENST00000394949 KDM6AO15550 1401 aaPredicted RBP17.89■□□□□ 0.46
SIN3A-203ENST00000394949 IQGAP1P46940 1657 aa17.89■□□□□ 0.45
SIN3A-203ENST00000394949 SLCO1B7G3V0H7 640 aa17.89■□□□□ 0.45
SIN3A-203ENST00000394949 PIK3CDO00329 1044 aa17.89■□□□□ 0.45
SIN3A-203ENST00000394949 PRKCBP05771 671 aa17.89■□□□□ 0.45
SIN3A-203ENST00000394949 GPD1P21695 349 aa17.89■□□□□ 0.45
SIN3A-203ENST00000394949 ADORA2BP29275 332 aa17.89■□□□□ 0.45
SIN3A-203ENST00000394949 CHRNA5P30532 468 aa17.89■□□□□ 0.45
SIN3A-203ENST00000394949 ACOT2P49753 483 aa17.89■□□□□ 0.45
SIN3A-203ENST00000394949 AQP5P55064 265 aa17.89■□□□□ 0.45
SIN3A-203ENST00000394949 PDAP1Q13442 181 aaKnown RBP17.89■□□□□ 0.45
SIN3A-203ENST00000394949 BAATQ14032 418 aaPredicted RBP17.89■□□□□ 0.45
SIN3A-203ENST00000394949 TFDP3Q5H9I0 405 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms