RNA–Protein interactions for RNA: ENST00000308249.3

PPM1E-201, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPM1E, Length 6,542 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1E-201ENST00000308249 PCDHGA3Q9Y5H0 932 aa16.44■□□□□ 0.22
PPM1E-201ENST00000308249 PTK6Q13882 451 aa16.44■□□□□ 0.22
PPM1E-201ENST00000308249 RCN1Q15293 331 aa16.44■□□□□ 0.22
PPM1E-201ENST00000308249 SPIRE2Q8WWL2 714 aa16.44■□□□□ 0.22
PPM1E-201ENST00000308249 NFKBIZQ9BYH8 718 aa16.44■□□□□ 0.22
PPM1E-201ENST00000308249 OSGEPL1Q9H4B0 414 aa16.44■□□□□ 0.22
PPM1E-201ENST00000308249 NAGPAQ9UK23 515 aa16.44■□□□□ 0.22
PPM1E-201ENST00000308249 GSSP48637 474 aa16.44■□□□□ 0.22
PPM1E-201ENST00000308249 TRIQKQ629K1 86 aa16.44■□□□□ 0.22
PPM1E-201ENST00000308249 GNG14A0A1W2PPG7 69 aa16.43■□□□□ 0.22
PPM1E-201ENST00000308249 TTLL13PA6NNM8 815 aa16.43■□□□□ 0.22
PPM1E-201ENST00000308249 KIF1CO43896 1103 aaKnown RBP16.43■□□□□ 0.22
PPM1E-201ENST00000308249 PMPCBO75439 489 aa16.43■□□□□ 0.22
PPM1E-201ENST00000308249 SUPT7LO94864 414 aa16.43■□□□□ 0.22
PPM1E-201ENST00000308249 TMEM132DQ14C87 1099 aa16.43■□□□□ 0.22
PPM1E-201ENST00000308249 GATAD2AQ86YP4 633 aa16.43■□□□□ 0.22
PPM1E-201ENST00000308249 OXER1Q8TDS5 423 aa16.43■□□□□ 0.22
PPM1E-201ENST00000308249 CCDC3Q9BQI4 270 aa16.43■□□□□ 0.22
PPM1E-201ENST00000308249 PHACTR1Q9C0D0 580 aa16.43■□□□□ 0.22
PPM1E-201ENST00000308249 LRRC14BA6NHZ5 514 aa16.43■□□□□ 0.22
PPM1E-201ENST00000308249 AGTP01019 485 aa16.43■□□□□ 0.22
PPM1E-201ENST00000308249 NMT1P30419 496 aaKnown RBP16.43■□□□□ 0.22
PPM1E-201ENST00000308249 EDRF1Q3B7T1 1238 aa16.43■□□□□ 0.22
PPM1E-201ENST00000308249 HAUS6Q7Z4H7 955 aa16.43■□□□□ 0.22
PPM1E-201ENST00000308249 LEMD2Q8NC56 503 aa16.43■□□□□ 0.22
PPM1E-201ENST00000308249 SCUBE2Q9NQ36 999 aa16.43■□□□□ 0.22
PPM1E-201ENST00000308249 STX7O15400 261 aaKnown RBP16.43■□□□□ 0.22
PPM1E-201ENST00000308249 ALDH9A1P49189 494 aa16.43■□□□□ 0.22
PPM1E-201ENST00000308249 ARMC4Q5T2S8 1044 aa16.43■□□□□ 0.22
PPM1E-201ENST00000308249 MDM1Q8TC05 714 aa16.43■□□□□ 0.22
PPM1E-201ENST00000308249 ZNF669Q96BR6 464 aaPredicted RBP16.43■□□□□ 0.22
PPM1E-201ENST00000308249 ERAP1Q9NZ08 941 aa16.43■□□□□ 0.22
PPM1E-201ENST00000308249 SIK3Q9Y2K2 1263 aa16.43■□□□□ 0.22
PPM1E-201ENST00000308249 CNOT3O75175 753 aaKnown RBP16.43■□□□□ 0.22
PPM1E-201ENST00000308249 CACTIN-AS1Q8N1I8 211 aa16.43■□□□□ 0.22
PPM1E-201ENST00000308249 SLC35G2Q8TBE7 412 aa16.43■□□□□ 0.22
PPM1E-201ENST00000308249 UTP15Q8TED0 518 aaKnown RBP16.43■□□□□ 0.22
PPM1E-201ENST00000308249 COA1Q9GZY4 146 aa16.43■□□□□ 0.22
PPM1E-201ENST00000308249 MTO1Q9Y2Z2 717 aaKnown RBP16.43■□□□□ 0.22
PPM1E-201ENST00000308249 SLC1A1P43005 524 aa16.43■□□□□ 0.22
PPM1E-201ENST00000308249 PUDPQ08623 228 aa16.43■□□□□ 0.22
PPM1E-201ENST00000308249 TRAF2Q12933 501 aa16.43■□□□□ 0.22
PPM1E-201ENST00000308249 TMEM47Q9BQJ4 181 aa16.43■□□□□ 0.22
PPM1E-201ENST00000308249 ACAD9Q9H845 621 aa16.43■□□□□ 0.22
PPM1E-201ENST00000308249 MANSC1Q9H8J5 431 aa16.43■□□□□ 0.22
PPM1E-201ENST00000308249 TRIM39Q9HCM9 518 aa16.43■□□□□ 0.22
PPM1E-201ENST00000308249 SNX13Q9Y5W8 968 aa16.43■□□□□ 0.22
PPM1E-201ENST00000308249 KIF24Q5T7B8 1368 aa16.43■□□□□ 0.22
PPM1E-201ENST00000308249 ZNF862O60290 1169 aa16.42■□□□□ 0.22
PPM1E-201ENST00000308249 MMRN1Q13201 1228 aa16.42■□□□□ 0.22
PPM1E-201ENST00000308249 ARHGAP15Q53QZ3 475 aa16.42■□□□□ 0.22
PPM1E-201ENST00000308249 PDZK1Q5T2W1 519 aa16.42■□□□□ 0.22
PPM1E-201ENST00000308249 C12orf60Q5U649 245 aa16.42■□□□□ 0.22
PPM1E-201ENST00000308249 STX12Q86Y82 276 aa16.42■□□□□ 0.22
PPM1E-201ENST00000308249 UBXN6Q9BZV1 441 aa16.42■□□□□ 0.22
PPM1E-201ENST00000308249 RMND5AQ9H871 391 aa16.42■□□□□ 0.22
PPM1E-201ENST00000308249 TTC26A0AVF1 554 aa16.42■□□□□ 0.22
PPM1E-201ENST00000308249 LRG1P02750 347 aa16.42■□□□□ 0.22
PPM1E-201ENST00000308249 ABCB1P08183 1280 aaPredicted RBP16.42■□□□□ 0.22
PPM1E-201ENST00000308249 C6orf222P0C671 652 aaPredicted RBP16.42■□□□□ 0.22
PPM1E-201ENST00000308249 RHAGQ02094 409 aa16.42■□□□□ 0.22
PPM1E-201ENST00000308249 E2F7Q96AV8 911 aa16.42■□□□□ 0.22
PPM1E-201ENST00000308249 FAM20AQ96MK3 541 aa16.42■□□□□ 0.22
PPM1E-201ENST00000308249 CAMKK2Q96RR4 588 aa16.42■□□□□ 0.22
PPM1E-201ENST00000308249 S100A13Q99584 98 aa16.42■□□□□ 0.22
PPM1E-201ENST00000308249 NMRK1Q9NWW6 199 aa16.42■□□□□ 0.22
PPM1E-201ENST00000308249 YWHABP31946 246 aaKnown RBP16.42■□□□□ 0.22
PPM1E-201ENST00000308249 RBP5P82980 135 aa16.42■□□□□ 0.22
PPM1E-201ENST00000308249 SEC16BQ96JE7 1060 aa16.42■□□□□ 0.22
PPM1E-201ENST00000308249 MGAT4DA6NG13 374 aa16.42■□□□□ 0.22
PPM1E-201ENST00000308249 CENPXA8MT69 81 aa16.42■□□□□ 0.22
PPM1E-201ENST00000308249 CHURC1-FNTBB4DL54 471 aa16.42■□□□□ 0.22
PPM1E-201ENST00000308249 DYNC1LI2O43237 492 aaPredicted RBP16.42■□□□□ 0.22
PPM1E-201ENST00000308249 TEX33O43247 280 aa16.42■□□□□ 0.22
PPM1E-201ENST00000308249 SERPINH1P50454 418 aaKnown RBP16.42■□□□□ 0.22
PPM1E-201ENST00000308249 CHRNB3Q05901 458 aa16.42■□□□□ 0.22
PPM1E-201ENST00000308249 KRR1Q13601 381 aaKnown RBP16.42■□□□□ 0.22
PPM1E-201ENST00000308249 TAF5Q15542 800 aa16.42■□□□□ 0.22
PPM1E-201ENST00000308249 TAF13Q15543 124 aa16.42■□□□□ 0.22
PPM1E-201ENST00000308249 NECAB2Q7Z6G3 386 aa16.42■□□□□ 0.22
PPM1E-201ENST00000308249 ATG16L2Q8NAA4 619 aa16.42■□□□□ 0.22
PPM1E-201ENST00000308249 POLR1BQ9H9Y6 1135 aa16.42■□□□□ 0.22
PPM1E-201ENST00000308249 RNF181Q9P0P0 153 aa16.42■□□□□ 0.22
PPM1E-201ENST00000308249 PIM2Q9P1W9 311 aa16.42■□□□□ 0.22
PPM1E-201ENST00000308249 CDY2AQ9Y6F7 541 aa16.42■□□□□ 0.22
PPM1E-201ENST00000308249 CDY1Q9Y6F8 540 aa16.42■□□□□ 0.22
PPM1E-201ENST00000308249 PIK3C2GO75747 1445 aa16.42■□□□□ 0.22
PPM1E-201ENST00000308249 SPTLC1O15269 473 aa16.42■□□□□ 0.22
PPM1E-201ENST00000308249 NCAM1P13591 858 aa16.42■□□□□ 0.22
PPM1E-201ENST00000308249 AP3M2P53677 418 aa16.42■□□□□ 0.22
PPM1E-201ENST00000308249 TAF8Q7Z7C8 310 aa16.42■□□□□ 0.22
PPM1E-201ENST00000308249 SLC44A5Q8NCS7 719 aa16.42■□□□□ 0.22
PPM1E-201ENST00000308249 ZNF624Q9P2J8 865 aaPredicted RBP16.42■□□□□ 0.22
PPM1E-201ENST00000308249 TMA7Q9Y2S6 64 aaKnown RBP16.42■□□□□ 0.22
PPM1E-201ENST00000308249 FAM135BQ49AJ0 1406 aa16.42■□□□□ 0.22
PPM1E-201ENST00000308249 CYP2C19P33261 490 aa16.41■□□□□ 0.22
PPM1E-201ENST00000308249 IRX1P78414 480 aaPredicted RBP16.41■□□□□ 0.22
PPM1E-201ENST00000308249 GRAPQ13588 217 aa16.41■□□□□ 0.22
PPM1E-201ENST00000308249 LPIN1Q14693 890 aa16.41■□□□□ 0.22
PPM1E-201ENST00000308249 MAPK11Q15759 364 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms