RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 NPHP3-ACAD11A0A0J9YXS1 232 aa17.04■□□□□ 0.32
PTCH1-201ENST00000331920 SH2B2O14492 632 aaPredicted RBP17.04■□□□□ 0.32
PTCH1-201ENST00000331920 HSD3B2P26439 372 aa17.04■□□□□ 0.32
PTCH1-201ENST00000331920 ANXA11P50995 505 aaKnown RBP17.04■□□□□ 0.32
PTCH1-201ENST00000331920 KIAA0408Q6ZU52 694 aa17.04■□□□□ 0.32
PTCH1-201ENST00000331920 DSG4Q86SJ6 1040 aa17.04■□□□□ 0.32
PTCH1-201ENST00000331920 ENKURQ8TC29 256 aa17.04■□□□□ 0.32
PTCH1-201ENST00000331920 NMD3Q96D46 503 aaKnown RBP17.04■□□□□ 0.32
PTCH1-201ENST00000331920 TMEM106CQ9BVX2 250 aa17.04■□□□□ 0.32
PTCH1-201ENST00000331920 NOL6Q9H6R4 1146 aaKnown RBP17.04■□□□□ 0.32
PTCH1-201ENST00000331920 USP15Q9Y4E8 981 aaPredicted RBP17.04■□□□□ 0.32
PTCH1-201ENST00000331920 UTYO14607 1347 aa17.04■□□□□ 0.32
PTCH1-201ENST00000331920 UBE3CQ15386 1083 aa17.04■□□□□ 0.32
PTCH1-201ENST00000331920 SH3RF3Q8TEJ3 882 aaPredicted RBP17.04■□□□□ 0.32
PTCH1-201ENST00000331920 ELL3Q9HB65 397 aaPredicted RBP17.04■□□□□ 0.32
PTCH1-201ENST00000331920 GRID2IPA4D2P6 1211 aa17.03■□□□□ 0.32
PTCH1-201ENST00000331920 MGAT4DA6NG13 374 aa17.03■□□□□ 0.32
PTCH1-201ENST00000331920 SENP7Q9BQF6 1050 aa17.03■□□□□ 0.32
PTCH1-201ENST00000331920 LXNQ9BS40 222 aa17.03■□□□□ 0.32
PTCH1-201ENST00000331920 UBXN6Q9BZV1 441 aa17.03■□□□□ 0.32
PTCH1-201ENST00000331920 URB2Q14146 1524 aaKnown RBP17.03■□□□□ 0.32
PTCH1-201ENST00000331920 KIF28PB7ZC32 967 aa17.03■□□□□ 0.32
PTCH1-201ENST00000331920 TRAPPC3O43617 180 aa17.03■□□□□ 0.32
PTCH1-201ENST00000331920 UMPSP11172 480 aa17.03■□□□□ 0.32
PTCH1-201ENST00000331920 OR1G1P47890 313 aa17.03■□□□□ 0.32
PTCH1-201ENST00000331920 OLFML2AQ68BL7 652 aa17.03■□□□□ 0.32
PTCH1-201ENST00000331920 RBBP8NLQ8NC74 664 aaPredicted RBP17.03■□□□□ 0.32
PTCH1-201ENST00000331920 RAD54LQ92698 747 aa17.03■□□□□ 0.32
PTCH1-201ENST00000331920 C18orf8Q96DM3 657 aa17.03■□□□□ 0.32
PTCH1-201ENST00000331920 EXO5Q9H790 373 aa17.03■□□□□ 0.32
PTCH1-201ENST00000331920 AP4S1Q9Y587 144 aa17.03■□□□□ 0.32
PTCH1-201ENST00000331920 PCDHB7Q9Y5E2 793 aa17.03■□□□□ 0.32
PTCH1-201ENST00000331920 MYH10P35580 1976 aa17.03■□□□□ 0.32
PTCH1-201ENST00000331920 PSMD12O00232 456 aaPredicted RBP17.03■□□□□ 0.32
PTCH1-201ENST00000331920 TNPO2O14787 897 aaKnown RBP17.03■□□□□ 0.32
PTCH1-201ENST00000331920 CNOT3O75175 753 aaKnown RBP17.03■□□□□ 0.32
PTCH1-201ENST00000331920 PTPN1P18031 435 aaKnown RBP17.03■□□□□ 0.32
PTCH1-201ENST00000331920 ALOX12P18054 663 aa17.03■□□□□ 0.32
PTCH1-201ENST00000331920 WEE1P30291 646 aa17.03■□□□□ 0.32
PTCH1-201ENST00000331920 ADD2P35612 726 aa17.03■□□□□ 0.32
PTCH1-201ENST00000331920 CDC73Q6P1J9 531 aa17.03■□□□□ 0.32
PTCH1-201ENST00000331920 RNF44Q7L0R7 432 aa17.03■□□□□ 0.32
PTCH1-201ENST00000331920 MICALL2Q8IY33 904 aa17.03■□□□□ 0.32
PTCH1-201ENST00000331920 BLOC1S5Q8TDH9 187 aa17.03■□□□□ 0.32
PTCH1-201ENST00000331920 CARD14Q9BXL6 1004 aa17.03■□□□□ 0.32
PTCH1-201ENST00000331920 PUS7LQ9H0K6 701 aaKnown RBP17.03■□□□□ 0.32
PTCH1-201ENST00000331920 ENDOD1O94919 500 aa17.03■□□□□ 0.32
PTCH1-201ENST00000331920 POLBP06746 335 aa17.03■□□□□ 0.32
PTCH1-201ENST00000331920 EIF2S3P41091 472 aaKnown RBP17.03■□□□□ 0.32
PTCH1-201ENST00000331920 PEG10Q86TG7 708 aaKnown RBP17.03■□□□□ 0.32
PTCH1-201ENST00000331920 SPIRE2Q8WWL2 714 aa17.03■□□□□ 0.32
PTCH1-201ENST00000331920 ZNF560Q96MR9 790 aa17.03■□□□□ 0.32
PTCH1-201ENST00000331920 SSH2Q76I76 1423 aa17.03■□□□□ 0.32
PTCH1-201ENST00000331920 hCG_1984214I3L0E3 225 aa17.03■□□□□ 0.32
PTCH1-201ENST00000331920 POLRMTO00411 1230 aaKnown RBP17.03■□□□□ 0.32
PTCH1-201ENST00000331920 TCEA3O75764 348 aa17.03■□□□□ 0.32
PTCH1-201ENST00000331920 CYP2C19P33261 490 aa17.03■□□□□ 0.32
PTCH1-201ENST00000331920 EIF4A1P60842 406 aaKnown RBP17.03■□□□□ 0.32
PTCH1-201ENST00000331920 FCHO2Q0JRZ9 810 aa17.03■□□□□ 0.32
PTCH1-201ENST00000331920 TRIM72Q6ZMU5 477 aa17.03■□□□□ 0.32
PTCH1-201ENST00000331920 CYP4Z2PQ8N1L4 340 aa17.03■□□□□ 0.32
PTCH1-201ENST00000331920 ZNF713Q8N859 430 aaPredicted RBP17.03■□□□□ 0.32
PTCH1-201ENST00000331920 TMEM260Q9NX78 707 aa17.03■□□□□ 0.32
PTCH1-201ENST00000331920 TTLL13PA6NNM8 815 aa17.03■□□□□ 0.32
PTCH1-201ENST00000331920 ZNF839A8K0R7 811 aa17.03■□□□□ 0.32
PTCH1-201ENST00000331920 TAF4O00268 1085 aa17.03■□□□□ 0.32
PTCH1-201ENST00000331920 LGALS3BPQ08380 585 aa17.03■□□□□ 0.32
PTCH1-201ENST00000331920 CDH18Q13634 790 aa17.03■□□□□ 0.32
PTCH1-201ENST00000331920 DDR2Q16832 855 aa17.03■□□□□ 0.32
PTCH1-201ENST00000331920 C10orf120Q5SQS8 335 aa17.03■□□□□ 0.32
PTCH1-201ENST00000331920 RNF149Q8NC42 400 aa17.02■□□□□ 0.32
PTCH1-201ENST00000331920 PMM1Q92871 262 aa17.02■□□□□ 0.32
PTCH1-201ENST00000331920 MIEF2Q96C03 454 aa17.02■□□□□ 0.32
PTCH1-201ENST00000331920 NMRK1Q9NWW6 199 aa17.02■□□□□ 0.32
PTCH1-201ENST00000331920 FAM196BA6NMK8 535 aa17.02■□□□□ 0.32
PTCH1-201ENST00000331920 GGPS1O95749 300 aa17.02■□□□□ 0.32
PTCH1-201ENST00000331920 FGFR1P11362 822 aa17.02■□□□□ 0.32
PTCH1-201ENST00000331920 PSMB9P28065 219 aa17.02■□□□□ 0.32
PTCH1-201ENST00000331920 IL5RAQ01344 420 aa17.02■□□□□ 0.32
PTCH1-201ENST00000331920 OTUD5Q96G74 571 aa17.02■□□□□ 0.32
PTCH1-201ENST00000331920 RBM15Q96T37 977 aaKnown RBP eCLIP17.02■□□□□ 0.32
PTCH1-201ENST00000331920 ITSN2Q9NZM3 1697 aa17.02■□□□□ 0.32
PTCH1-201ENST00000331920 NR5A2O00482 541 aa17.02■□□□□ 0.32
PTCH1-201ENST00000331920 PRPF3O43395 683 aaKnown RBP17.02■□□□□ 0.32
PTCH1-201ENST00000331920 STIP1P31948 543 aaKnown RBP17.02■□□□□ 0.32
PTCH1-201ENST00000331920 UGT3A1Q6NUS8 523 aa17.02■□□□□ 0.32
PTCH1-201ENST00000331920 TMEM117Q9H0C3 514 aa17.02■□□□□ 0.32
PTCH1-201ENST00000331920 CYLDQ9NQC7 956 aa17.02■□□□□ 0.32
PTCH1-201ENST00000331920 STK39Q9UEW8 545 aa17.02■□□□□ 0.32
PTCH1-201ENST00000331920 SNX13Q9Y5W8 968 aa17.02■□□□□ 0.32
PTCH1-201ENST00000331920 FAM20BO75063 409 aa17.02■□□□□ 0.32
PTCH1-201ENST00000331920 FGFR2P21802 821 aa17.02■□□□□ 0.32
PTCH1-201ENST00000331920 HNMTP50135 292 aa17.02■□□□□ 0.32
PTCH1-201ENST00000331920 DHX34Q14147 1143 aaKnown RBP17.02■□□□□ 0.32
PTCH1-201ENST00000331920 WDR72Q3MJ13 1102 aa17.02■□□□□ 0.32
PTCH1-201ENST00000331920 ZBTB10Q96DT7 871 aa17.02■□□□□ 0.32
PTCH1-201ENST00000331920 MIEF1Q9NQG6 463 aa17.02■□□□□ 0.32
PTCH1-201ENST00000331920 ANAPC2Q9UJX6 822 aa17.02■□□□□ 0.32
PTCH1-201ENST00000331920 SNX9Q9Y5X1 595 aa17.02■□□□□ 0.32
PTCH1-201ENST00000331920 STAU1O95793 577 aaKnown RBP17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms