RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 KRCC1Q9NPI7 259 aaPredicted RBP13.79□□□□□ -0.2
COL1A1-201ENST00000225964 ADGRG1Q9Y653 693 aa13.79□□□□□ -0.2
COL1A1-201ENST00000225964 PMPCBO75439 489 aa13.79□□□□□ -0.2
COL1A1-201ENST00000225964 WEE1P30291 646 aa13.79□□□□□ -0.2
COL1A1-201ENST00000225964 CAMK2GQ13555 558 aaPredicted RBP13.79□□□□□ -0.2
COL1A1-201ENST00000225964 TRIM65Q6PJ69 517 aa13.79□□□□□ -0.2
COL1A1-201ENST00000225964 SPATA21Q7Z572 469 aa13.79□□□□□ -0.2
COL1A1-201ENST00000225964 PCYOX1LQ8NBM8 494 aa13.79□□□□□ -0.2
COL1A1-201ENST00000225964 MRPS31Q92665 395 aaKnown RBP13.79□□□□□ -0.2
COL1A1-201ENST00000225964 RPRD1AQ96P16 312 aaPredicted RBP13.79□□□□□ -0.2
COL1A1-201ENST00000225964 YIPF3Q9GZM5 350 aa13.79□□□□□ -0.2
COL1A1-201ENST00000225964 DMAP1Q9NPF5 467 aaPredicted RBP13.79□□□□□ -0.2
COL1A1-201ENST00000225964 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.79□□□□□ -0.2
COL1A1-201ENST00000225964 F8W810 466 aa13.78□□□□□ -0.2
COL1A1-201ENST00000225964 DYRK3O43781 588 aa13.78□□□□□ -0.2
COL1A1-201ENST00000225964 AP1G2O75843 785 aa13.78□□□□□ -0.2
COL1A1-201ENST00000225964 ENDOD1O94919 500 aa13.78□□□□□ -0.2
COL1A1-201ENST00000225964 FUT11Q495W5 492 aa13.78□□□□□ -0.2
COL1A1-201ENST00000225964 LVRNQ6Q4G3 990 aa13.78□□□□□ -0.2
COL1A1-201ENST00000225964 LONP2Q86WA8 852 aa13.78□□□□□ -0.2
COL1A1-201ENST00000225964 PHACTR4Q8IZ21 702 aa13.78□□□□□ -0.2
COL1A1-201ENST00000225964 C7orf25Q9BPX7 421 aa13.78□□□□□ -0.2
COL1A1-201ENST00000225964 GOLPH3Q9H4A6 298 aa13.78□□□□□ -0.2
COL1A1-201ENST00000225964 STX7O15400 261 aaKnown RBP13.78□□□□□ -0.2
COL1A1-201ENST00000225964 URODP06132 367 aa13.78□□□□□ -0.2
COL1A1-201ENST00000225964 PCNAP12004 261 aa13.78□□□□□ -0.2
COL1A1-201ENST00000225964 PLEKHH3Q7Z736 793 aa13.78□□□□□ -0.2
COL1A1-201ENST00000225964 KCTD17Q8N5Z5 321 aa13.78□□□□□ -0.2
COL1A1-201ENST00000225964 RPS6KB2Q9UBS0 482 aa13.78□□□□□ -0.2
COL1A1-201ENST00000225964 MAGI3Q5TCQ9 1506 aa13.78□□□□□ -0.2
COL1A1-201ENST00000225964 CDC42BPBQ9Y5S2 1711 aa13.78□□□□□ -0.2
COL1A1-201ENST00000225964 EVPLLA8MZ36 301 aa13.78□□□□□ -0.2
COL1A1-201ENST00000225964 LRRC36Q1X8D7 754 aa13.78□□□□□ -0.2
COL1A1-201ENST00000225964 SEZ6Q53EL9 994 aa13.78□□□□□ -0.2
COL1A1-201ENST00000225964 TADA1Q96BN2 335 aa13.78□□□□□ -0.2
COL1A1-201ENST00000225964 VPS50Q96JG6 964 aa13.78□□□□□ -0.2
COL1A1-201ENST00000225964 PITPNM2Q9BZ72 1349 aa13.78□□□□□ -0.2
COL1A1-201ENST00000225964 VTNP04004 478 aa13.78□□□□□ -0.2
COL1A1-201ENST00000225964 RPS12P25398 132 aaKnown RBP13.78□□□□□ -0.2
COL1A1-201ENST00000225964 MTM1Q13496 603 aa13.78□□□□□ -0.2
COL1A1-201ENST00000225964 VPS72Q15906 364 aa13.78□□□□□ -0.2
COL1A1-201ENST00000225964 FAM71DQ8N9W8 422 aa13.78□□□□□ -0.2
COL1A1-201ENST00000225964 PPP1R14AQ96A00 147 aa13.78□□□□□ -0.2
COL1A1-201ENST00000225964 OPTNQ96CV9 577 aa13.78□□□□□ -0.2
COL1A1-201ENST00000225964 RSAD1Q9HA92 442 aa13.78□□□□□ -0.2
COL1A1-201ENST00000225964 GID8Q9NWU2 228 aa13.78□□□□□ -0.2
COL1A1-201ENST00000225964 PCYT1AP49585 367 aa13.78□□□□□ -0.2
COL1A1-201ENST00000225964 RABGAP1LQ5R372 815 aa13.78□□□□□ -0.2
COL1A1-201ENST00000225964 LAYNQ6UX15 382 aa13.78□□□□□ -0.2
COL1A1-201ENST00000225964 C3orf62Q6ZUJ4 267 aa13.78□□□□□ -0.2
COL1A1-201ENST00000225964 SGMS1Q86VZ5 419 aa13.78□□□□□ -0.2
COL1A1-201ENST00000225964 VPS37AQ8NEZ2 397 aa13.78□□□□□ -0.2
COL1A1-201ENST00000225964 FAM205CA6NFA0 338 aa13.77□□□□□ -0.2
COL1A1-201ENST00000225964 MYMKA6NI61 221 aa13.77□□□□□ -0.2
COL1A1-201ENST00000225964 TBX3O15119 743 aa13.77□□□□□ -0.2
COL1A1-201ENST00000225964 EIF3DO15371 548 aaKnown RBP eCLIP13.77□□□□□ -0.2
COL1A1-201ENST00000225964 DNAJB2P25686 324 aa13.77□□□□□ -0.2
COL1A1-201ENST00000225964 DENND5BQ6ZUT9 1274 aa13.77□□□□□ -0.2
COL1A1-201ENST00000225964 TRIM9Q9C026 710 aa13.77□□□□□ -0.2
COL1A1-201ENST00000225964 NIF3L1Q9GZT8 377 aa13.77□□□□□ -0.2
COL1A1-201ENST00000225964 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.77□□□□□ -0.2
COL1A1-201ENST00000225964 PTGER2P43116 358 aa13.77□□□□□ -0.2
COL1A1-201ENST00000225964 BFSP2Q13515 415 aa13.77□□□□□ -0.2
COL1A1-201ENST00000225964 TTLL9Q3SXZ7 439 aa13.77□□□□□ -0.2
COL1A1-201ENST00000225964 NAPEPLDQ6IQ20 393 aa13.77□□□□□ -0.2
COL1A1-201ENST00000225964 EPC1Q9H2F5 836 aa13.77□□□□□ -0.2
COL1A1-201ENST00000225964 SMG5Q9UPR3 1016 aaKnown RBP13.77□□□□□ -0.2
COL1A1-201ENST00000225964 ABCC3O15438 1527 aa13.77□□□□□ -0.2
COL1A1-201ENST00000225964 hCG_2014768A0A024R1R8 64 aa13.77□□□□□ -0.21
COL1A1-201ENST00000225964 EPHB2P29323 1055 aa13.77□□□□□ -0.21
COL1A1-201ENST00000225964 S100A5P33763 92 aa13.77□□□□□ -0.21
COL1A1-201ENST00000225964 CLEC16AQ2KHT3 1053 aa13.77□□□□□ -0.21
COL1A1-201ENST00000225964 EPC2Q52LR7 807 aa13.77□□□□□ -0.21
COL1A1-201ENST00000225964 LINC00523Q86TU6 105 aa13.77□□□□□ -0.21
COL1A1-201ENST00000225964 PARP9Q8IXQ6 854 aa13.77□□□□□ -0.21
COL1A1-201ENST00000225964 DTX3LQ8TDB6 740 aa13.77□□□□□ -0.21
COL1A1-201ENST00000225964 LRRC1Q9BTT6 524 aa13.77□□□□□ -0.21
COL1A1-201ENST00000225964 SOAT2O75908 522 aa13.77□□□□□ -0.21
COL1A1-201ENST00000225964 UCHL3P15374 230 aa13.77□□□□□ -0.21
COL1A1-201ENST00000225964 ITIH2P19823 946 aa13.77□□□□□ -0.21
COL1A1-201ENST00000225964 GUCA1AP43080 201 aaPredicted RBP13.77□□□□□ -0.21
COL1A1-201ENST00000225964 DDX39BQ13838 428 aaKnown RBP13.77□□□□□ -0.21
COL1A1-201ENST00000225964 SLC18A3Q16572 532 aa13.77□□□□□ -0.21
COL1A1-201ENST00000225964 OLFM3Q96PB7 478 aa13.77□□□□□ -0.21
COL1A1-201ENST00000225964 KCNH7Q9NS40 1196 aa13.77□□□□□ -0.21
COL1A1-201ENST00000225964 SLC26A4O43511 780 aa13.77□□□□□ -0.21
COL1A1-201ENST00000225964 DAB1O75553 588 aa13.77□□□□□ -0.21
COL1A1-201ENST00000225964 RASSF9O75901 435 aa13.77□□□□□ -0.21
COL1A1-201ENST00000225964 CHN1P15882 459 aa13.77□□□□□ -0.21
COL1A1-201ENST00000225964 EPHB3P54753 998 aa13.77□□□□□ -0.21
COL1A1-201ENST00000225964 NPEPPSP55786 919 aa13.77□□□□□ -0.21
COL1A1-201ENST00000225964 SEMA3FQ13275 785 aa13.77□□□□□ -0.21
COL1A1-201ENST00000225964 DDIT4Q9NX09 232 aa13.77□□□□□ -0.21
COL1A1-201ENST00000225964 FOXP2O15409 715 aa13.76□□□□□ -0.21
COL1A1-201ENST00000225964 MYL4P12829 197 aa13.76□□□□□ -0.21
COL1A1-201ENST00000225964 EZH2Q15910 746 aaKnown RBP13.76□□□□□ -0.21
COL1A1-201ENST00000225964 PGS1Q32NB8 556 aa13.76□□□□□ -0.21
COL1A1-201ENST00000225964 PRUNE1Q86TP1 453 aa13.76□□□□□ -0.21
COL1A1-201ENST00000225964 HERC6Q8IVU3 1022 aa13.76□□□□□ -0.21
COL1A1-201ENST00000225964 SLC44A2Q8IWA5 706 aaPredicted RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms