RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 BFARQ9NZS9 450 aa16.68■□□□□ 0.26
CLSTN1-201ENST00000361311 TAC1P20366 129 aa16.68■□□□□ 0.26
CLSTN1-201ENST00000361311 IL10P22301 178 aa16.68■□□□□ 0.26
CLSTN1-201ENST00000361311 LBRQ14739 615 aaKnown RBP16.68■□□□□ 0.26
CLSTN1-201ENST00000361311 NLGN1Q8N2Q7 840 aa16.68■□□□□ 0.26
CLSTN1-201ENST00000361311 PWWP2AQ96N64 755 aa16.68■□□□□ 0.26
CLSTN1-201ENST00000361311 CCDC90BQ9GZT6 254 aa16.68■□□□□ 0.26
CLSTN1-201ENST00000361311 DNAJC16Q9Y2G8 782 aa16.68■□□□□ 0.26
CLSTN1-201ENST00000361311 DAGLAQ9Y4D2 1042 aa16.68■□□□□ 0.26
CLSTN1-201ENST00000361311 SRGAP2CP0DJJ0 459 aa16.68■□□□□ 0.26
CLSTN1-201ENST00000361311 DEFB107AQ8IZN7 70 aa16.68■□□□□ 0.26
CLSTN1-201ENST00000361311 LRRC57Q8N9N7 239 aa16.68■□□□□ 0.26
CLSTN1-201ENST00000361311 ETNPPLQ8TBG4 499 aa16.68■□□□□ 0.26
CLSTN1-201ENST00000361311 MMADHCQ9H3L0 296 aaPredicted RBP16.68■□□□□ 0.26
CLSTN1-201ENST00000361311 M0QYV0 167 aa16.67■□□□□ 0.26
CLSTN1-201ENST00000361311 EDF1O60869 148 aaKnown RBP16.67■□□□□ 0.26
CLSTN1-201ENST00000361311 NPTXRO95502 500 aa16.67■□□□□ 0.26
CLSTN1-201ENST00000361311 MAPRE2Q15555 327 aa16.67■□□□□ 0.26
CLSTN1-201ENST00000361311 ZCCHC9Q8N567 271 aaKnown RBP16.67■□□□□ 0.26
CLSTN1-201ENST00000361311 ZNF398Q8TD17 642 aa16.67■□□□□ 0.26
CLSTN1-201ENST00000361311 PYDC1Q8WXC3 89 aa16.67■□□□□ 0.26
CLSTN1-201ENST00000361311 NR1H4Q96RI1 486 aaPredicted RBP16.67■□□□□ 0.26
CLSTN1-201ENST00000361311 STX18Q9P2W9 335 aaKnown RBP16.67■□□□□ 0.26
CLSTN1-201ENST00000361311 GABBR1Q9UBS5 961 aa16.67■□□□□ 0.26
CLSTN1-201ENST00000361311 C2CD2LO14523 706 aa16.67■□□□□ 0.26
CLSTN1-201ENST00000361311 APOL1O14791 398 aa16.67■□□□□ 0.26
CLSTN1-201ENST00000361311 SERPINB2P05120 415 aa16.67■□□□□ 0.26
CLSTN1-201ENST00000361311 ACTR2P61160 394 aa16.67■□□□□ 0.26
CLSTN1-201ENST00000361311 KCNA1Q09470 495 aa16.67■□□□□ 0.26
CLSTN1-201ENST00000361311 MOXD1Q6UVY6 613 aa16.67■□□□□ 0.26
CLSTN1-201ENST00000361311 SLC26A11Q86WA9 606 aa16.67■□□□□ 0.26
CLSTN1-201ENST00000361311 ARHGEF19Q8IW93 802 aa16.67■□□□□ 0.26
CLSTN1-201ENST00000361311 POU5F2Q8N7G0 328 aa16.67■□□□□ 0.26
CLSTN1-201ENST00000361311 DHX38Q92620 1227 aaKnown RBP16.67■□□□□ 0.26
CLSTN1-201ENST00000361311 LRRC19Q9H756 370 aa16.67■□□□□ 0.26
CLSTN1-201ENST00000361311 ARHGEF3Q9NR81 526 aa16.67■□□□□ 0.26
CLSTN1-201ENST00000361311 OTUD4Q01804 1114 aaKnown RBP16.67■□□□□ 0.26
CLSTN1-201ENST00000361311 TFDP3Q5H9I0 405 aa16.67■□□□□ 0.26
CLSTN1-201ENST00000361311 RMDN3Q96TC7 470 aa16.67■□□□□ 0.26
CLSTN1-201ENST00000361311 E2F8A0AVK6 867 aa16.66■□□□□ 0.26
CLSTN1-201ENST00000361311 ESRRBO95718 433 aa16.66■□□□□ 0.26
CLSTN1-201ENST00000361311 NDUFB10O96000 172 aa16.66■□□□□ 0.26
CLSTN1-201ENST00000361311 CCDC15Q0P6D6 951 aa16.66■□□□□ 0.26
CLSTN1-201ENST00000361311 SLC27A3Q5K4L6 730 aa16.66■□□□□ 0.26
CLSTN1-201ENST00000361311 DENND2DQ9H6A0 471 aaPredicted RBP16.66■□□□□ 0.26
CLSTN1-201ENST00000361311 PKD2L2Q9NZM6 624 aa16.66■□□□□ 0.26
CLSTN1-201ENST00000361311 NARFQ9UHQ1 456 aa16.66■□□□□ 0.26
CLSTN1-201ENST00000361311 MEI4A8MW99 385 aa16.66■□□□□ 0.26
CLSTN1-201ENST00000361311 SFNP31947 248 aa16.66■□□□□ 0.26
CLSTN1-201ENST00000361311 DCTN2Q13561 401 aaKnown RBP16.66■□□□□ 0.26
CLSTN1-201ENST00000361311 FAM160B1Q5W0V3 765 aa16.66■□□□□ 0.26
CLSTN1-201ENST00000361311 ISLR2Q6UXK2 745 aa16.66■□□□□ 0.26
CLSTN1-201ENST00000361311 SLC5A4Q9NY91 659 aa16.66■□□□□ 0.26
CLSTN1-201ENST00000361311 NR2E1Q9Y466 385 aa16.66■□□□□ 0.26
CLSTN1-201ENST00000361311 MEGF6O75095 1541 aa16.66■□□□□ 0.26
CLSTN1-201ENST00000361311 SYCE1LA8MT33 242 aa16.66■□□□□ 0.26
CLSTN1-201ENST00000361311 LGR5O75473 907 aa16.66■□□□□ 0.26
CLSTN1-201ENST00000361311 CCND2P30279 289 aa16.66■□□□□ 0.26
CLSTN1-201ENST00000361311 CRKP46108 304 aa16.66■□□□□ 0.26
CLSTN1-201ENST00000361311 ITKQ08881 620 aa16.66■□□□□ 0.26
CLSTN1-201ENST00000361311 FOXR2Q6PJQ5 311 aa16.66■□□□□ 0.26
CLSTN1-201ENST00000361311 SETD3Q86TU7 594 aaPredicted RBP16.66■□□□□ 0.26
CLSTN1-201ENST00000361311 MED10Q9BTT4 135 aa16.66■□□□□ 0.26
CLSTN1-201ENST00000361311 DHX35Q9H5Z1 703 aaKnown RBP16.66■□□□□ 0.26
CLSTN1-201ENST00000361311 PCDH9Q9HC56 1237 aa16.66■□□□□ 0.26
CLSTN1-201ENST00000361311 RIMS1Q86UR5 1692 aaKnown RBP16.66■□□□□ 0.26
CLSTN1-201ENST00000361311 PGM3O95394 542 aa16.66■□□□□ 0.26
CLSTN1-201ENST00000361311 ALADP13716 330 aa16.66■□□□□ 0.26
CLSTN1-201ENST00000361311 FAXCQ5TGI0 409 aa16.66■□□□□ 0.26
CLSTN1-201ENST00000361311 GALNT15Q8N3T1 639 aa16.66■□□□□ 0.26
CLSTN1-201ENST00000361311 TBC1D16Q8TBP0 767 aa16.66■□□□□ 0.26
CLSTN1-201ENST00000361311 RBM46Q8TBY0 533 aaKnown RBP16.66■□□□□ 0.26
CLSTN1-201ENST00000361311 TAS1R2Q8TE23 839 aa16.66■□□□□ 0.26
CLSTN1-201ENST00000361311 TMEM109Q9BVC6 243 aa16.66■□□□□ 0.26
CLSTN1-201ENST00000361311 TIPINQ9BVW5 301 aa16.66■□□□□ 0.26
CLSTN1-201ENST00000361311 POLR3FQ9H1D9 316 aaPredicted RBP16.66■□□□□ 0.26
CLSTN1-201ENST00000361311 RPF1Q9H9Y2 349 aaKnown RBP16.66■□□□□ 0.26
CLSTN1-201ENST00000361311 MAN1A2O60476 641 aa16.65■□□□□ 0.26
CLSTN1-201ENST00000361311 FAM58BPP0C7Q3 252 aa16.65■□□□□ 0.26
CLSTN1-201ENST00000361311 POU5F1BQ06416 359 aa16.65■□□□□ 0.26
CLSTN1-201ENST00000361311 CLEC16AQ2KHT3 1053 aa16.65■□□□□ 0.26
CLSTN1-201ENST00000361311 OTOAQ7RTW8 1153 aa16.65■□□□□ 0.26
CLSTN1-201ENST00000361311 GPR141Q7Z602 305 aa16.65■□□□□ 0.26
CLSTN1-201ENST00000361311 NOP9Q86U38 636 aaKnown RBP16.65■□□□□ 0.26
CLSTN1-201ENST00000361311 ATXN10Q9UBB4 475 aa16.65■□□□□ 0.26
CLSTN1-201ENST00000361311 ZNF229Q9UJW7 825 aa16.65■□□□□ 0.26
CLSTN1-201ENST00000361311 MROH7Q68CQ1 1323 aa16.65■□□□□ 0.26
CLSTN1-201ENST00000361311 ZBTB39O15060 712 aa16.65■□□□□ 0.26
CLSTN1-201ENST00000361311 VCAM1P19320 739 aa16.65■□□□□ 0.26
CLSTN1-201ENST00000361311 TBL3Q12788 808 aaKnown RBP16.65■□□□□ 0.26
CLSTN1-201ENST00000361311 SLC12A1Q13621 1099 aa16.65■□□□□ 0.26
CLSTN1-201ENST00000361311 NCOA4Q13772 614 aa16.65■□□□□ 0.26
CLSTN1-201ENST00000361311 TCHHL1Q5QJ38 904 aaPredicted RBP16.65■□□□□ 0.26
CLSTN1-201ENST00000361311 B3GNT6Q6ZMB0 384 aa16.65■□□□□ 0.26
CLSTN1-201ENST00000361311 ACTL9Q8TC94 416 aa16.65■□□□□ 0.26
CLSTN1-201ENST00000361311 WDR60Q8WVS4 1066 aa16.65■□□□□ 0.26
CLSTN1-201ENST00000361311 GCNAQ96QF7 691 aa16.65■□□□□ 0.26
CLSTN1-201ENST00000361311 RSAD1Q9HA92 442 aa16.65■□□□□ 0.26
CLSTN1-201ENST00000361311 GID8Q9NWU2 228 aa16.65■□□□□ 0.26
CLSTN1-201ENST00000361311 ATRNO75882 1429 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms