RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 RASSF3Q86WH2 238 aa17.05■□□□□ 0.32
CCDC8-201ENST00000307522 MAML1Q92585 1016 aa17.05■□□□□ 0.32
CCDC8-201ENST00000307522 GRAMD1AQ96CP6 724 aa17.05■□□□□ 0.32
CCDC8-201ENST00000307522 FHDC1Q9C0D6 1143 aaPredicted RBP17.05■□□□□ 0.32
CCDC8-201ENST00000307522 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.05■□□□□ 0.32
CCDC8-201ENST00000307522 ANPEPP15144 967 aa17.04■□□□□ 0.32
CCDC8-201ENST00000307522 KRT4P19013 534 aa17.04■□□□□ 0.32
CCDC8-201ENST00000307522 PTGER2P43116 358 aa17.04■□□□□ 0.32
CCDC8-201ENST00000307522 NR1H3Q13133 447 aa17.04■□□□□ 0.32
CCDC8-201ENST00000307522 TNFAIP1Q13829 316 aa17.04■□□□□ 0.32
CCDC8-201ENST00000307522 RIPOR1Q6ZS17 1223 aa17.04■□□□□ 0.32
CCDC8-201ENST00000307522 CYFIP1Q7L576 1253 aa17.04■□□□□ 0.32
CCDC8-201ENST00000307522 MAP7D3Q8IWC1 876 aa17.04■□□□□ 0.32
CCDC8-201ENST00000307522 SLC16A10Q8TF71 515 aa17.04■□□□□ 0.32
CCDC8-201ENST00000307522 CCDC127Q96BQ5 260 aa17.04■□□□□ 0.32
CCDC8-201ENST00000307522 OTUD5Q96G74 571 aa17.04■□□□□ 0.32
CCDC8-201ENST00000307522 FAM20AQ96MK3 541 aa17.04■□□□□ 0.32
CCDC8-201ENST00000307522 TEKT3Q9BXF9 490 aa17.04■□□□□ 0.32
CCDC8-201ENST00000307522 MAK16Q9BXY0 300 aaKnown RBP17.04■□□□□ 0.32
CCDC8-201ENST00000307522 FAM192AQ9GZU8 254 aa17.04■□□□□ 0.32
CCDC8-201ENST00000307522 SLC17A7Q9P2U7 560 aa17.04■□□□□ 0.32
CCDC8-201ENST00000307522 STX18Q9P2W9 335 aaKnown RBP17.04■□□□□ 0.32
CCDC8-201ENST00000307522 SLC16A4O15374 487 aa17.04■□□□□ 0.32
CCDC8-201ENST00000307522 ETS1P14921 441 aa17.04■□□□□ 0.32
CCDC8-201ENST00000307522 PTPRAP18433 802 aa17.04■□□□□ 0.32
CCDC8-201ENST00000307522 LMNB1P20700 586 aa17.04■□□□□ 0.32
CCDC8-201ENST00000307522 IGBP1P78318 339 aa17.04■□□□□ 0.32
CCDC8-201ENST00000307522 DLG1Q12959 904 aa17.04■□□□□ 0.32
CCDC8-201ENST00000307522 CBX3Q13185 183 aa17.04■□□□□ 0.32
CCDC8-201ENST00000307522 NCOA4Q13772 614 aa17.04■□□□□ 0.32
CCDC8-201ENST00000307522 SIX1Q15475 284 aaPredicted RBP17.04■□□□□ 0.32
CCDC8-201ENST00000307522 KNOP1Q1ED39 458 aaKnown RBP17.04■□□□□ 0.32
CCDC8-201ENST00000307522 TKFCQ3LXA3 575 aa17.04■□□□□ 0.32
CCDC8-201ENST00000307522 EPC2Q52LR7 807 aa17.04■□□□□ 0.32
CCDC8-201ENST00000307522 GLIS1Q8NBF1 620 aa17.04■□□□□ 0.32
CCDC8-201ENST00000307522 RNF181Q9P0P0 153 aa17.04■□□□□ 0.32
CCDC8-201ENST00000307522 FOCADQ5VW36 1801 aa17.04■□□□□ 0.32
CCDC8-201ENST00000307522 K7ENM7 598 aa17.04■□□□□ 0.32
CCDC8-201ENST00000307522 NPM3O75607 178 aaKnown RBP17.04■□□□□ 0.32
CCDC8-201ENST00000307522 SSTR3P32745 418 aaPredicted RBP17.04■□□□□ 0.32
CCDC8-201ENST00000307522 PEX3P56589 373 aa17.04■□□□□ 0.32
CCDC8-201ENST00000307522 TREML2Q5T2D2 321 aa17.04■□□□□ 0.32
CCDC8-201ENST00000307522 PADI6Q6TGC4 694 aa17.04■□□□□ 0.32
CCDC8-201ENST00000307522 RBM44Q6ZP01 1051 aaKnown RBP17.04■□□□□ 0.32
CCDC8-201ENST00000307522 RBM15Q96T37 977 aaKnown RBP eCLIP17.04■□□□□ 0.323e-6■■■□□ 15.4
CCDC8-201ENST00000307522 MXRA8Q9BRK3 442 aa17.04■□□□□ 0.32
CCDC8-201ENST00000307522 ZNF395Q9H8N7 513 aaPredicted RBP17.04■□□□□ 0.32
CCDC8-201ENST00000307522 COG7P83436 770 aa17.03■□□□□ 0.32
CCDC8-201ENST00000307522 SYCP2LQ5T4T6 812 aa17.03■□□□□ 0.32
CCDC8-201ENST00000307522 DNAJC14Q6Y2X3 702 aaPredicted RBP17.03■□□□□ 0.32
CCDC8-201ENST00000307522 GADL1Q6ZQY3 521 aa17.03■□□□□ 0.32
CCDC8-201ENST00000307522 GSTA5Q7RTV2 222 aa17.03■□□□□ 0.32
CCDC8-201ENST00000307522 ST13P4Q8IZP2 240 aaPredicted RBP17.03■□□□□ 0.32
CCDC8-201ENST00000307522 GLT8D2Q9H1C3 349 aa17.03■□□□□ 0.32
CCDC8-201ENST00000307522 NDE1Q9NXR1 346 aa17.03■□□□□ 0.32
CCDC8-201ENST00000307522 ADGRA3Q8IWK6 1321 aa17.03■□□□□ 0.32
CCDC8-201ENST00000307522 VWA5AO00534 786 aa17.03■□□□□ 0.32
CCDC8-201ENST00000307522 KCTD21Q4G0X4 260 aa17.03■□□□□ 0.32
CCDC8-201ENST00000307522 SFT2D3Q587I9 215 aa17.03■□□□□ 0.32
CCDC8-201ENST00000307522 XKR9Q5GH70 373 aa17.03■□□□□ 0.32
CCDC8-201ENST00000307522 MFSD4BQ5TF39 518 aa17.03■□□□□ 0.32
CCDC8-201ENST00000307522 C1orf146Q5VVC0 180 aa17.03■□□□□ 0.32
CCDC8-201ENST00000307522 FYB2Q5VWT5 728 aa17.03■□□□□ 0.32
CCDC8-201ENST00000307522 LMBRD2Q68DH5 695 aaPredicted RBP17.03■□□□□ 0.32
CCDC8-201ENST00000307522 SDCCAG8Q86SQ7 713 aaPredicted RBP17.03■□□□□ 0.32
CCDC8-201ENST00000307522 TRABD2AQ86V40 505 aa17.03■□□□□ 0.32
CCDC8-201ENST00000307522 NSL1Q96IY1 281 aa17.03■□□□□ 0.32
CCDC8-201ENST00000307522 ELP3Q9H9T3 547 aa17.03■□□□□ 0.32
CCDC8-201ENST00000307522 PACSIN3Q9UKS6 424 aa17.03■□□□□ 0.32
CCDC8-201ENST00000307522 MKI67P46013 3256 aaKnown RBP17.03■□□□□ 0.32
CCDC8-201ENST00000307522 QSER1Q2KHR3 1735 aa17.03■□□□□ 0.32
CCDC8-201ENST00000307522 MROH7Q68CQ1 1323 aa17.02■□□□□ 0.32
CCDC8-201ENST00000307522 FAM237BA0A1B0GVD1 139 aa17.02■□□□□ 0.32
CCDC8-201ENST00000307522 DLG4P78352 724 aa17.02■□□□□ 0.32
CCDC8-201ENST00000307522 RGS9BPQ6ZS82 235 aa17.02■□□□□ 0.32
CCDC8-201ENST00000307522 ZNF280CQ8ND82 737 aa17.02■□□□□ 0.32
CCDC8-201ENST00000307522 HAUS1Q96CS2 278 aa17.02■□□□□ 0.32
CCDC8-201ENST00000307522 SNF8Q96H20 258 aa17.02■□□□□ 0.32
CCDC8-201ENST00000307522 ZBED3Q96IU2 234 aaPredicted RBP17.02■□□□□ 0.32
CCDC8-201ENST00000307522 NMUR2Q9GZQ4 415 aa17.02■□□□□ 0.32
CCDC8-201ENST00000307522 LIN28AQ9H9Z2 209 aaKnown RBP17.02■□□□□ 0.32
CCDC8-201ENST00000307522 TMCO1Q9UM00 188 aa17.02■□□□□ 0.32
CCDC8-201ENST00000307522 NCANO14594 1321 aa17.02■□□□□ 0.32
CCDC8-201ENST00000307522 DNAJC6O75061 913 aa17.02■□□□□ 0.32
CCDC8-201ENST00000307522 CCNE2O96020 404 aa17.02■□□□□ 0.32
CCDC8-201ENST00000307522 CYP3A4P08684 503 aa17.02■□□□□ 0.32
CCDC8-201ENST00000307522 EIF4BP23588 611 aaKnown RBP17.02■□□□□ 0.32
CCDC8-201ENST00000307522 AQP4P55087 323 aa17.02■□□□□ 0.32
CCDC8-201ENST00000307522 BACE1P56817 501 aa17.02■□□□□ 0.32
CCDC8-201ENST00000307522 MAP7Q14244 749 aa17.02■□□□□ 0.32
CCDC8-201ENST00000307522 TMEM132BQ14DG7 1078 aa17.02■□□□□ 0.32
CCDC8-201ENST00000307522 CMPK2Q5EBM0 449 aa17.02■□□□□ 0.32
CCDC8-201ENST00000307522 ZFYVE27Q5T4F4 411 aa17.02■□□□□ 0.32
CCDC8-201ENST00000307522 IZUMO3Q5VZ72 239 aa17.02■□□□□ 0.32
CCDC8-201ENST00000307522 FAM160B2Q86V87 743 aa17.02■□□□□ 0.32
CCDC8-201ENST00000307522 APLFQ8IW19 511 aaPredicted RBP17.02■□□□□ 0.32
CCDC8-201ENST00000307522 GSTCDQ8NEC7 633 aa17.02■□□□□ 0.32
CCDC8-201ENST00000307522 PANX3Q96QZ0 392 aa17.02■□□□□ 0.32
CCDC8-201ENST00000307522 PPP1R16BQ96T49 567 aa17.02■□□□□ 0.32
CCDC8-201ENST00000307522 NUP85Q9BW27 656 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms