RNA–Protein interactions for RNA: ENST00000380285.7

SNX1-202, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 8,119 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-202ENST00000380285 ENOPH1Q9UHY7 261 aa9.97□□□□□ -0.81
SNX1-202ENST00000380285 IQGAP1P46940 1657 aa9.97□□□□□ -0.81
SNX1-202ENST00000380285 CRB1P82279 1406 aa9.97□□□□□ -0.81
SNX1-202ENST00000380285 CEP78Q5JTW2 689 aa9.97□□□□□ -0.81
SNX1-202ENST00000380285 ATG9AQ7Z3C6 839 aa9.97□□□□□ -0.81
SNX1-202ENST00000380285 TMPRSS6Q8IU80 811 aa9.97□□□□□ -0.81
SNX1-202ENST00000380285 NUP93Q8N1F7 819 aa9.97□□□□□ -0.81
SNX1-202ENST00000380285 CASP10Q92851 521 aa9.97□□□□□ -0.81
SNX1-202ENST00000380285 OPTNQ96CV9 577 aa9.97□□□□□ -0.81
SNX1-202ENST00000380285 PLEKHA8Q96JA3 519 aa9.97□□□□□ -0.81
SNX1-202ENST00000380285 TMEM51Q9NW97 253 aa9.97□□□□□ -0.81
SNX1-202ENST00000380285 TMEM161AQ9NX61 479 aa9.97□□□□□ -0.81
SNX1-202ENST00000380285 H2AFY2Q9P0M6 372 aaPredicted RBP9.97□□□□□ -0.81
SNX1-202ENST00000380285 MAGEB2O15479 319 aa9.97□□□□□ -0.81
SNX1-202ENST00000380285 RBP3P10745 1247 aa9.97□□□□□ -0.81
SNX1-202ENST00000380285 TTKP33981 857 aa9.97□□□□□ -0.81
SNX1-202ENST00000380285 NUDT2P50583 147 aa9.97□□□□□ -0.81
SNX1-202ENST00000380285 R3HDM1Q15032 1099 aaKnown RBP9.97□□□□□ -0.81
SNX1-202ENST00000380285 CRELD2Q6UXH1 353 aaPredicted RBP9.97□□□□□ -0.81
SNX1-202ENST00000380285 TAS2R42Q7RTR8 314 aa9.97□□□□□ -0.81
SNX1-202ENST00000380285 C17orf80Q9BSJ5 609 aa9.97□□□□□ -0.81
SNX1-202ENST00000380285 PARVBQ9HBI1 364 aa9.97□□□□□ -0.81
SNX1-202ENST00000380285 MTMR4Q9NYA4 1195 aa9.97□□□□□ -0.81
SNX1-202ENST00000380285 KIAA1257Q9ULG3 409 aa9.97□□□□□ -0.81
SNX1-202ENST00000380285 NEMP1O14524 444 aa9.96□□□□□ -0.81
SNX1-202ENST00000380285 SOAT2O75908 522 aa9.96□□□□□ -0.81
SNX1-202ENST00000380285 MDH1BQ5I0G3 518 aa9.96□□□□□ -0.81
SNX1-202ENST00000380285 AARS2Q5JTZ9 985 aaKnown RBP9.96□□□□□ -0.81
SNX1-202ENST00000380285 APOBEC3FQ8IUX4 373 aaKnown RBP9.96□□□□□ -0.81
SNX1-202ENST00000380285 C1orf131Q8NDD1 294 aaKnown RBP9.96□□□□□ -0.81
SNX1-202ENST00000380285 UBE2OQ9C0C9 1292 aaKnown RBP9.96□□□□□ -0.81
SNX1-202ENST00000380285 CAAP1Q9H8G2 361 aa9.96□□□□□ -0.81
SNX1-202ENST00000380285 KRCC1Q9NPI7 259 aaPredicted RBP9.96□□□□□ -0.81
SNX1-202ENST00000380285 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.96□□□□□ -0.81
SNX1-202ENST00000380285 CTNNAL1Q9UBT7 734 aa9.96□□□□□ -0.81
SNX1-202ENST00000380285 MARCOQ9UEW3 520 aaPredicted RBP9.96□□□□□ -0.81
SNX1-202ENST00000380285 CNTNAP5Q8WYK1 1306 aa9.96□□□□□ -0.81
SNX1-202ENST00000380285 NFIBO00712 420 aa9.96□□□□□ -0.81
SNX1-202ENST00000380285 NMT1P30419 496 aaKnown RBP9.96□□□□□ -0.81
SNX1-202ENST00000380285 FBXL16Q8N461 479 aa9.96□□□□□ -0.81
SNX1-202ENST00000380285 EXD1Q8NHP7 514 aa9.96□□□□□ -0.81
SNX1-202ENST00000380285 CPA5Q8WXQ8 436 aa9.96□□□□□ -0.81
SNX1-202ENST00000380285 BRD8Q9H0E9 1235 aa9.96□□□□□ -0.81
SNX1-202ENST00000380285 RPS6KA5O75582 802 aa9.96□□□□□ -0.81
SNX1-202ENST00000380285 ECM2O94769 699 aaPredicted RBP9.96□□□□□ -0.81
SNX1-202ENST00000380285 EIF2S1P05198 315 aaKnown RBP9.96□□□□□ -0.81
SNX1-202ENST00000380285 KRT20P35900 424 aa9.96□□□□□ -0.81
SNX1-202ENST00000380285 CIAPIN1Q6FI81 312 aa9.96□□□□□ -0.81
SNX1-202ENST00000380285 B4GALNT2Q8NHY0 566 aa9.96□□□□□ -0.81
SNX1-202ENST00000380285 TFB1MQ8WVM0 346 aaKnown RBP9.96□□□□□ -0.81
SNX1-202ENST00000380285 WNK4Q96J92 1243 aa9.96□□□□□ -0.81
SNX1-202ENST00000380285 FUCA2Q9BTY2 467 aa9.96□□□□□ -0.81
SNX1-202ENST00000380285 NT5C1AQ9BXI3 368 aa9.96□□□□□ -0.81
SNX1-202ENST00000380285 NIF3L1Q9GZT8 377 aa9.96□□□□□ -0.81
SNX1-202ENST00000380285 TRAPPC3O43617 180 aa9.96□□□□□ -0.82
SNX1-202ENST00000380285 PRKCBP05771 671 aa9.96□□□□□ -0.82
SNX1-202ENST00000380285 ANXA11P50995 505 aaKnown RBP9.96□□□□□ -0.82
SNX1-202ENST00000380285 PTENP60484 403 aa9.96□□□□□ -0.82
SNX1-202ENST00000380285 TMEM132DQ14C87 1099 aa9.96□□□□□ -0.82
SNX1-202ENST00000380285 LRRC8DQ7L1W4 858 aa9.96□□□□□ -0.82
SNX1-202ENST00000380285 CELF4Q9BZC1 486 aaKnown RBP9.96□□□□□ -0.82
SNX1-202ENST00000380285 TMEM94Q12767 1356 aa9.96□□□□□ -0.82
SNX1-202ENST00000380285 TRIM49D1C9J1S8 452 aa9.96□□□□□ -0.82
SNX1-202ENST00000380285 EEF2KO00418 725 aaKnown RBP9.96□□□□□ -0.82
SNX1-202ENST00000380285 OCM2P0CE71 109 aa9.96□□□□□ -0.82
SNX1-202ENST00000380285 OCMP0CE72 109 aaPredicted RBP9.96□□□□□ -0.82
SNX1-202ENST00000380285 TKTP29401 623 aaKnown RBP9.96□□□□□ -0.82
SNX1-202ENST00000380285 WASHC5Q12768 1159 aa9.96□□□□□ -0.82
SNX1-202ENST00000380285 IRGCQ6NXR0 463 aa9.96□□□□□ -0.82
SNX1-202ENST00000380285 PDCD6IPQ8WUM4 868 aaKnown RBP9.96□□□□□ -0.82
SNX1-202ENST00000380285 INPP5DQ92835 1189 aa9.96□□□□□ -0.82
SNX1-202ENST00000380285 OLFM1Q99784 485 aa9.96□□□□□ -0.82
SNX1-202ENST00000380285 ECSITQ9BQ95 431 aa9.96□□□□□ -0.82
SNX1-202ENST00000380285 RPL26L1Q9UNX3 145 aaKnown RBP9.96□□□□□ -0.82
SNX1-202ENST00000380285 MYO3AQ8NEV4 1616 aa9.96□□□□□ -0.82
SNX1-202ENST00000380285 ASB14A6NK59 587 aa9.96□□□□□ -0.82
SNX1-202ENST00000380285 KLHL41O60662 606 aa9.96□□□□□ -0.82
SNX1-202ENST00000380285 MAPK1P28482 360 aa9.96□□□□□ -0.82
SNX1-202ENST00000380285 MEI1Q5TIA1 1274 aa9.96□□□□□ -0.82
SNX1-202ENST00000380285 UNC45BQ8IWX7 931 aa9.96□□□□□ -0.82
SNX1-202ENST00000380285 SAMD3Q8N6K7 520 aa9.96□□□□□ -0.82
SNX1-202ENST00000380285 APPL2Q8NEU8 664 aa9.96□□□□□ -0.82
SNX1-202ENST00000380285 SLC30A5Q8TAD4 765 aa9.96□□□□□ -0.82
SNX1-202ENST00000380285 NSUN4Q96CB9 384 aaKnown RBP9.96□□□□□ -0.82
SNX1-202ENST00000380285 PRRG3Q9BZD7 231 aa9.96□□□□□ -0.82
SNX1-202ENST00000380285 SLC38A7Q9NVC3 462 aa9.96□□□□□ -0.82
SNX1-202ENST00000380285 IMPAD1Q9NX62 359 aa9.96□□□□□ -0.82
SNX1-202ENST00000380285 COPG2Q9UBF2 871 aa9.96□□□□□ -0.82
SNX1-202ENST00000380285 TNS3Q68CZ2 1445 aa9.96□□□□□ -0.82
SNX1-202ENST00000380285 XPO1O14980 1071 aaKnown RBP9.96□□□□□ -0.82
SNX1-202ENST00000380285 LSM8O95777 96 aaKnown RBP9.96□□□□□ -0.82
SNX1-202ENST00000380285 FAM58BPP0C7Q3 252 aa9.96□□□□□ -0.82
SNX1-202ENST00000380285 CDKAL1Q5VV42 579 aa9.96□□□□□ -0.82
SNX1-202ENST00000380285 SEL1L3Q68CR1 1132 aa9.96□□□□□ -0.82
SNX1-202ENST00000380285 AGR3Q8TD06 166 aa9.96□□□□□ -0.82
SNX1-202ENST00000380285 DDX20Q9UHI6 824 aaKnown RBP9.96□□□□□ -0.82
SNX1-202ENST00000380285 SORCS3Q9UPU3 1222 aa9.96□□□□□ -0.82
SNX1-202ENST00000380285 C15orf41Q9Y2V0 281 aa9.96□□□□□ -0.82
SNX1-202ENST00000380285 CST8O60676 142 aa9.95□□□□□ -0.82
SNX1-202ENST00000380285 ARIH2O95376 493 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms