RNA–Protein interactions for RNA: ENST00000336604.8

IFFO1-201, Transcript of intermediate filament family orphan 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene IFFO1, Length 2,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-201ENST00000336604 EME2A4GXA9 379 aaPredicted RBP18.75■□□□□ 0.59
IFFO1-201ENST00000336604 PPP1R15BQ5SWA1 713 aa18.75■□□□□ 0.59
IFFO1-201ENST00000336604 RNF43Q68DV7 783 aa18.75■□□□□ 0.59
IFFO1-201ENST00000336604 PPP1R2P3Q6NXS1 205 aa18.75■□□□□ 0.59
IFFO1-201ENST00000336604 CEP128Q6ZU80 1094 aa18.75■□□□□ 0.59
IFFO1-201ENST00000336604 DENND1AQ8TEH3 1009 aa18.75■□□□□ 0.59
IFFO1-201ENST00000336604 PRPF31Q8WWY3 499 aaKnown RBP18.75■□□□□ 0.59
IFFO1-201ENST00000336604 CAMKK2Q96RR4 588 aa18.75■□□□□ 0.59
IFFO1-201ENST00000336604 NIFKQ9BYG3 293 aaKnown RBP18.75■□□□□ 0.59
IFFO1-201ENST00000336604 ARHGEF3Q9NR81 526 aa18.75■□□□□ 0.59
IFFO1-201ENST00000336604 A0A1W2PPM1 405 aa18.74■□□□□ 0.59
IFFO1-201ENST00000336604 ENO4A6NNW6 628 aa18.74■□□□□ 0.59
IFFO1-201ENST00000336604 GMPSP49915 693 aaPredicted RBP18.74■□□□□ 0.59
IFFO1-201ENST00000336604 GDF10P55107 478 aa18.74■□□□□ 0.59
IFFO1-201ENST00000336604 CATSPERGQ6ZRH7 1159 aa18.74■□□□□ 0.59
IFFO1-201ENST00000336604 ASRGL1Q7L266 308 aa18.74■□□□□ 0.59
IFFO1-201ENST00000336604 WDR49Q8IV35 697 aa18.74■□□□□ 0.59
IFFO1-201ENST00000336604 KCNN1Q92952 543 aa18.74■□□□□ 0.59
IFFO1-201ENST00000336604 NOP53Q9NZM5 478 aaKnown RBP18.74■□□□□ 0.59
IFFO1-201ENST00000336604 PHIPQ8WWQ0 1821 aa18.74■□□□□ 0.59
IFFO1-201ENST00000336604 SPDYE16A6NNV3 312 aaPredicted RBP18.74■□□□□ 0.59
IFFO1-201ENST00000336604 LSM8O95777 96 aaKnown RBP18.74■□□□□ 0.59
IFFO1-201ENST00000336604 UBA1P22314 1058 aaKnown RBP18.74■□□□□ 0.59
IFFO1-201ENST00000336604 RFC1P35251 1148 aaPredicted RBP18.74■□□□□ 0.59
IFFO1-201ENST00000336604 CCDC142Q17RM4 750 aa18.74■□□□□ 0.59
IFFO1-201ENST00000336604 DCAF15Q66K64 600 aa18.74■□□□□ 0.59
IFFO1-201ENST00000336604 ERICH1Q86X53 443 aa18.74■□□□□ 0.59
IFFO1-201ENST00000336604 TDRPQ86YL5 185 aa18.74■□□□□ 0.59
IFFO1-201ENST00000336604 L3MBTL3Q96JM7 780 aaPredicted RBP18.74■□□□□ 0.59
IFFO1-201ENST00000336604 SMC6Q96SB8 1091 aa18.74■□□□□ 0.59
IFFO1-201ENST00000336604 NIF3L1Q9GZT8 377 aa18.74■□□□□ 0.59
IFFO1-201ENST00000336604 TMEM134Q9H6X4 195 aa18.74■□□□□ 0.59
IFFO1-201ENST00000336604 ZWILCHQ9H900 591 aa18.74■□□□□ 0.59
IFFO1-201ENST00000336604 PHTF1Q9UMS5 762 aa18.74■□□□□ 0.59
IFFO1-201ENST00000336604 DRG1Q9Y295 367 aaKnown RBP18.74■□□□□ 0.59
IFFO1-201ENST00000336604 ATP2A1O14983 1001 aa18.73■□□□□ 0.59
IFFO1-201ENST00000336604 ALOX15BO15296 676 aa18.73■□□□□ 0.59
IFFO1-201ENST00000336604 MSCO60682 206 aa18.73■□□□□ 0.59
IFFO1-201ENST00000336604 ITGBL1O95965 494 aaPredicted RBP18.73■□□□□ 0.59
IFFO1-201ENST00000336604 ITGAVP06756 1048 aa18.73■□□□□ 0.59
IFFO1-201ENST00000336604 CA4P22748 312 aa18.73■□□□□ 0.59
IFFO1-201ENST00000336604 IRX1P78414 480 aaPredicted RBP18.73■□□□□ 0.59
IFFO1-201ENST00000336604 TFAMQ00059 246 aaKnown RBP18.73■□□□□ 0.59
IFFO1-201ENST00000336604 NR1H3Q13133 447 aa18.73■□□□□ 0.59
IFFO1-201ENST00000336604 BIRC2Q13490 618 aa18.73■□□□□ 0.59
IFFO1-201ENST00000336604 PIGHQ14442 188 aaPredicted RBP18.73■□□□□ 0.59
IFFO1-201ENST00000336604 NKD2Q969F2 451 aaPredicted RBP18.73■□□□□ 0.59
IFFO1-201ENST00000336604 C12orf42Q96LP6 360 aa18.73■□□□□ 0.59
IFFO1-201ENST00000336604 GJA3Q9Y6H8 435 aa18.73■□□□□ 0.59
IFFO1-201ENST00000336604 TNS1Q9HBL0 1735 aaKnown RBP18.73■□□□□ 0.59
IFFO1-201ENST00000336604 PRPF4O43172 522 aaKnown RBP eCLIP18.73■□□□□ 0.59
IFFO1-201ENST00000336604 UPP2O95045 317 aa18.73■□□□□ 0.59
IFFO1-201ENST00000336604 SRGAP2CP0DJJ0 459 aa18.73■□□□□ 0.59
IFFO1-201ENST00000336604 EFTUD2Q15029 972 aaKnown RBP eCLIP18.73■□□□□ 0.593e-6■■■■■ 29.7
IFFO1-201ENST00000336604 SLC1A5Q15758 541 aa18.73■□□□□ 0.59
IFFO1-201ENST00000336604 ANKRD22Q5VYY1 191 aa18.73■□□□□ 0.59
IFFO1-201ENST00000336604 ZNF772Q68DY9 489 aaPredicted RBP18.73■□□□□ 0.59
IFFO1-201ENST00000336604 CENPUQ71F23 418 aa18.73■□□□□ 0.59
IFFO1-201ENST00000336604 ARMC2Q8NEN0 867 aa18.73■□□□□ 0.59
IFFO1-201ENST00000336604 ZNF483Q8TF39 744 aaPredicted RBP18.73■□□□□ 0.59
IFFO1-201ENST00000336604 GRAMD1AQ96CP6 724 aa18.73■□□□□ 0.59
IFFO1-201ENST00000336604 FAM167BQ9BTA0 163 aa18.73■□□□□ 0.59
IFFO1-201ENST00000336604 PCDH9Q9HC56 1237 aa18.73■□□□□ 0.59
IFFO1-201ENST00000336604 UBN1Q9NPG3 1134 aa18.73■□□□□ 0.59
IFFO1-201ENST00000336604 AGTPBP1Q9UPW5 1226 aa18.73■□□□□ 0.59
IFFO1-201ENST00000336604 SHOC2Q9UQ13 582 aa18.73■□□□□ 0.59
IFFO1-201ENST00000336604 IGKV6D-21A0A0A0MT36 114 aa18.72■□□□□ 0.59
IFFO1-201ENST00000336604 C3orf70A6NLC5 250 aaPredicted RBP18.72■□□□□ 0.59
IFFO1-201ENST00000336604 TOM1L1O75674 476 aa18.72■□□□□ 0.59
IFFO1-201ENST00000336604 IL1R2P27930 398 aa18.72■□□□□ 0.59
IFFO1-201ENST00000336604 GPX6P59796 221 aa18.72■□□□□ 0.59
IFFO1-201ENST00000336604 GRIK3Q13003 919 aa18.72■□□□□ 0.59
IFFO1-201ENST00000336604 ACVR2BQ13705 512 aa18.72■□□□□ 0.59
IFFO1-201ENST00000336604 SPARCL1Q14515 664 aa18.72■□□□□ 0.59
IFFO1-201ENST00000336604 TARBP2Q15633 366 aaKnown RBP18.72■□□□□ 0.59
IFFO1-201ENST00000336604 HIF1AQ16665 826 aa18.72■□□□□ 0.59
IFFO1-201ENST00000336604 CAPRIN2Q6IMN6 1127 aaKnown RBP18.72■□□□□ 0.59
IFFO1-201ENST00000336604 SLC35B2Q8TB61 432 aa18.72■□□□□ 0.59
IFFO1-201ENST00000336604 ACTL9Q8TC94 416 aa18.72■□□□□ 0.59
IFFO1-201ENST00000336604 ZNF668Q96K58 619 aaPredicted RBP18.72■□□□□ 0.59
IFFO1-201ENST00000336604 ZNF112Q9UJU3 913 aa18.72■□□□□ 0.59
IFFO1-201ENST00000336604 FARP2O94887 1054 aaPredicted RBP18.72■□□□□ 0.59
IFFO1-201ENST00000336604 UNC5CO95185 931 aa18.72■□□□□ 0.59
IFFO1-201ENST00000336604 ALADP13716 330 aa18.72■□□□□ 0.59
IFFO1-201ENST00000336604 CCNB1P14635 433 aa18.72■□□□□ 0.59
IFFO1-201ENST00000336604 SSTR1P30872 391 aa18.72■□□□□ 0.59
IFFO1-201ENST00000336604 MSH2P43246 934 aa18.72■□□□□ 0.59
IFFO1-201ENST00000336604 CTCFP49711 727 aaPredicted RBP18.72■□□□□ 0.59
IFFO1-201ENST00000336604 OSTNP61366 133 aa18.72■□□□□ 0.59
IFFO1-201ENST00000336604 OTUD4Q01804 1114 aaKnown RBP18.72■□□□□ 0.59
IFFO1-201ENST00000336604 PTPN20Q4JDL3 420 aa18.72■□□□□ 0.59
IFFO1-201ENST00000336604 MSS51Q4VC12 460 aa18.72■□□□□ 0.59
IFFO1-201ENST00000336604 KIAA0319LQ8IZA0 1049 aa18.72■□□□□ 0.59
IFFO1-201ENST00000336604 ARFGAP1Q8N6T3 406 aa18.72■□□□□ 0.59
IFFO1-201ENST00000336604 ERP27Q96DN0 273 aa18.72■□□□□ 0.59
IFFO1-201ENST00000336604 MAK16Q9BXY0 300 aaKnown RBP18.72■□□□□ 0.59
IFFO1-201ENST00000336604 MYLK2Q9H1R3 596 aa18.72■□□□□ 0.59
IFFO1-201ENST00000336604 ETNK1Q9HBU6 452 aa18.72■□□□□ 0.59
IFFO1-201ENST00000336604 STARD13Q9Y3M8 1113 aa18.72■□□□□ 0.59
IFFO1-201ENST00000336604 CLUHO75153 1309 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms