RNA–Protein interactions for RNA: ENST00000377080.7

USP11-203, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 804 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-203ENST00000377080 FAM167AQ96KS9 214 aa10.6□□□□□ -0.71
USP11-203ENST00000377080 TGS1Q96RS0 853 aaKnown RBP10.6□□□□□ -0.71
USP11-203ENST00000377080 PI4K2AQ9BTU6 479 aa10.6□□□□□ -0.71
USP11-203ENST00000377080 DHRS4Q9BTZ2 278 aa10.6□□□□□ -0.71
USP11-203ENST00000377080 MSTO1Q9BUK6 570 aa10.6□□□□□ -0.71
USP11-203ENST00000377080 KIFC3Q9BVG8 833 aa10.6□□□□□ -0.71
USP11-203ENST00000377080 TEX13BQ9BXU2 312 aa10.6□□□□□ -0.71
USP11-203ENST00000377080 FRMD8Q9BZ67 464 aaPredicted RBP10.6□□□□□ -0.71
USP11-203ENST00000377080 CCDC113Q9H0I3 377 aa10.6□□□□□ -0.71
USP11-203ENST00000377080 ACAD9Q9H845 621 aa10.6□□□□□ -0.71
USP11-203ENST00000377080 APOBEC3GQ9HC16 384 aaKnown RBP10.6□□□□□ -0.71
USP11-203ENST00000377080 CD248Q9HCU0 757 aa10.6□□□□□ -0.71
USP11-203ENST00000377080 ZNF302Q9NR11 478 aa10.6□□□□□ -0.71
USP11-203ENST00000377080 FGFR1OP2Q9NVK5 253 aa10.6□□□□□ -0.71
USP11-203ENST00000377080 CYP39A1Q9NYL5 469 aa10.6□□□□□ -0.71
USP11-203ENST00000377080 ZMYND8Q9ULU4 1186 aaPredicted RBP10.6□□□□□ -0.71
USP11-203ENST00000377080 FZD1Q9UP38 647 aa10.6□□□□□ -0.71
USP11-203ENST00000377080 USH1CQ9Y6N9 552 aa10.6□□□□□ -0.71
USP11-203ENST00000377080 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.59□□□□□ -0.71
USP11-203ENST00000377080 hCG_1818297A0A087WSY0 165 aa10.59□□□□□ -0.71
USP11-203ENST00000377080 SIGLEC16A6NMB1 481 aa10.59□□□□□ -0.71
USP11-203ENST00000377080 RASA4BC9J798 803 aa10.59□□□□□ -0.71
USP11-203ENST00000377080 E7ESA3 106 aa10.59□□□□□ -0.71
USP11-203ENST00000377080 RASA4O43374 803 aa10.59□□□□□ -0.71
USP11-203ENST00000377080 MED7O43513 233 aa10.59□□□□□ -0.71
USP11-203ENST00000377080 MAFO75444 373 aaPredicted RBP10.59□□□□□ -0.71
USP11-203ENST00000377080 UNC5CO95185 931 aa10.59□□□□□ -0.71
USP11-203ENST00000377080 CDKN2BP42772 138 aa10.59□□□□□ -0.71
USP11-203ENST00000377080 IFNAR2P48551 515 aa10.59□□□□□ -0.71
USP11-203ENST00000377080 WDR4P57081 412 aaKnown RBP10.59□□□□□ -0.71
USP11-203ENST00000377080 NLRP11P59045 1033 aaKnown RBP10.59□□□□□ -0.71
USP11-203ENST00000377080 NOP14P78316 857 aaKnown RBP10.59□□□□□ -0.71
USP11-203ENST00000377080 IRX3P78415 501 aaPredicted RBP10.59□□□□□ -0.71
USP11-203ENST00000377080 MTMR2Q13614 643 aa10.59□□□□□ -0.71
USP11-203ENST00000377080 NCOA4Q13772 614 aa10.59□□□□□ -0.71
USP11-203ENST00000377080 SETDB1Q15047 1291 aa10.59□□□□□ -0.71
USP11-203ENST00000377080 EFHC2Q5JST6 749 aa10.59□□□□□ -0.71
USP11-203ENST00000377080 UBAP2Q5T6F2 1119 aaKnown RBP10.59□□□□□ -0.71
USP11-203ENST00000377080 RNASEH2BQ5TBB1 312 aaKnown RBP10.59□□□□□ -0.71
USP11-203ENST00000377080 IER5Q5VY09 327 aa10.59□□□□□ -0.71
USP11-203ENST00000377080 CATSPERGQ6ZRH7 1159 aa10.59□□□□□ -0.71
USP11-203ENST00000377080 GSTA5Q7RTV2 222 aa10.59□□□□□ -0.71
USP11-203ENST00000377080 CCDC60Q8IWA6 550 aaPredicted RBP10.59□□□□□ -0.71
USP11-203ENST00000377080 CYP4X1Q8N118 509 aa10.59□□□□□ -0.71
USP11-203ENST00000377080 AGGF1Q8N302 714 aaeCLIP10.59□□□□□ -0.71
USP11-203ENST00000377080 UHMK1Q8TAS1 419 aaKnown RBP10.59□□□□□ -0.71
USP11-203ENST00000377080 FBF1Q8TES7 1133 aa10.59□□□□□ -0.71
USP11-203ENST00000377080 TCP11Q8WWU5 503 aa10.59□□□□□ -0.71
USP11-203ENST00000377080 APBB2Q92870 758 aa10.59□□□□□ -0.71
USP11-203ENST00000377080 KLHL29Q96CT2 875 aa10.59□□□□□ -0.71
USP11-203ENST00000377080 SMC6Q96SB8 1091 aa10.59□□□□□ -0.71
USP11-203ENST00000377080 C11orf70Q9BRQ4 267 aa10.59□□□□□ -0.71
USP11-203ENST00000377080 VPS11Q9H270 941 aa10.59□□□□□ -0.71
USP11-203ENST00000377080 ECT2Q9H8V3 914 aa10.59□□□□□ -0.71
USP11-203ENST00000377080 SAR1AQ9NR31 198 aa10.59□□□□□ -0.71
USP11-203ENST00000377080 ABCF3Q9NUQ8 709 aa10.59□□□□□ -0.71
USP11-203ENST00000377080 ZNF148Q9UQR1 794 aa10.59□□□□□ -0.71
USP11-203ENST00000377080 FARP1Q9Y4F1 1045 aaPredicted RBP10.59□□□□□ -0.71
USP11-203ENST00000377080 RIPK3Q9Y572 518 aa10.59□□□□□ -0.71
USP11-203ENST00000377080 CEP83Q9Y592 693 aa10.59□□□□□ -0.71
USP11-203ENST00000377080 NUB1Q9Y5A7 615 aa10.59□□□□□ -0.71
USP11-203ENST00000377080 SNCAIPQ9Y6H5 919 aa10.59□□□□□ -0.71
USP11-203ENST00000377080 OTOFQ9HC10 1997 aa10.58□□□□□ -0.72
USP11-203ENST00000377080 EXOC1LA0A1B0GW35 172 aa10.58□□□□□ -0.72
USP11-203ENST00000377080 GSTTP1A0A1W2PQM5 241 aa10.58□□□□□ -0.72
USP11-203ENST00000377080 TM9SF1O15321 606 aa10.58□□□□□ -0.72
USP11-203ENST00000377080 KIF1CO43896 1103 aaKnown RBP10.58□□□□□ -0.72
USP11-203ENST00000377080 TYROBPO43914 113 aa10.58□□□□□ -0.72
USP11-203ENST00000377080 SPAG6O75602 509 aa10.58□□□□□ -0.72
USP11-203ENST00000377080 TOM1L1O75674 476 aa10.58□□□□□ -0.72
USP11-203ENST00000377080 ATP4AP20648 1035 aa10.58□□□□□ -0.72
USP11-203ENST00000377080 GCAP28676 217 aa10.58□□□□□ -0.72
USP11-203ENST00000377080 GEMIN4P57678 1058 aaKnown RBP10.58□□□□□ -0.72
USP11-203ENST00000377080 MXD4Q14582 209 aaPredicted RBP10.58□□□□□ -0.72
USP11-203ENST00000377080 CRYMQ14894 314 aa10.58□□□□□ -0.72
USP11-203ENST00000377080 HADHQ16836 314 aaKnown RBP10.58□□□□□ -0.72
USP11-203ENST00000377080 DUOXA2Q1HG44 320 aa10.58□□□□□ -0.72
USP11-203ENST00000377080 KLHL38Q2WGJ6 581 aa10.58□□□□□ -0.72
USP11-203ENST00000377080 CCDC38Q502W7 563 aa10.58□□□□□ -0.72
USP11-203ENST00000377080 CMPK2Q5EBM0 449 aa10.58□□□□□ -0.72
USP11-203ENST00000377080 NOL9Q5SY16 702 aaKnown RBP10.58□□□□□ -0.72
USP11-203ENST00000377080 FAM160B1Q5W0V3 765 aa10.58□□□□□ -0.72
USP11-203ENST00000377080 SNRNP48Q6IEG0 339 aaKnown RBP10.58□□□□□ -0.72
USP11-203ENST00000377080 DNAJC24Q6P3W2 148 aa10.58□□□□□ -0.72
USP11-203ENST00000377080 ADGRD1Q6QNK2 874 aa10.58□□□□□ -0.72
USP11-203ENST00000377080 BBS12Q6ZW61 710 aa10.58□□□□□ -0.72
USP11-203ENST00000377080 VSIG1Q86XK7 387 aa10.58□□□□□ -0.72
USP11-203ENST00000377080 IFNL1Q8IU54 200 aa10.58□□□□□ -0.72
USP11-203ENST00000377080 PPIL6Q8IXY8 311 aa10.58□□□□□ -0.72
USP11-203ENST00000377080 TTC39CQ8N584 583 aa10.58□□□□□ -0.72
USP11-203ENST00000377080 FITM2Q8N6M3 262 aa10.58□□□□□ -0.72
USP11-203ENST00000377080 CD99L2Q8TCZ2 262 aa10.58□□□□□ -0.72
USP11-203ENST00000377080 ATG4CQ96DT6 458 aa10.58□□□□□ -0.72
USP11-203ENST00000377080 ZNF333Q96JL9 665 aa10.58□□□□□ -0.72
USP11-203ENST00000377080 SH2D3AQ9BRG2 576 aa10.58□□□□□ -0.72
USP11-203ENST00000377080 HEMGNQ9BXL5 484 aa10.58□□□□□ -0.72
USP11-203ENST00000377080 MRPL4Q9BYD3 311 aaKnown RBP10.58□□□□□ -0.72
USP11-203ENST00000377080 NIF3L1Q9GZT8 377 aa10.58□□□□□ -0.72
USP11-203ENST00000377080 C2orf40Q9H1Z8 148 aa10.58□□□□□ -0.72
USP11-203ENST00000377080 LRMDAQ9H2I8 198 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms