RNA–Protein interactions for RNA: ENST00000336057.9

HDAC5-202, Transcript of histone deacetylase 5, humanhuman

TSL 1 (best) BASIC

Gene HDAC5, Length 5,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-202ENST00000336057 NEMP1O14524 444 aa16.43■□□□□ 0.22
HDAC5-202ENST00000336057 PSMD3O43242 534 aa16.43■□□□□ 0.22
HDAC5-202ENST00000336057 SAMD7Q7Z3H4 446 aa16.43■□□□□ 0.22
HDAC5-202ENST00000336057 LRP10Q7Z4F1 713 aa16.43■□□□□ 0.22
HDAC5-202ENST00000336057 CATSPER1Q8NEC5 780 aa16.43■□□□□ 0.22
HDAC5-202ENST00000336057 PPP1R36Q96LQ0 422 aa16.43■□□□□ 0.22
HDAC5-202ENST00000336057 IFT172Q9UG01 1749 aa16.42■□□□□ 0.22
HDAC5-202ENST00000336057 SYF2O95926 243 aaKnown RBP16.42■□□□□ 0.22
HDAC5-202ENST00000336057 USP10Q14694 798 aaKnown RBP16.42■□□□□ 0.22
HDAC5-202ENST00000336057 CMTM5Q96DZ9 223 aa16.42■□□□□ 0.22
HDAC5-202ENST00000336057 KCNMB3Q9NPA1 279 aa16.42■□□□□ 0.22
HDAC5-202ENST00000336057 LSM8O95777 96 aaKnown RBP16.42■□□□□ 0.22
HDAC5-202ENST00000336057 TNFRSF8P28908 595 aa16.42■□□□□ 0.22
HDAC5-202ENST00000336057 MED21Q13503 144 aa16.42■□□□□ 0.22
HDAC5-202ENST00000336057 ABRAQ8N0Z2 381 aa16.42■□□□□ 0.22
HDAC5-202ENST00000336057 CEP70Q8NHQ1 597 aa16.42■□□□□ 0.22
HDAC5-202ENST00000336057 BAP1Q92560 729 aa16.42■□□□□ 0.22
HDAC5-202ENST00000336057 PRDM4Q9UKN5 801 aa16.42■□□□□ 0.22
HDAC5-202ENST00000336057 PCDHA3Q9Y5H8 950 aa16.42■□□□□ 0.22
HDAC5-202ENST00000336057 HNRNPH3P31942 346 aaKnown RBP16.42■□□□□ 0.22
HDAC5-202ENST00000336057 EFHC1Q5JVL4 640 aa16.42■□□□□ 0.22
HDAC5-202ENST00000336057 APOBEC3HQ6NTF7 200 aaKnown RBP16.42■□□□□ 0.22
HDAC5-202ENST00000336057 PRPF39Q86UA1 669 aaKnown RBP16.42■□□□□ 0.22
HDAC5-202ENST00000336057 TEX9Q8N6V9 391 aa16.42■□□□□ 0.22
HDAC5-202ENST00000336057 TMEM121Q9BTD3 319 aa16.42■□□□□ 0.22
HDAC5-202ENST00000336057 KCNQ5Q9NR82 932 aa16.42■□□□□ 0.22
HDAC5-202ENST00000336057 RARBP10826 455 aa16.42■□□□□ 0.22
HDAC5-202ENST00000336057 DYNC1I2Q13409 638 aaKnown RBP16.42■□□□□ 0.22
HDAC5-202ENST00000336057 CBWD6Q4V339 395 aa16.42■□□□□ 0.22
HDAC5-202ENST00000336057 CBWD3Q5JTY5 395 aa16.42■□□□□ 0.22
HDAC5-202ENST00000336057 CBWD5Q5RIA9 395 aa16.42■□□□□ 0.22
HDAC5-202ENST00000336057 TNFRSF25Q93038 417 aa16.42■□□□□ 0.22
HDAC5-202ENST00000336057 TASP1Q9H6P5 420 aa16.42■□□□□ 0.22
HDAC5-202ENST00000336057 RNF181Q9P0P0 153 aa16.42■□□□□ 0.22
HDAC5-202ENST00000336057 ARHGAP10A1A4S6 786 aa16.41■□□□□ 0.22
HDAC5-202ENST00000336057 RARAP10276 462 aa16.41■□□□□ 0.22
HDAC5-202ENST00000336057 CASP5P51878 434 aa16.41■□□□□ 0.22
HDAC5-202ENST00000336057 RHBDL3P58872 404 aa16.41■□□□□ 0.22
HDAC5-202ENST00000336057 AMPD2Q01433 879 aa16.41■□□□□ 0.22
HDAC5-202ENST00000336057 TMED1Q13445 227 aa16.41■□□□□ 0.22
HDAC5-202ENST00000336057 DCAF6Q58WW2 860 aa16.41■□□□□ 0.22
HDAC5-202ENST00000336057 FAXCQ5TGI0 409 aa16.41■□□□□ 0.22
HDAC5-202ENST00000336057 CXorf38Q8TB03 319 aa16.41■□□□□ 0.22
HDAC5-202ENST00000336057 AFG1LQ8WV93 481 aa16.41■□□□□ 0.22
HDAC5-202ENST00000336057 DCLK3Q9C098 648 aa16.41■□□□□ 0.22
HDAC5-202ENST00000336057 VPS33BQ9H267 617 aa16.41■□□□□ 0.22
HDAC5-202ENST00000336057 YY1AP1Q9H869 796 aa16.41■□□□□ 0.22
HDAC5-202ENST00000336057 HEY2Q9UBP5 337 aa16.41■□□□□ 0.22
HDAC5-202ENST00000336057 HACL1Q9UJ83 578 aa16.41■□□□□ 0.22
HDAC5-202ENST00000336057 CYP3A4P08684 503 aa16.41■□□□□ 0.22
HDAC5-202ENST00000336057 FGRP09769 529 aa16.41■□□□□ 0.22
HDAC5-202ENST00000336057 SETSIPP0DME0 302 aa16.41■□□□□ 0.22
HDAC5-202ENST00000336057 C1QBPQ07021 282 aaKnown RBP16.41■□□□□ 0.22
HDAC5-202ENST00000336057 KCNA1Q09470 495 aa16.41■□□□□ 0.22
HDAC5-202ENST00000336057 LRRC36Q1X8D7 754 aa16.41■□□□□ 0.22
HDAC5-202ENST00000336057 KDELC2Q7Z4H8 507 aa16.41■□□□□ 0.22
HDAC5-202ENST00000336057 CDC26Q8NHZ8 85 aa16.41■□□□□ 0.22
HDAC5-202ENST00000336057 NCLNQ969V3 563 aa16.41■□□□□ 0.22
HDAC5-202ENST00000336057 IDI2Q9BXS1 227 aa16.41■□□□□ 0.22
HDAC5-202ENST00000336057 SLC24A2Q9UI40 661 aa16.41■□□□□ 0.22
HDAC5-202ENST00000336057 HAO1Q9UJM8 370 aa16.41■□□□□ 0.22
HDAC5-202ENST00000336057 NAALADL1Q9UQQ1 740 aa16.41■□□□□ 0.22
HDAC5-202ENST00000336057 GAKO14976 1311 aa16.41■□□□□ 0.22
HDAC5-202ENST00000336057 CCDC78A2IDD5 438 aa16.41■□□□□ 0.22
HDAC5-202ENST00000336057 BNIP3LO60238 219 aa16.41■□□□□ 0.22
HDAC5-202ENST00000336057 UBOX5O94941 541 aa16.41■□□□□ 0.22
HDAC5-202ENST00000336057 BACE1P56817 501 aa16.41■□□□□ 0.22
HDAC5-202ENST00000336057 GCNT1Q02742 428 aa16.41■□□□□ 0.22
HDAC5-202ENST00000336057 GRIK5Q16478 980 aa16.41■□□□□ 0.22
HDAC5-202ENST00000336057 PTPRN2Q92932 1015 aa16.41■□□□□ 0.22
HDAC5-202ENST00000336057 FER1L4A9Z1Z3 1794 aa16.41■□□□□ 0.22
HDAC5-202ENST00000336057 CPA2P48052 419 aa16.41■□□□□ 0.22
HDAC5-202ENST00000336057 LRRC8EQ6NSJ5 796 aa16.41■□□□□ 0.22
HDAC5-202ENST00000336057 DDIASQ8IXT1 998 aa16.41■□□□□ 0.22
HDAC5-202ENST00000336057 ASAP3Q8TDY4 903 aa16.41■□□□□ 0.22
HDAC5-202ENST00000336057 ZKSCAN4Q969J2 545 aaPredicted RBP16.41■□□□□ 0.22
HDAC5-202ENST00000336057 ING2Q9H160 280 aa16.41■□□□□ 0.22
HDAC5-202ENST00000336057 CISHQ9NSE2 258 aa16.41■□□□□ 0.22
HDAC5-202ENST00000336057 SLIT3O75094 1523 aa16.4■□□□□ 0.22
HDAC5-202ENST00000336057 UBA6A0AVT1 1052 aaPredicted RBP16.4■□□□□ 0.22
HDAC5-202ENST00000336057 ZBTB39O15060 712 aa16.4■□□□□ 0.22
HDAC5-202ENST00000336057 MYL2P10916 166 aa16.4■□□□□ 0.22
HDAC5-202ENST00000336057 TRADDQ15628 312 aa16.4■□□□□ 0.22
HDAC5-202ENST00000336057 TTMPQ5BVD1 217 aa16.4■□□□□ 0.22
HDAC5-202ENST00000336057 PGM2Q96G03 612 aa16.4■□□□□ 0.22
HDAC5-202ENST00000336057 PAFAH2Q99487 392 aa16.4■□□□□ 0.22
HDAC5-202ENST00000336057 C20orf96Q9NUD7 363 aaPredicted RBP16.4■□□□□ 0.22
HDAC5-202ENST00000336057 CDY2AQ9Y6F7 541 aa16.4■□□□□ 0.22
HDAC5-202ENST00000336057 CDY1Q9Y6F8 540 aa16.4■□□□□ 0.22
HDAC5-202ENST00000336057 C3P01024 1663 aa16.4■□□□□ 0.22
HDAC5-202ENST00000336057 CYP2C8P10632 490 aa16.4■□□□□ 0.22
HDAC5-202ENST00000336057 GHRP10912 638 aa16.4■□□□□ 0.22
HDAC5-202ENST00000336057 DPEP1P16444 411 aa16.4■□□□□ 0.22
HDAC5-202ENST00000336057 EEF1DP29692 281 aaKnown RBP16.4■□□□□ 0.22
HDAC5-202ENST00000336057 TMEM62Q0P6H9 643 aa16.4■□□□□ 0.22
HDAC5-202ENST00000336057 PGM5Q15124 567 aa16.4■□□□□ 0.22
HDAC5-202ENST00000336057 CNGA3Q16281 694 aa16.4■□□□□ 0.22
HDAC5-202ENST00000336057 MPZL3Q6UWV2 235 aa16.4■□□□□ 0.22
HDAC5-202ENST00000336057 USP33Q8TEY7 942 aa16.4■□□□□ 0.22
HDAC5-202ENST00000336057 REXO2Q9Y3B8 237 aaKnown RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms