RNA–Protein interactions for RNA: YMR153W

NUP53, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeast

Gene NUP53, Length 1,428 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP53	YMR153W	MLF3	P32047	452 aa		5.77	□□□□□ -1.49
NUP53	YMR153W	SFT2	P38166	215 aa		5.77	□□□□□ -1.49
NUP53	YMR153W	BOL3	P39724	118 aa		5.77	□□□□□ -1.49
NUP53	YMR153W	GLE2	P40066	365 aa		5.77	□□□□□ -1.49
NUP53	YMR153W	RPA14	P50106	137 aa		5.77	□□□□□ -1.49
NUP53	YMR153W	YIP3	P53633	176 aa		5.77	□□□□□ -1.49
NUP53	YMR153W	COX12	Q01519	83 aa		5.77	□□□□□ -1.49
NUP53	YMR153W	YLR179C	Q06252	201 aa	Known RBP	5.77	□□□□□ -1.49
NUP53	YMR153W	AYT1	Q12226	474 aa		5.77	□□□□□ -1.49
NUP53	YMR153W	PRM7	Q12459	698 aa		5.77	□□□□□ -1.49
NUP53	YMR153W	ERS1	P17261	260 aa		5.76	□□□□□ -1.49
NUP53	YMR153W	MAG1	P22134	296 aa	Known RBP	5.76	□□□□□ -1.49
NUP53	YMR153W	IMP2	P46972	177 aa		5.76	□□□□□ -1.49
NUP53	YMR153W	YGR025W	P53216	100 aa		5.76	□□□□□ -1.49
NUP53	YMR153W	TY1A-H	P0C2I4	478 aa	Known RBP	5.75	□□□□□ -1.49
NUP53	YMR153W	TIR2	P33890	251 aa		5.75	□□□□□ -1.49
NUP53	YMR153W	PET100	P38958	111 aa		5.75	□□□□□ -1.49
NUP53	YMR153W	YEA4	P40004	342 aa		5.75	□□□□□ -1.49
NUP53	YMR153W	YIL077C	P40508	320 aa		5.75	□□□□□ -1.49
NUP53	YMR153W	LCB3	P47013	409 aa		5.75	□□□□□ -1.49
NUP53	YMR153W	YGL117W	P53133	265 aa		5.75	□□□□□ -1.49
NUP53	YMR153W	ORM1	P53224	222 aa		5.75	□□□□□ -1.49
NUP53	YMR153W	YNR071C	P53757	342 aa		5.75	□□□□□ -1.49
NUP53	YMR153W	YMR007W	Q03675	126 aa		5.75	□□□□□ -1.49
NUP53	YMR153W	RDS3	Q06835	107 aa	Predicted RBP	5.75	□□□□□ -1.49
NUP53	YMR153W	YDL242W	Q07746	117 aa		5.75	□□□□□ -1.49
NUP53	YMR153W	YDR215C	Q12240	137 aa		5.75	□□□□□ -1.49
NUP53	YMR153W	ZRC1	P20107	442 aa		5.74	□□□□□ -1.49
NUP53	YMR153W	LSM2	P38203	95 aa	Known RBP	5.74	□□□□□ -1.49
NUP53	YMR153W	DER1	P38307	211 aa		5.74	□□□□□ -1.49
NUP53	YMR153W	PEX7	P39108	375 aa		5.74	□□□□□ -1.49
NUP53	YMR153W	SAS2	P40963	338 aa		5.74	□□□□□ -1.49
NUP53	YMR153W	YPL162C	Q12042	273 aa		5.74	□□□□□ -1.49
NUP53	YMR153W	GCN3	P14741	305 aa		5.74	□□□□□ -1.49
NUP53	YMR153W	SPO13	P23624	291 aa		5.74	□□□□□ -1.49
NUP53	YMR153W	YBL059W	P34224	193 aa		5.74	□□□□□ -1.49
NUP53	YMR153W	IZH1	Q03419	316 aa		5.74	□□□□□ -1.49
NUP53	YMR153W	YMR244W	Q04018	355 aa		5.74	□□□□□ -1.49
NUP53	YMR153W	ISU2	Q12056	156 aa		5.74	□□□□□ -1.49
NUP53	YMR153W	YDR157W	A0A023PZE8	133 aa		5.73	□□□□□ -1.49
NUP53	YMR153W	QCR9	P22289	66 aa		5.73	□□□□□ -1.49
NUP53	YMR153W	PRE9	P23638	258 aa	Known RBP	5.73	□□□□□ -1.49
NUP53	YMR153W	GNP1	P48813	663 aa		5.73	□□□□□ -1.49
NUP53	YMR153W	YGL194C-A	Q2V2P6	80 aa		5.73	□□□□□ -1.49
NUP53	YMR153W	YNL146C-A	Q3E7Z1	64 aa		5.73	□□□□□ -1.49
NUP53	YMR153W	RPS2	P25443	254 aa	Known RBP	5.72	□□□□□ -1.49
NUP53	YMR153W	CDC50	P25656	391 aa		5.72	□□□□□ -1.49
NUP53	YMR153W	PHD1	P36093	366 aa		5.72	□□□□□ -1.49
NUP53	YMR153W	TAD2	P47058	250 aa		5.72	□□□□□ -1.49
NUP53	YMR153W	AIM24	P47127	394 aa		5.72	□□□□□ -1.49
NUP53	YMR153W	ANT1	Q06497	328 aa		5.72	□□□□□ -1.49
NUP53	YMR153W	YOL160W	Q08321	113 aa		5.72	□□□□□ -1.49
NUP53	YMR153W	YER135C	P40082	130 aa		5.71	□□□□□ -1.5
NUP53	YMR153W	YNR066C	P53752	436 aa		5.71	□□□□□ -1.5
NUP53	YMR153W	MRPS17	Q03246	237 aa	Predicted RBP	5.71	□□□□□ -1.5
NUP53	YMR153W	MRPS8	Q03799	155 aa		5.71	□□□□□ -1.5
NUP53	YMR153W	STP4	Q07351	490 aa		5.71	□□□□□ -1.5
NUP53	YMR153W	UBI4	P0CG63	381 aa	Known RBP	5.7	□□□□□ -1.5
NUP53	YMR153W	AHT1	P29589	182 aa		5.7	□□□□□ -1.5
NUP53	YMR153W	MCM22	P47167	239 aa		5.7	□□□□□ -1.5
NUP53	YMR153W	JAC1	P53193	184 aa		5.7	□□□□□ -1.5
NUP53	YMR153W	AVO2	Q04749	426 aa		5.7	□□□□□ -1.5
NUP53	YMR153W	HSP12	P22943	109 aa	Known RBP	5.69	□□□□□ -1.5
NUP53	YMR153W	ASP1	P38986	381 aa	Predicted RBP	5.69	□□□□□ -1.5
NUP53	YMR153W	MIG3	P39943	394 aa		5.69	□□□□□ -1.5
NUP53	YMR153W	ATC1	Q04005	294 aa		5.69	□□□□□ -1.5
NUP53	YMR153W	LOA1	Q06508	300 aa		5.69	□□□□□ -1.5
NUP53	YMR153W	DDI2	P0CH63	225 aa		5.68	□□□□□ -1.5
NUP53	YMR153W	DDI3	P0CH64	225 aa		5.68	□□□□□ -1.5
NUP53	YMR153W	EMP24	P32803	203 aa	Known RBP	5.68	□□□□□ -1.5
NUP53	YMR153W	VMA22	P38784	181 aa		5.68	□□□□□ -1.5
NUP53	YMR153W	MBB1	P39534	108 aa		5.68	□□□□□ -1.5
NUP53	YMR153W	YFR035C	P43608	114 aa		5.68	□□□□□ -1.5
NUP53	YMR153W	SRB7	P47822	140 aa		5.68	□□□□□ -1.5
NUP53	YMR153W	DSK2	P48510	373 aa		5.68	□□□□□ -1.5
NUP53	YMR153W	YOR015W	Q12169	119 aa		5.68	□□□□□ -1.5
NUP53	YMR153W	RPB3	P16370	318 aa	Known RBP	5.67	□□□□□ -1.5
NUP53	YMR153W	GCV3	P39726	170 aa	Predicted RBP	5.67	□□□□□ -1.5
NUP53	YMR153W	PRE5	P40302	234 aa	Known RBP	5.67	□□□□□ -1.5
NUP53	YMR153W	RIB4	P50861	169 aa	Predicted RBP	5.67	□□□□□ -1.5
NUP53	YMR153W	ISU1	Q03020	165 aa		5.67	□□□□□ -1.5
NUP53	YMR153W	FIT2	Q08906	153 aa		5.67	□□□□□ -1.5
NUP53	YMR153W	ERV2	Q12284	196 aa		5.67	□□□□□ -1.5
NUP53	YMR153W	YPR145C-A	Q2V2P0	78 aa		5.67	□□□□□ -1.5
NUP53	YMR153W	YBR292C	P38357	123 aa		5.66	□□□□□ -1.5
NUP53	YMR153W	MRPL50	P53724	139 aa		5.66	□□□□□ -1.5
NUP53	YMR153W	HAL1	Q01766	294 aa		5.66	□□□□□ -1.5
NUP53	YMR153W	YPR063C	Q12160	140 aa		5.66	□□□□□ -1.5
NUP53	YMR153W	RPL2A	P0CX45	254 aa	Known RBP	5.65	□□□□□ -1.5
NUP53	YMR153W	RPL2B	P0CX46	254 aa	Known RBP	5.65	□□□□□ -1.5
NUP53	YMR153W	YCR001W	P25347	104 aa		5.65	□□□□□ -1.5
NUP53	YMR153W	ACP1	P32463	125 aa		5.65	□□□□□ -1.5
NUP53	YMR153W	AFR1	P33304	620 aa		5.65	□□□□□ -1.5
NUP53	YMR153W	CAF40	P53829	373 aa		5.65	□□□□□ -1.5
NUP53	YMR153W	YLR125W	Q12138	136 aa		5.65	□□□□□ -1.5
NUP53	YMR153W	TMA17	Q12513	150 aa		5.65	□□□□□ -1.5
NUP53	YMR153W	RPS11A	P0CX47	156 aa	Known RBP	5.65	□□□□□ -1.51
NUP53	YMR153W	RPS11B	P0CX48	156 aa	Known RBP	5.65	□□□□□ -1.51
NUP53	YMR153W	TRS20	P38334	175 aa		5.65	□□□□□ -1.51
NUP53	YMR153W	YHR022C	P38763	256 aa		5.65	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 42.6 ms